RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 SENP3Q9H4L4 574 aaPredicted RBP34.89■■■■□ 3.18
HOMER3-203ENST00000433218 SPHKAPQ2M3C7 1700 aa34.87■■■■□ 3.17
HOMER3-203ENST00000433218 CHD2O14647 1828 aaKnown RBP34.85■■■■□ 3.17
HOMER3-203ENST00000433218 SLC26A8Q96RN1 970 aa34.82■■■■□ 3.17
HOMER3-203ENST00000433218 SLC52A1Q9NWF4 448 aa34.81■■■■□ 3.16
HOMER3-203ENST00000433218 RIMS2Q9UQ26 1411 aa34.8■■■■□ 3.16
HOMER3-203ENST00000433218 RRBP1Q9P2E9 1410 aaKnown RBP34.79■■■■□ 3.16
HOMER3-203ENST00000433218 NUP155O75694 1391 aa34.76■■■■□ 3.16
HOMER3-203ENST00000433218 RBM33Q96EV2 1170 aaKnown RBP34.74■■■■□ 3.15
HOMER3-203ENST00000433218 TMEM94Q12767 1356 aa34.74■■■■□ 3.15
HOMER3-203ENST00000433218 NKTRP30414 1462 aaKnown RBP34.73■■■■□ 3.15
HOMER3-203ENST00000433218 ROBO1Q9Y6N7 1651 aa34.71■■■■□ 3.15
HOMER3-203ENST00000433218 PLEKHG1Q9ULL1 1385 aa34.71■■■■□ 3.15
HOMER3-203ENST00000433218 CLTCL1P53675 1640 aa34.69■■■■□ 3.14
HOMER3-203ENST00000433218 NRXN3Q9Y4C0 1643 aa34.69■■■■□ 3.14
HOMER3-203ENST00000433218 NUTM2DQ5VT03 806 aaPredicted RBP34.67■■■■□ 3.14
HOMER3-203ENST00000433218 CHGAP10645 457 aaKnown RBP34.66■■■■□ 3.14
HOMER3-203ENST00000433218 KCNA6P17658 529 aa34.66■■■■□ 3.14
HOMER3-203ENST00000433218 NAIPQ13075 1403 aa34.65■■■■□ 3.14
HOMER3-203ENST00000433218 ADAMTS13Q76LX8 1427 aa34.65■■■■□ 3.14
HOMER3-203ENST00000433218 DIP2AQ14689 1571 aa34.63■■■■□ 3.13
HOMER3-203ENST00000433218 BCANQ96GW7 911 aa34.62■■■■□ 3.13
HOMER3-203ENST00000433218 PPP1R15AO75807 674 aaPredicted RBP34.6■■■■□ 3.13
HOMER3-203ENST00000433218 KIF1BO60333 1816 aa34.57■■■■□ 3.13
HOMER3-203ENST00000433218 TRPM2O94759 1503 aa34.57■■■■□ 3.12
HOMER3-203ENST00000433218 PROSER2Q86WR7 435 aaPredicted RBP34.56■■■■□ 3.12
HOMER3-203ENST00000433218 SOCS7O14512 581 aa34.55■■■■□ 3.12
HOMER3-203ENST00000433218 XRN1Q8IZH2 1706 aaKnown RBP34.53■■■■□ 3.12
HOMER3-203ENST00000433218 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.53■■■■□ 3.12
HOMER3-203ENST00000433218 NEXMIFQ5QGS0 1516 aa34.52■■■■□ 3.12
HOMER3-203ENST00000433218 SETBP1Q9Y6X0 1596 aa34.51■■■■□ 3.11
HOMER3-203ENST00000433218 FAM135BQ49AJ0 1406 aa34.5■■■■□ 3.11
HOMER3-203ENST00000433218 PHLPP1O60346 1717 aa34.5■■■■□ 3.11
HOMER3-203ENST00000433218 PTPRUQ92729 1446 aa34.5■■■■□ 3.11
HOMER3-203ENST00000433218 HFM1A2PYH4 1435 aa34.48■■■■□ 3.11
HOMER3-203ENST00000433218 SETD1AO15047 1707 aaKnown RBP34.45■■■■□ 3.11
HOMER3-203ENST00000433218 MSH6P52701 1360 aa34.45■■■■□ 3.11
HOMER3-203ENST00000433218 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.45■■■■□ 3.11
HOMER3-203ENST00000433218 TBX22Q9Y458 520 aa34.44■■■■□ 3.1
HOMER3-203ENST00000433218 COL16A1Q07092 1604 aaPredicted RBP34.4■■■■□ 3.1
HOMER3-203ENST00000433218 HDGFP51858 240 aaKnown RBP34.38■■■■□ 3.09
HOMER3-203ENST00000433218 PPLO60437 1756 aa34.37■■■■□ 3.09
HOMER3-203ENST00000433218 NALCNQ8IZF0 1738 aa34.37■■■■□ 3.09
HOMER3-203ENST00000433218 PIK3R4Q99570 1358 aa34.36■■■■□ 3.09
HOMER3-203ENST00000433218 ZNF326Q5BKZ1 582 aaKnown RBP34.32■■■■□ 3.08
HOMER3-203ENST00000433218 PHF23Q9BUL5 403 aaPredicted RBP34.32■■■■□ 3.08
HOMER3-203ENST00000433218 METP08581 1390 aa34.31■■■■□ 3.08
HOMER3-203ENST00000433218 SLAIN2Q9P270 581 aa34.29■■■■□ 3.08
HOMER3-203ENST00000433218 NCOA3Q9Y6Q9 1424 aa34.28■■■■□ 3.08
HOMER3-203ENST00000433218 AMOTL2Q9Y2J4 779 aa34.28■■■■□ 3.08
HOMER3-203ENST00000433218 TRIM52Q96A61 297 aa34.27■■■■□ 3.08
HOMER3-203ENST00000433218 RGS17Q9UGC6 210 aaPredicted RBP34.26■■■■□ 3.07
HOMER3-203ENST00000433218 AHDC1Q5TGY3 1603 aaPredicted RBP34.26■■■■□ 3.07
HOMER3-203ENST00000433218 IFT172Q9UG01 1749 aa34.24■■■■□ 3.07
HOMER3-203ENST00000433218 C14orf37Q86TY3 774 aa34.24■■■■□ 3.07
HOMER3-203ENST00000433218 FOXD1Q16676 465 aa34.21■■■■□ 3.07
HOMER3-203ENST00000433218 SHPRHQ149N8 1683 aa34.2■■■■□ 3.06
HOMER3-203ENST00000433218 NHSL1Q5SYE7 1610 aa34.2■■■■□ 3.06
HOMER3-203ENST00000433218 SLC4A1APQ9BWU0 796 aaKnown RBP34.19■■■■□ 3.06
HOMER3-203ENST00000433218 LRP6O75581 1613 aa34.17■■■■□ 3.06
HOMER3-203ENST00000433218 ASXL1Q8IXJ9 1541 aa34.16■■■■□ 3.06
HOMER3-203ENST00000433218 DCCP43146 1447 aa34.14■■■■□ 3.06
HOMER3-203ENST00000433218 MST1RQ04912 1400 aa34.14■■■■□ 3.06
HOMER3-203ENST00000433218 C19orf44Q9H6X5 657 aa34.13■■■■□ 3.05
HOMER3-203ENST00000433218 ADGRL3Q9HAR2 1447 aa34.12■■■■□ 3.05
HOMER3-203ENST00000433218 JCADQ9P266 1359 aa34.1■■■■□ 3.05
HOMER3-203ENST00000433218 ATF3P18847 181 aa34.1■■■■□ 3.05
HOMER3-203ENST00000433218 CADPS2Q86UW7 1296 aa34.1■■■■□ 3.05
HOMER3-203ENST00000433218 BRINP3Q76B58 766 aa34.06■■■■□ 3.04
HOMER3-203ENST00000433218 PTCH1Q13635 1447 aa34.06■■■■□ 3.04
HOMER3-203ENST00000433218 ROBO2Q9HCK4 1378 aa34.04■■■■□ 3.04
HOMER3-203ENST00000433218 POTEAQ6S8J7 498 aa34.04■■■■□ 3.04
HOMER3-203ENST00000433218 SPATA31E1Q6ZUB1 1445 aa34.03■■■■□ 3.04
HOMER3-203ENST00000433218 CCDC144AA2RUR9 1427 aa34■■■■□ 3.03
HOMER3-203ENST00000433218 PRAG1Q86YV5 1406 aa33.99■■■■□ 3.03
HOMER3-203ENST00000433218 KNDC1Q76NI1 1749 aa33.97■■■■□ 3.03
HOMER3-203ENST00000433218 LAMC1P11047 1609 aa33.96■■■■□ 3.03
HOMER3-203ENST00000433218 DDX17Q92841 729 aaKnown RBP33.96■■■■□ 3.03
HOMER3-203ENST00000433218 MPHOSPH9Q99550 1183 aa33.96■■■■□ 3.03
HOMER3-203ENST00000433218 VGFO15240 615 aaPredicted RBP33.95■■■■□ 3.02
HOMER3-203ENST00000433218 ADGRF5Q8IZF2 1346 aa33.94■■■■□ 3.02
HOMER3-203ENST00000433218 RPGRIP1LQ68CZ1 1315 aa33.93■■■■□ 3.02
HOMER3-203ENST00000433218 C1orf167Q5SNV9 1468 aa33.91■■■■□ 3.02
HOMER3-203ENST00000433218 SETD5Q9C0A6 1442 aa33.9■■■■□ 3.02
HOMER3-203ENST00000433218 RGL3Q3MIN7 710 aa33.88■■■■□ 3.01
HOMER3-203ENST00000433218 CDC42BPGQ6DT37 1551 aa33.88■■■■□ 3.01
HOMER3-203ENST00000433218 PIK3C2GO75747 1445 aa33.86■■■■□ 3.01
HOMER3-203ENST00000433218 SPATA31A6Q5VVP1 1343 aa33.86■■■■□ 3.01
HOMER3-203ENST00000433218 RAB3GAP2Q9H2M9 1393 aa33.85■■■■□ 3.01
HOMER3-203ENST00000433218 PNPLA6Q8IY17 1366 aa33.79■■■■□ 3
HOMER3-203ENST00000433218 TECPR2O15040 1411 aa33.79■■■■□ 3
HOMER3-203ENST00000433218 FMN2Q9NZ56 1722 aa33.79■■■■□ 3
HOMER3-203ENST00000433218 RGPD8O14715 1765 aaPredicted RBP33.79■■■■□ 3
HOMER3-203ENST00000433218 NUTM2BA6NNL0 878 aaPredicted RBP33.78■■■■□ 3
HOMER3-203ENST00000433218 NUTM2EB1AL46 878 aaPredicted RBP33.78■■■■□ 3
HOMER3-203ENST00000433218 NUTM2AQ8IVF1 878 aaPredicted RBP33.78■■■■□ 3
HOMER3-203ENST00000433218 PLEKHH1Q9ULM0 1364 aa33.78■■■■□ 3
HOMER3-203ENST00000433218 MEX3CQ5U5Q3 659 aaKnown RBP33.77■■■■□ 3
HOMER3-203ENST00000433218 ORAI2Q96SN7 254 aa33.77■■■■□ 3
HOMER3-203ENST00000433218 ANKRD30BQ9BXX2 1392 aa33.77■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms