RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 RCCD1A6NED2 376 aa13.52□□□□□ -0.25
PTPRK-211ENST00000429595 TESPA1A2RU30 521 aaPredicted RBP13.51□□□□□ -0.25
PTPRK-211ENST00000429595 PRKD2Q9BZL6 878 aa13.5□□□□□ -0.25
PTPRK-211ENST00000429595 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.5□□□□□ -0.25
PTPRK-211ENST00000429595 UNC13AQ9UPW8 1703 aa13.5□□□□□ -0.25
PTPRK-211ENST00000429595 SLC4A3P48751 1232 aa13.49□□□□□ -0.25
PTPRK-211ENST00000429595 RBM26Q5T8P6 1007 aaKnown RBP13.48□□□□□ -0.25
PTPRK-211ENST00000429595 CC2D2AQ9P2K1 1620 aa13.48□□□□□ -0.25
PTPRK-211ENST00000429595 ZPR1O75312 459 aa13.47□□□□□ -0.25
PTPRK-211ENST00000429595 BLOC1S3Q6QNY0 202 aa13.47□□□□□ -0.25
PTPRK-211ENST00000429595 PCDHB3Q9Y5E6 796 aa13.47□□□□□ -0.25
PTPRK-211ENST00000429595 BICRAQ9NZM4 1560 aa13.46□□□□□ -0.25
PTPRK-211ENST00000429595 Q6ZNB5 142 aa13.45□□□□□ -0.26
PTPRK-211ENST00000429595 PXYLP1Q8TE99 480 aa13.45□□□□□ -0.26
PTPRK-211ENST00000429595 PRR14Q9BWN1 585 aa13.45□□□□□ -0.26
PTPRK-211ENST00000429595 GPR37O15354 613 aa13.44□□□□□ -0.26
PTPRK-211ENST00000429595 SLC10A3P09131 477 aa13.44□□□□□ -0.26
PTPRK-211ENST00000429595 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.42□□□□□ -0.26
PTPRK-211ENST00000429595 CFHP08603 1231 aa13.42□□□□□ -0.26
PTPRK-211ENST00000429595 FECHP22830 423 aa13.42□□□□□ -0.26
PTPRK-211ENST00000429595 HIC1Q14526 733 aa13.42□□□□□ -0.26
PTPRK-211ENST00000429595 V9GY48 417 aaPredicted RBP13.42□□□□□ -0.26
PTPRK-211ENST00000429595 LCE2BO14633 110 aa13.41□□□□□ -0.26
PTPRK-211ENST00000429595 TLL1O43897 1013 aa13.41□□□□□ -0.26
PTPRK-211ENST00000429595 ACTN4O43707 911 aaKnown RBP13.4□□□□□ -0.26
PTPRK-211ENST00000429595 METTL3Q86U44 580 aaKnown RBP13.4□□□□□ -0.26
PTPRK-211ENST00000429595 GFRA3O60609 400 aa13.39□□□□□ -0.27
PTPRK-211ENST00000429595 OATP04181 439 aa13.38□□□□□ -0.27
PTPRK-211ENST00000429595 KMT5BQ4FZB7 885 aa13.38□□□□□ -0.27
PTPRK-211ENST00000429595 KDM2AQ9Y2K7 1162 aa13.38□□□□□ -0.27
PTPRK-211ENST00000429595 HAP1P54257 671 aaPredicted RBP13.37□□□□□ -0.27
PTPRK-211ENST00000429595 LAPTM4AQ15012 233 aa13.37□□□□□ -0.27
PTPRK-211ENST00000429595 GNPATO15228 680 aa13.36□□□□□ -0.27
PTPRK-211ENST00000429595 GGCXP38435 758 aa13.36□□□□□ -0.27
PTPRK-211ENST00000429595 TMUB1Q9BVT8 246 aa13.36□□□□□ -0.27
PTPRK-211ENST00000429595 SMYD5Q6GMV2 418 aa13.35□□□□□ -0.27
PTPRK-211ENST00000429595 EMID1Q96A84 441 aaPredicted RBP13.35□□□□□ -0.27
PTPRK-211ENST00000429595 RNF223E7ERA6 249 aa13.34□□□□□ -0.27
PTPRK-211ENST00000429595 NRG2O14511 850 aaPredicted RBP13.31□□□□□ -0.28
PTPRK-211ENST00000429595 NLRP7Q8WX94 980 aa13.31□□□□□ -0.28
PTPRK-211ENST00000429595 S1PR4O95977 384 aa13.29□□□□□ -0.28
PTPRK-211ENST00000429595 PPEF1O14829 653 aaPredicted RBP13.28□□□□□ -0.28
PTPRK-211ENST00000429595 PHOX2BQ99453 314 aa13.28□□□□□ -0.28
PTPRK-211ENST00000429595 PUS10Q3MIT2 529 aaKnown RBP13.27□□□□□ -0.29
PTPRK-211ENST00000429595 SHROOM4Q9ULL8 1493 aa13.27□□□□□ -0.29
PTPRK-211ENST00000429595 EIF4G1Q04637 1599 aaKnown RBP13.26□□□□□ -0.29
PTPRK-211ENST00000429595 TRAF7Q6Q0C0 670 aa13.26□□□□□ -0.29
PTPRK-211ENST00000429595 NR1I2O75469 434 aa13.25□□□□□ -0.29
PTPRK-211ENST00000429595 ADH1BP00325 375 aa13.25□□□□□ -0.29
PTPRK-211ENST00000429595 DAXXQ9UER7 740 aaPredicted RBP13.25□□□□□ -0.29
PTPRK-211ENST00000429595 PDZRN3Q9UPQ7 1066 aa13.25□□□□□ -0.29
PTPRK-211ENST00000429595 CUX2O14529 1486 aa13.24□□□□□ -0.29
PTPRK-211ENST00000429595 SLC19A1P41440 591 aa13.24□□□□□ -0.29
PTPRK-211ENST00000429595 TRIM67Q6ZTA4 783 aa13.24□□□□□ -0.29
PTPRK-211ENST00000429595 GPIHBP1Q8IV16 184 aa13.24□□□□□ -0.29
PTPRK-211ENST00000429595 SCUBE3Q8IX30 993 aa13.24□□□□□ -0.29
PTPRK-211ENST00000429595 ANKLE1Q8NAG6 615 aa13.24□□□□□ -0.29
PTPRK-211ENST00000429595 LIAT1Q6ZQX7 453 aa13.21□□□□□ -0.29
PTPRK-211ENST00000429595 RDH13Q8NBN7 331 aa13.21□□□□□ -0.29
PTPRK-211ENST00000429595 DDX11L8A8MPP1 907 aa13.2□□□□□ -0.3
PTPRK-211ENST00000429595 RSPH4AQ5TD94 716 aa13.2□□□□□ -0.3
PTPRK-211ENST00000429595 PLA2G2CQ5R387 149 aa13.19□□□□□ -0.3
PTPRK-211ENST00000429595 SPRYD7Q5W111 196 aa13.19□□□□□ -0.3
PTPRK-211ENST00000429595 SLC6A16Q9GZN6 736 aa13.19□□□□□ -0.3
PTPRK-211ENST00000429595 MORN1Q5T089 497 aa13.18□□□□□ -0.3
PTPRK-211ENST00000429595 MYO15BQ96JP2 1530 aa13.18□□□□□ -0.3
PTPRK-211ENST00000429595 FUT2Q10981 343 aa13.17□□□□□ -0.3
PTPRK-211ENST00000429595 ZNF598Q86UK7 904 aaKnown RBP13.15□□□□□ -0.3
PTPRK-211ENST00000429595 SPSB2Q99619 263 aa13.15□□□□□ -0.3
PTPRK-211ENST00000429595 GCGRP47871 477 aa13.14□□□□□ -0.31
PTPRK-211ENST00000429595 THAP11Q96EK4 314 aa13.14□□□□□ -0.31
PTPRK-211ENST00000429595 ATP6V1AP38606 617 aa13.11□□□□□ -0.31
PTPRK-211ENST00000429595 ZNF697Q5TEC3 545 aa13.11□□□□□ -0.31
PTPRK-211ENST00000429595 SULF1Q8IWU6 871 aa13.11□□□□□ -0.31
PTPRK-211ENST00000429595 SLC27A5Q9Y2P5 690 aa13.11□□□□□ -0.31
PTPRK-211ENST00000429595 ERCC6Q03468 1493 aa13.1□□□□□ -0.31
PTPRK-211ENST00000429595 VSIG10Q8N0Z9 540 aa13.1□□□□□ -0.31
PTPRK-211ENST00000429595 PRR20EP86478 221 aa13.09□□□□□ -0.31
PTPRK-211ENST00000429595 PRR20CP86479 221 aa13.09□□□□□ -0.31
PTPRK-211ENST00000429595 PRR20DP86480 221 aa13.09□□□□□ -0.31
PTPRK-211ENST00000429595 PRR20BP86481 221 aa13.09□□□□□ -0.31
PTPRK-211ENST00000429595 PRR20AP86496 221 aa13.09□□□□□ -0.31
PTPRK-211ENST00000429595 GDF9O60383 454 aa13.08□□□□□ -0.32
PTPRK-211ENST00000429595 MAP2K5Q13163 448 aa13.08□□□□□ -0.32
PTPRK-211ENST00000429595 FAM160A2Q8N612 972 aaPredicted RBP13.08□□□□□ -0.32
PTPRK-211ENST00000429595 PRDM9Q9NQV7 894 aa13.06□□□□□ -0.32
PTPRK-211ENST00000429595 TNFRSF10AO00220 468 aa13.05□□□□□ -0.32
PTPRK-211ENST00000429595 FMNL1O95466 1100 aaPredicted RBP13.04□□□□□ -0.32
PTPRK-211ENST00000429595 CD46P15529 392 aa13.04□□□□□ -0.32
PTPRK-211ENST00000429595 BRICD5Q6PL45 260 aa13.04□□□□□ -0.32
PTPRK-211ENST00000429595 RNF19BQ6ZMZ0 732 aa13.04□□□□□ -0.32
PTPRK-211ENST00000429595 FCF1Q9Y324 198 aaKnown RBP13.04□□□□□ -0.32
PTPRK-211ENST00000429595 IRF6O14896 467 aa13.03□□□□□ -0.32
PTPRK-211ENST00000429595 SALL2Q9Y467 1007 aaPredicted RBP13.02□□□□□ -0.33
PTPRK-211ENST00000429595 MYT1Q01538 1121 aa13.01□□□□□ -0.33
PTPRK-211ENST00000429595 PKD2L1Q9P0L9 805 aa13.01□□□□□ -0.33
PTPRK-211ENST00000429595 DGAT1O75907 488 aa12.99□□□□□ -0.33
PTPRK-211ENST00000429595 MDM2Q00987 491 aaPredicted RBP12.99□□□□□ -0.33
PTPRK-211ENST00000429595 PKDCCQ504Y2 493 aa12.99□□□□□ -0.33
PTPRK-211ENST00000429595 MINK1Q8N4C8 1332 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms