RNA–Protein interactions for RNA: ENST00000427463.5

PCGF3-204, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-204ENST00000427463 SLC26A8Q96RN1 970 aa32.16■■■□□ 2.74
PCGF3-204ENST00000427463 NUP155O75694 1391 aa32.15■■■□□ 2.74
PCGF3-204ENST00000427463 RRBP1Q9P2E9 1410 aaKnown RBP32.14■■■□□ 2.74
PCGF3-204ENST00000427463 RIMS2Q9UQ26 1411 aa32.14■■■□□ 2.74
PCGF3-204ENST00000427463 MED1Q15648 1581 aaPredicted RBP32.12■■■□□ 2.73
PCGF3-204ENST00000427463 PLEKHG1Q9ULL1 1385 aa32.11■■■□□ 2.73
PCGF3-204ENST00000427463 KCNA6P17658 529 aa32.11■■■□□ 2.73
PCGF3-204ENST00000427463 NKTRP30414 1462 aaKnown RBP32.1■■■□□ 2.73
PCGF3-204ENST00000427463 CHD2O14647 1828 aaKnown RBP32.1■■■□□ 2.73
PCGF3-204ENST00000427463 SPHKAPQ2M3C7 1700 aa32.09■■■□□ 2.73
PCGF3-204ENST00000427463 TMEM94Q12767 1356 aa32.08■■■□□ 2.73
PCGF3-204ENST00000427463 BCANQ96GW7 911 aa32.05■■■□□ 2.72
PCGF3-204ENST00000427463 PPP1R15AO75807 674 aaPredicted RBP32.04■■■□□ 2.72
PCGF3-204ENST00000427463 CHGAP10645 457 aaKnown RBP32.03■■■□□ 2.72
PCGF3-204ENST00000427463 HDGFP51858 240 aaKnown RBP32.03■■■□□ 2.72
PCGF3-204ENST00000427463 SENP3Q9H4L4 574 aaPredicted RBP32.03■■■□□ 2.72
PCGF3-204ENST00000427463 PROSER2Q86WR7 435 aaPredicted RBP32■■■□□ 2.71
PCGF3-204ENST00000427463 SOCS7O14512 581 aa31.99■■■□□ 2.71
PCGF3-204ENST00000427463 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.99■■■□□ 2.71
PCGF3-204ENST00000427463 DIP2AQ14689 1571 aa31.98■■■□□ 2.71
PCGF3-204ENST00000427463 RBM33Q96EV2 1170 aaKnown RBP31.98■■■□□ 2.71
PCGF3-204ENST00000427463 NAIPQ13075 1403 aa31.98■■■□□ 2.71
PCGF3-204ENST00000427463 ADAMTS13Q76LX8 1427 aa31.97■■■□□ 2.71
PCGF3-204ENST00000427463 FAM135BQ49AJ0 1406 aa31.94■■■□□ 2.7
PCGF3-204ENST00000427463 NUTM2DQ5VT03 806 aaPredicted RBP31.94■■■□□ 2.7
PCGF3-204ENST00000427463 TBX22Q9Y458 520 aa31.94■■■□□ 2.7
PCGF3-204ENST00000427463 ROBO1Q9Y6N7 1651 aa31.94■■■□□ 2.7
PCGF3-204ENST00000427463 CLTCL1P53675 1640 aa31.9■■■□□ 2.7
PCGF3-204ENST00000427463 MSH6P52701 1360 aa31.89■■■□□ 2.7
PCGF3-204ENST00000427463 TRPM2O94759 1503 aa31.89■■■□□ 2.7
PCGF3-204ENST00000427463 NRXN3Q9Y4C0 1643 aa31.88■■■□□ 2.69
PCGF3-204ENST00000427463 HFM1A2PYH4 1435 aa31.87■■■□□ 2.69
PCGF3-204ENST00000427463 PIK3R4Q99570 1358 aa31.86■■■□□ 2.69
PCGF3-204ENST00000427463 KIF1BO60333 1816 aa31.84■■■□□ 2.69
PCGF3-204ENST00000427463 SETBP1Q9Y6X0 1596 aa31.84■■■□□ 2.69
PCGF3-204ENST00000427463 NCOA3Q9Y6Q9 1424 aa31.82■■■□□ 2.68
PCGF3-204ENST00000427463 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.79■■■□□ 2.68
PCGF3-204ENST00000427463 NEXMIFQ5QGS0 1516 aa31.79■■■□□ 2.68
PCGF3-204ENST00000427463 XRN1Q8IZH2 1706 aaKnown RBP31.78■■■□□ 2.68
PCGF3-204ENST00000427463 PTPRUQ92729 1446 aa31.78■■■□□ 2.68
PCGF3-204ENST00000427463 PHF23Q9BUL5 403 aaPredicted RBP31.77■■■□□ 2.68
PCGF3-204ENST00000427463 PHLPP1O60346 1717 aa31.75■■■□□ 2.67
PCGF3-204ENST00000427463 ZNF326Q5BKZ1 582 aaKnown RBP31.75■■■□□ 2.67
PCGF3-204ENST00000427463 SLAIN2Q9P270 581 aa31.75■■■□□ 2.67
PCGF3-204ENST00000427463 TRIM52Q96A61 297 aa31.71■■■□□ 2.67
PCGF3-204ENST00000427463 AMOTL2Q9Y2J4 779 aa31.71■■■□□ 2.67
PCGF3-204ENST00000427463 C14orf37Q86TY3 774 aa31.69■■■□□ 2.66
PCGF3-204ENST00000427463 C19orf44Q9H6X5 657 aa31.67■■■□□ 2.66
PCGF3-204ENST00000427463 METP08581 1390 aa31.67■■■□□ 2.66
PCGF3-204ENST00000427463 COL16A1Q07092 1604 aaPredicted RBP31.66■■■□□ 2.66
PCGF3-204ENST00000427463 SLC4A1APQ9BWU0 796 aaKnown RBP31.65■■■□□ 2.66
PCGF3-204ENST00000427463 CADPS2Q86UW7 1296 aa31.64■■■□□ 2.66
PCGF3-204ENST00000427463 SETD1AO15047 1707 aaKnown RBP31.63■■■□□ 2.65
PCGF3-204ENST00000427463 PPLO60437 1756 aa31.62■■■□□ 2.65
PCGF3-204ENST00000427463 DCCP43146 1447 aa31.61■■■□□ 2.65
PCGF3-204ENST00000427463 ATF3P18847 181 aa31.61■■■□□ 2.65
PCGF3-204ENST00000427463 RGS17Q9UGC6 210 aaPredicted RBP31.6■■■□□ 2.65
PCGF3-204ENST00000427463 AHDC1Q5TGY3 1603 aaPredicted RBP31.6■■■□□ 2.65
PCGF3-204ENST00000427463 NALCNQ8IZF0 1738 aa31.57■■■□□ 2.64
PCGF3-204ENST00000427463 JCADQ9P266 1359 aa31.56■■■□□ 2.64
PCGF3-204ENST00000427463 VGFO15240 615 aaPredicted RBP31.52■■■□□ 2.64
PCGF3-204ENST00000427463 FOXD1Q16676 465 aa31.52■■■□□ 2.64
PCGF3-204ENST00000427463 RPGRIP1LQ68CZ1 1315 aa31.51■■■□□ 2.64
PCGF3-204ENST00000427463 ADGRL3Q9HAR2 1447 aa31.51■■■□□ 2.64
PCGF3-204ENST00000427463 SHPRHQ149N8 1683 aa31.51■■■□□ 2.63
PCGF3-204ENST00000427463 MST1RQ04912 1400 aa31.5■■■□□ 2.63
PCGF3-204ENST00000427463 ASXL1Q8IXJ9 1541 aa31.49■■■□□ 2.63
PCGF3-204ENST00000427463 BRINP3Q76B58 766 aa31.48■■■□□ 2.63
PCGF3-204ENST00000427463 PTCH1Q13635 1447 aa31.48■■■□□ 2.63
PCGF3-204ENST00000427463 NHSL1Q5SYE7 1610 aa31.47■■■□□ 2.63
PCGF3-204ENST00000427463 IFT172Q9UG01 1749 aa31.46■■■□□ 2.63
PCGF3-204ENST00000427463 CCDC144AA2RUR9 1427 aa31.46■■■□□ 2.63
PCGF3-204ENST00000427463 PRAG1Q86YV5 1406 aa31.45■■■□□ 2.63
PCGF3-204ENST00000427463 MPHOSPH9Q99550 1183 aa31.43■■■□□ 2.62
PCGF3-204ENST00000427463 LRP6O75581 1613 aa31.42■■■□□ 2.62
PCGF3-204ENST00000427463 SPATA31E1Q6ZUB1 1445 aa31.41■■■□□ 2.62
PCGF3-204ENST00000427463 ROBO2Q9HCK4 1378 aa31.41■■■□□ 2.62
PCGF3-204ENST00000427463 POTEAQ6S8J7 498 aa31.4■■■□□ 2.62
PCGF3-204ENST00000427463 SPATA31A6Q5VVP1 1343 aa31.4■■■□□ 2.62
PCGF3-204ENST00000427463 SETD5Q9C0A6 1442 aa31.35■■■□□ 2.61
PCGF3-204ENST00000427463 ADGRF5Q8IZF2 1346 aa31.33■■■□□ 2.61
PCGF3-204ENST00000427463 C1orf167Q5SNV9 1468 aa31.32■■■□□ 2.6
PCGF3-204ENST00000427463 LAMC1P11047 1609 aa31.31■■■□□ 2.6
PCGF3-204ENST00000427463 RGL3Q3MIN7 710 aa31.31■■■□□ 2.6
PCGF3-204ENST00000427463 ANKRD30BQ9BXX2 1392 aa31.3■■■□□ 2.6
PCGF3-204ENST00000427463 ACIN1Q9UKV3 1341 aaKnown RBP31.3■■■□□ 2.6
PCGF3-204ENST00000427463 KNDC1Q76NI1 1749 aa31.27■■■□□ 2.6
PCGF3-204ENST00000427463 PIK3C2GO75747 1445 aa31.26■■■□□ 2.6
PCGF3-204ENST00000427463 DDX17Q92841 729 aaKnown RBP31.26■■■□□ 2.59
PCGF3-204ENST00000427463 CDC42BPGQ6DT37 1551 aa31.26■■■□□ 2.59
PCGF3-204ENST00000427463 MEX3CQ5U5Q3 659 aaKnown RBP31.25■■■□□ 2.59
PCGF3-204ENST00000427463 RAB3GAP2Q9H2M9 1393 aa31.25■■■□□ 2.59
PCGF3-204ENST00000427463 TECPR2O15040 1411 aa31.24■■■□□ 2.59
PCGF3-204ENST00000427463 LRRC59Q96AG4 307 aaKnown RBP31.22■■■□□ 2.59
PCGF3-204ENST00000427463 LRPPRCP42704 1394 aaKnown RBP31.19■■■□□ 2.58
PCGF3-204ENST00000427463 PNPLA6Q8IY17 1366 aa31.19■■■□□ 2.58
PCGF3-204ENST00000427463 NUTM2BA6NNL0 878 aaPredicted RBP31.18■■■□□ 2.58
PCGF3-204ENST00000427463 NUTM2EB1AL46 878 aaPredicted RBP31.18■■■□□ 2.58
PCGF3-204ENST00000427463 NUTM2AQ8IVF1 878 aaPredicted RBP31.18■■■□□ 2.58
PCGF3-204ENST00000427463 ORAI2Q96SN7 254 aa31.18■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms