RNA–Protein interactions for RNA: ENST00000426150.5

SSBP3-207, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 851 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-207ENST00000426150 TATDN2Q93075 761 aa11.26□□□□□ -0.61
SSBP3-207ENST00000426150 FBXO31Q5XUX0 539 aaPredicted RBP11.25□□□□□ -0.61
SSBP3-207ENST00000426150 PROSER2Q86WR7 435 aaPredicted RBP11.25□□□□□ -0.61
SSBP3-207ENST00000426150 BANK1Q8NDB2 785 aa11.25□□□□□ -0.61
SSBP3-207ENST00000426150 POM121Q96HA1 1249 aa11.25□□□□□ -0.61
SSBP3-207ENST00000426150 PNMA3Q9UL41 463 aa11.25□□□□□ -0.61
SSBP3-207ENST00000426150 DDX11L8A8MPP1 907 aa11.24□□□□□ -0.61
SSBP3-207ENST00000426150 RAD21O60216 631 aa11.24□□□□□ -0.61
SSBP3-207ENST00000426150 HOXB1P14653 301 aaPredicted RBP11.24□□□□□ -0.61
SSBP3-207ENST00000426150 PPP2R2DQ66LE6 453 aa11.24□□□□□ -0.61
SSBP3-207ENST00000426150 PACS2Q86VP3 889 aa11.24□□□□□ -0.61
SSBP3-207ENST00000426150 TMEM134Q9H6X4 195 aa11.24□□□□□ -0.61
SSBP3-207ENST00000426150 SPTLC1O15269 473 aa11.23□□□□□ -0.61
SSBP3-207ENST00000426150 TUSC1Q2TAM9 212 aa11.23□□□□□ -0.61
SSBP3-207ENST00000426150 NUTM1Q86Y26 1132 aa11.23□□□□□ -0.61
SSBP3-207ENST00000426150 SNPHO15079 494 aa11.22□□□□□ -0.61
SSBP3-207ENST00000426150 TMEM259Q4ZIN3 620 aa11.22□□□□□ -0.61
SSBP3-207ENST00000426150 FNBP4Q8N3X1 1017 aaPredicted RBP11.22□□□□□ -0.61
SSBP3-207ENST00000426150 SNRKQ9NRH2 765 aa11.22□□□□□ -0.61
SSBP3-207ENST00000426150 RSBN1LQ6PCB5 846 aaPredicted RBP11.21□□□□□ -0.61
SSBP3-207ENST00000426150 CCDC82Q8N4S0 544 aa11.21□□□□□ -0.61
SSBP3-207ENST00000426150 PROX2Q3B8N5 592 aa11.2□□□□□ -0.62
SSBP3-207ENST00000426150 COG6Q9Y2V7 657 aa11.2□□□□□ -0.62
SSBP3-207ENST00000426150 MOXD2PA6NHM9 499 aa11.19□□□□□ -0.62
SSBP3-207ENST00000426150 SMAPO00193 183 aa11.19□□□□□ -0.62
SSBP3-207ENST00000426150 KCNK17Q96T54 332 aa11.19□□□□□ -0.62
SSBP3-207ENST00000426150 GJA5P36382 358 aa11.18□□□□□ -0.62
SSBP3-207ENST00000426150 ZNF777Q9ULD5 760 aaPredicted RBP11.18□□□□□ -0.62
SSBP3-207ENST00000426150 NDUFV2P19404 249 aa11.16□□□□□ -0.62
SSBP3-207ENST00000426150 CSPP1Q1MSJ5 1256 aa11.16□□□□□ -0.62
SSBP3-207ENST00000426150 RDH13Q8NBN7 331 aa11.16□□□□□ -0.62
SSBP3-207ENST00000426150 QPCTQ16769 361 aa11.15□□□□□ -0.62
SSBP3-207ENST00000426150 LILRB3O75022 631 aa11.14□□□□□ -0.63
SSBP3-207ENST00000426150 MTMR14Q8NCE2 650 aa11.14□□□□□ -0.63
SSBP3-207ENST00000426150 KCNH8Q96L42 1107 aa11.14□□□□□ -0.63
SSBP3-207ENST00000426150 PCDHB15Q9Y5E8 787 aa11.14□□□□□ -0.63
SSBP3-207ENST00000426150 KDM4AO75164 1064 aa11.13□□□□□ -0.63
SSBP3-207ENST00000426150 ZBED2Q9BTP6 218 aa11.13□□□□□ -0.63
SSBP3-207ENST00000426150 KIAA1468Q9P260 1216 aa11.13□□□□□ -0.63
SSBP3-207ENST00000426150 ST18O60284 1047 aa11.11□□□□□ -0.63
SSBP3-207ENST00000426150 USP46P62068 366 aa11.11□□□□□ -0.63
SSBP3-207ENST00000426150 RTL5Q5HYW3 569 aaPredicted RBP11.11□□□□□ -0.63
SSBP3-207ENST00000426150 SOCS7O14512 581 aa11.1□□□□□ -0.63
SSBP3-207ENST00000426150 GCGRP47871 477 aa11.1□□□□□ -0.63
SSBP3-207ENST00000426150 RSPH4AQ5TD94 716 aa11.1□□□□□ -0.63
SSBP3-207ENST00000426150 AP1G2O75843 785 aa11.09□□□□□ -0.63
SSBP3-207ENST00000426150 PRPF38BQ5VTL8 546 aaKnown RBP11.09□□□□□ -0.63
SSBP3-207ENST00000426150 CABLES1Q8TDN4 633 aa11.09□□□□□ -0.63
SSBP3-207ENST00000426150 GDPD2Q9HCC8 539 aa11.09□□□□□ -0.63
SSBP3-207ENST00000426150 ZNF330Q9Y3S2 320 aaPredicted RBP11.09□□□□□ -0.63
SSBP3-207ENST00000426150 NUTM2BA6NNL0 878 aaPredicted RBP11.08□□□□□ -0.64
SSBP3-207ENST00000426150 NUTM2EB1AL46 878 aaPredicted RBP11.08□□□□□ -0.64
SSBP3-207ENST00000426150 HOXA2O43364 376 aa11.08□□□□□ -0.64
SSBP3-207ENST00000426150 PSEN2P49810 448 aa11.08□□□□□ -0.64
SSBP3-207ENST00000426150 LCE2DQ5TA82 110 aaPredicted RBP11.08□□□□□ -0.64
SSBP3-207ENST00000426150 NUTM2DQ5VT03 806 aaPredicted RBP11.08□□□□□ -0.64
SSBP3-207ENST00000426150 NUTM2AQ8IVF1 878 aaPredicted RBP11.08□□□□□ -0.64
SSBP3-207ENST00000426150 CCDC97Q96F63 343 aaPredicted RBP11.08□□□□□ -0.64
SSBP3-207ENST00000426150 SERPINA10Q9UK55 444 aa11.08□□□□□ -0.64
SSBP3-207ENST00000426150 SLC10A3P09131 477 aa11.07□□□□□ -0.64
SSBP3-207ENST00000426150 SWT1Q5T5J6 900 aaKnown RBP11.07□□□□□ -0.64
SSBP3-207ENST00000426150 POTEEQ6S8J3 1075 aa11.07□□□□□ -0.64
SSBP3-207ENST00000426150 PLSCR2Q9NRY7 297 aa11.07□□□□□ -0.64
SSBP3-207ENST00000426150 RABGEF1Q9UJ41 708 aa11.07□□□□□ -0.64
SSBP3-207ENST00000426150 USP17L8P0C7I0 530 aa11.06□□□□□ -0.64
SSBP3-207ENST00000426150 FDX1P10109 184 aa11.06□□□□□ -0.64
SSBP3-207ENST00000426150 ZBTB3Q9H5J0 574 aa11.06□□□□□ -0.64
SSBP3-207ENST00000426150 HRCP23327 699 aa11.05□□□□□ -0.64
SSBP3-207ENST00000426150 PODXL2Q9NZ53 605 aa11.05□□□□□ -0.64
SSBP3-207ENST00000426150 SEPT9Q9UHD8 586 aaPredicted RBP11.05□□□□□ -0.64
SSBP3-207ENST00000426150 TRIM26Q12899 539 aaPredicted RBP11.04□□□□□ -0.64
SSBP3-207ENST00000426150 SLC4A5Q9BY07 1137 aa11.04□□□□□ -0.64
SSBP3-207ENST00000426150 PRM3Q9NNZ6 103 aa11.04□□□□□ -0.64
SSBP3-207ENST00000426150 PCDHGC3Q9UN70 934 aa11.04□□□□□ -0.64
SSBP3-207ENST00000426150 CCDC180Q9P1Z9 1646 aa11.04□□□□□ -0.64
SSBP3-207ENST00000426150 POTEB3A0JP26 581 aa11.03□□□□□ -0.64
SSBP3-207ENST00000426150 ARHGAP33O14559 1287 aa11.03□□□□□ -0.64
SSBP3-207ENST00000426150 ABL2P42684 1182 aa11.03□□□□□ -0.64
SSBP3-207ENST00000426150 POTEBQ6S5H4 581 aa11.03□□□□□ -0.64
SSBP3-207ENST00000426150 WWC1Q8IX03 1113 aa11.03□□□□□ -0.64
SSBP3-207ENST00000426150 MARVELD3Q96A59 401 aa11.03□□□□□ -0.64
SSBP3-207ENST00000426150 TBC1D2BQ9UPU7 963 aa11.03□□□□□ -0.64
SSBP3-207ENST00000426150 GUCA2AQ02747 115 aa11.02□□□□□ -0.65
SSBP3-207ENST00000426150 VARS2Q5ST30 1063 aaKnown RBP11.02□□□□□ -0.65
SSBP3-207ENST00000426150 HLA-CQ95604 372 aa11.02□□□□□ -0.65
SSBP3-207ENST00000426150 ERBB3P21860 1342 aa11.01□□□□□ -0.65
SSBP3-207ENST00000426150 HDGFP51858 240 aaKnown RBP11□□□□□ -0.65
SSBP3-207ENST00000426150 FAM98CQ17RN3 349 aaKnown RBP11□□□□□ -0.65
SSBP3-207ENST00000426150 DMRTA1Q5VZB9 504 aa11□□□□□ -0.65
SSBP3-207ENST00000426150 PDIA4P13667 645 aaKnown RBP10.99□□□□□ -0.65
SSBP3-207ENST00000426150 SLC4A3P48751 1232 aa10.99□□□□□ -0.65
SSBP3-207ENST00000426150 GJD4Q96KN9 370 aaPredicted RBP10.99□□□□□ -0.65
SSBP3-207ENST00000426150 AXIN2Q9Y2T1 843 aa10.99□□□□□ -0.65
SSBP3-207ENST00000426150 EMP3P54852 163 aa10.97□□□□□ -0.65
SSBP3-207ENST00000426150 CTDSPL2Q05D32 466 aa10.97□□□□□ -0.65
SSBP3-207ENST00000426150 MTMR2Q13614 643 aa10.97□□□□□ -0.65
SSBP3-207ENST00000426150 SLF2Q8IX21 1173 aa10.97□□□□□ -0.65
SSBP3-207ENST00000426150 FAM163AQ96GL9 167 aaPredicted RBP10.97□□□□□ -0.65
SSBP3-207ENST00000426150 VPS9D1Q9Y2B5 631 aa10.97□□□□□ -0.65
SSBP3-207ENST00000426150 POM121CA8CG34 1229 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms