RNA–Protein interactions for RNA: ENST00000421359.5

TTC38-203, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 4

Gene TTC38, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-203ENST00000421359 ILDR2Q71H61 639 aa23.71■■□□□ 1.39
TTC38-203ENST00000421359 PHF23Q9BUL5 403 aaPredicted RBP23.7■■□□□ 1.38
TTC38-203ENST00000421359 IQGAP3Q86VI3 1631 aa23.7■■□□□ 1.38
TTC38-203ENST00000421359 PLEKHG1Q9ULL1 1385 aa23.69■■□□□ 1.38
TTC38-203ENST00000421359 NKTRP30414 1462 aaKnown RBP23.68■■□□□ 1.38
TTC38-203ENST00000421359 RIMS2Q9UQ26 1411 aa23.68■■□□□ 1.38
TTC38-203ENST00000421359 TMEM94Q12767 1356 aa23.67■■□□□ 1.38
TTC38-203ENST00000421359 PPARGC1BQ86YN6 1023 aaKnown RBP23.66■■□□□ 1.38
TTC38-203ENST00000421359 MSH6P52701 1360 aa23.65■■□□□ 1.38
TTC38-203ENST00000421359 E9PCH4 1651 aa23.64■■□□□ 1.38
TTC38-203ENST00000421359 TMEM131LA2VDJ0 1609 aa23.64■■□□□ 1.38
TTC38-203ENST00000421359 TBX22Q9Y458 520 aa23.64■■□□□ 1.37
TTC38-203ENST00000421359 ZFYVE9O95405 1425 aa23.64■■□□□ 1.37
TTC38-203ENST00000421359 MED1Q15648 1581 aaPredicted RBP23.63■■□□□ 1.37
TTC38-203ENST00000421359 SENP3Q9H4L4 574 aaPredicted RBP23.62■■□□□ 1.37
TTC38-203ENST00000421359 ALKQ9UM73 1620 aa23.62■■□□□ 1.37
TTC38-203ENST00000421359 FAM135BQ49AJ0 1406 aa23.61■■□□□ 1.37
TTC38-203ENST00000421359 NWD1Q149M9 1564 aa23.6■■□□□ 1.37
TTC38-203ENST00000421359 MYO5BQ9ULV0 1848 aa23.59■■□□□ 1.37
TTC38-203ENST00000421359 C14orf37Q86TY3 774 aa23.59■■□□□ 1.37
TTC38-203ENST00000421359 DIP2AQ14689 1571 aa23.58■■□□□ 1.37
TTC38-203ENST00000421359 PIK3R4Q99570 1358 aa23.58■■□□□ 1.37
TTC38-203ENST00000421359 XIRP1Q702N8 1843 aaKnown RBP23.58■■□□□ 1.37
TTC38-203ENST00000421359 RRBP1Q9P2E9 1410 aaKnown RBP23.58■■□□□ 1.36
TTC38-203ENST00000421359 NCOA3Q9Y6Q9 1424 aa23.58■■□□□ 1.36
TTC38-203ENST00000421359 ZNF326Q5BKZ1 582 aaKnown RBP23.55■■□□□ 1.36
TTC38-203ENST00000421359 CHD2O14647 1828 aaKnown RBP23.54■■□□□ 1.36
TTC38-203ENST00000421359 SLAIN2Q9P270 581 aa23.52■■□□□ 1.36
TTC38-203ENST00000421359 SPHKAPQ2M3C7 1700 aa23.51■■□□□ 1.35
TTC38-203ENST00000421359 NUTM2DQ5VT03 806 aaPredicted RBP23.51■■□□□ 1.35
TTC38-203ENST00000421359 TRPM2O94759 1503 aa23.5■■□□□ 1.35
TTC38-203ENST00000421359 ATF3P18847 181 aa23.5■■□□□ 1.35
TTC38-203ENST00000421359 CADPS2Q86UW7 1296 aa23.5■■□□□ 1.35
TTC38-203ENST00000421359 TRIM52Q96A61 297 aa23.49■■□□□ 1.35
TTC38-203ENST00000421359 RBM33Q96EV2 1170 aaKnown RBP23.49■■□□□ 1.35
TTC38-203ENST00000421359 C19orf44Q9H6X5 657 aa23.48■■□□□ 1.35
TTC38-203ENST00000421359 ROBO1Q9Y6N7 1651 aa23.47■■□□□ 1.35
TTC38-203ENST00000421359 NAIPQ13075 1403 aa23.46■■□□□ 1.35
TTC38-203ENST00000421359 ADAMTS13Q76LX8 1427 aa23.46■■□□□ 1.35
TTC38-203ENST00000421359 AMOTL2Q9Y2J4 779 aa23.44■■□□□ 1.34
TTC38-203ENST00000421359 ACIN1Q9UKV3 1341 aaKnown RBP23.43■■□□□ 1.34
TTC38-203ENST00000421359 HFM1A2PYH4 1435 aa23.42■■□□□ 1.34
TTC38-203ENST00000421359 SLC4A1APQ9BWU0 796 aaKnown RBP23.41■■□□□ 1.34
TTC38-203ENST00000421359 VGFO15240 615 aaPredicted RBP23.4■■□□□ 1.34
TTC38-203ENST00000421359 KIF1BO60333 1816 aa23.4■■□□□ 1.34
TTC38-203ENST00000421359 SETBP1Q9Y6X0 1596 aa23.39■■□□□ 1.33
TTC38-203ENST00000421359 JCADQ9P266 1359 aa23.39■■□□□ 1.33
TTC38-203ENST00000421359 PHLPP1O60346 1717 aa23.37■■□□□ 1.33
TTC38-203ENST00000421359 RPGRIP1LQ68CZ1 1315 aa23.36■■□□□ 1.33
TTC38-203ENST00000421359 DCCP43146 1447 aa23.35■■□□□ 1.33
TTC38-203ENST00000421359 CLTCL1P53675 1640 aa23.33■■□□□ 1.33
TTC38-203ENST00000421359 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.33■■□□□ 1.32
TTC38-203ENST00000421359 SPATA31A6Q5VVP1 1343 aa23.31■■□□□ 1.32
TTC38-203ENST00000421359 NEXMIFQ5QGS0 1516 aa23.29■■□□□ 1.32
TTC38-203ENST00000421359 PTPRUQ92729 1446 aa23.29■■□□□ 1.32
TTC38-203ENST00000421359 MEX3CQ5U5Q3 659 aaKnown RBP23.28■■□□□ 1.32
TTC38-203ENST00000421359 NRXN3Q9Y4C0 1643 aa23.27■■□□□ 1.32
TTC38-203ENST00000421359 XRN1Q8IZH2 1706 aaKnown RBP23.27■■□□□ 1.32
TTC38-203ENST00000421359 METP08581 1390 aa23.27■■□□□ 1.31
TTC38-203ENST00000421359 CCDC144AA2RUR9 1427 aa23.25■■□□□ 1.31
TTC38-203ENST00000421359 AHDC1Q5TGY3 1603 aaPredicted RBP23.24■■□□□ 1.31
TTC38-203ENST00000421359 BRINP3Q76B58 766 aa23.23■■□□□ 1.31
TTC38-203ENST00000421359 ADGRL3Q9HAR2 1447 aa23.22■■□□□ 1.31
TTC38-203ENST00000421359 COL16A1Q07092 1604 aaPredicted RBP23.22■■□□□ 1.31
TTC38-203ENST00000421359 RGS17Q9UGC6 210 aaPredicted RBP23.21■■□□□ 1.31
TTC38-203ENST00000421359 ZNF772Q68DY9 489 aaPredicted RBP23.2■■□□□ 1.3
TTC38-203ENST00000421359 LRRC59Q96AG4 307 aaKnown RBP23.2■■□□□ 1.3
TTC38-203ENST00000421359 PTCH1Q13635 1447 aa23.19■■□□□ 1.3
TTC38-203ENST00000421359 MPHOSPH9Q99550 1183 aa23.18■■□□□ 1.3
TTC38-203ENST00000421359 ASXL1Q8IXJ9 1541 aa23.17■■□□□ 1.3
TTC38-203ENST00000421359 MST1RQ04912 1400 aa23.16■■□□□ 1.3
TTC38-203ENST00000421359 ANKRD30BQ9BXX2 1392 aa23.16■■□□□ 1.3
TTC38-203ENST00000421359 SHPRHQ149N8 1683 aa23.16■■□□□ 1.3
TTC38-203ENST00000421359 POTEAQ6S8J7 498 aa23.14■■□□□ 1.29
TTC38-203ENST00000421359 PPLO60437 1756 aa23.14■■□□□ 1.29
TTC38-203ENST00000421359 RGL3Q3MIN7 710 aa23.13■■□□□ 1.29
TTC38-203ENST00000421359 PRAG1Q86YV5 1406 aa23.12■■□□□ 1.29
TTC38-203ENST00000421359 SETD5Q9C0A6 1442 aa23.12■■□□□ 1.29
TTC38-203ENST00000421359 FOXD1Q16676 465 aa23.11■■□□□ 1.29
TTC38-203ENST00000421359 NUTM2BA6NNL0 878 aaPredicted RBP23.1■■□□□ 1.29
TTC38-203ENST00000421359 NUTM2EB1AL46 878 aaPredicted RBP23.1■■□□□ 1.29
TTC38-203ENST00000421359 NUTM2AQ8IVF1 878 aaPredicted RBP23.1■■□□□ 1.29
TTC38-203ENST00000421359 NALCNQ8IZF0 1738 aa23.09■■□□□ 1.29
TTC38-203ENST00000421359 NHSL1Q5SYE7 1610 aa23.08■■□□□ 1.29
TTC38-203ENST00000421359 ROBO2Q9HCK4 1378 aa23.08■■□□□ 1.29
TTC38-203ENST00000421359 C1orf167Q5SNV9 1468 aa23.07■■□□□ 1.28
TTC38-203ENST00000421359 SETD1AO15047 1707 aaKnown RBP23.06■■□□□ 1.28
TTC38-203ENST00000421359 SPATA31E1Q6ZUB1 1445 aa23.04■■□□□ 1.28
TTC38-203ENST00000421359 ADGRF5Q8IZF2 1346 aa23.04■■□□□ 1.28
TTC38-203ENST00000421359 LRP6O75581 1613 aa23.04■■□□□ 1.28
TTC38-203ENST00000421359 RXRBP28702 533 aa23.03■■□□□ 1.28
TTC38-203ENST00000421359 LRPPRCP42704 1394 aaKnown RBP23.02■■□□□ 1.28
TTC38-203ENST00000421359 STK26Q9P289 416 aa23.02■■□□□ 1.28
TTC38-203ENST00000421359 NPHP3Q7Z494 1330 aa23.01■■□□□ 1.27
TTC38-203ENST00000421359 ABCC11Q96J66 1382 aa23■■□□□ 1.27
TTC38-203ENST00000421359 ESCO1Q5FWF5 840 aa22.99■■□□□ 1.27
TTC38-203ENST00000421359 AFF2P51816 1311 aa22.98■■□□□ 1.27
TTC38-203ENST00000421359 PNPLA6Q8IY17 1366 aa22.98■■□□□ 1.27
TTC38-203ENST00000421359 TECPR2O15040 1411 aa22.98■■□□□ 1.27
TTC38-203ENST00000421359 CDC42BPGQ6DT37 1551 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms