RNA–Protein interactions for RNA: ENST00000420148.5

PBRM1-210, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-210ENST00000420148 MYO5BQ9ULV0 1848 aa39.74■■■■□ 3.95
PBRM1-210ENST00000420148 NUP155O75694 1391 aa39.72■■■■□ 3.95
PBRM1-210ENST00000420148 SOCS7O14512 581 aa39.71■■■■□ 3.95
PBRM1-210ENST00000420148 RIMS2Q9UQ26 1411 aa39.71■■■■□ 3.95
PBRM1-210ENST00000420148 PLEKHG1Q9ULL1 1385 aa39.71■■■■□ 3.95
PBRM1-210ENST00000420148 NWD1Q149M9 1564 aa39.69■■■■□ 3.94
PBRM1-210ENST00000420148 HDGFP51858 240 aaKnown RBP39.69■■■■□ 3.94
PBRM1-210ENST00000420148 TMEM94Q12767 1356 aa39.69■■■■□ 3.94
PBRM1-210ENST00000420148 MED1Q15648 1581 aaPredicted RBP39.67■■■■□ 3.94
PBRM1-210ENST00000420148 NKTRP30414 1462 aaKnown RBP39.66■■■■□ 3.94
PBRM1-210ENST00000420148 RRBP1Q9P2E9 1410 aaKnown RBP39.65■■■■□ 3.94
PBRM1-210ENST00000420148 PROSER2Q86WR7 435 aaPredicted RBP39.61■■■■□ 3.93
PBRM1-210ENST00000420148 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.61■■■■□ 3.93
PBRM1-210ENST00000420148 BCANQ96GW7 911 aa39.61■■■■□ 3.93
PBRM1-210ENST00000420148 PPP1R15AO75807 674 aaPredicted RBP39.6■■■■□ 3.93
PBRM1-210ENST00000420148 CHGAP10645 457 aaKnown RBP39.58■■■■□ 3.93
PBRM1-210ENST00000420148 FAM135BQ49AJ0 1406 aa39.57■■■■□ 3.93
PBRM1-210ENST00000420148 TBX22Q9Y458 520 aa39.56■■■■□ 3.92
PBRM1-210ENST00000420148 CHD2O14647 1828 aaKnown RBP39.54■■■■□ 3.92
PBRM1-210ENST00000420148 ADAMTS13Q76LX8 1427 aa39.5■■■■□ 3.91
PBRM1-210ENST00000420148 RBM33Q96EV2 1170 aaKnown RBP39.5■■■■□ 3.91
PBRM1-210ENST00000420148 SENP3Q9H4L4 574 aaPredicted RBP39.5■■■■□ 3.91
PBRM1-210ENST00000420148 NAIPQ13075 1403 aa39.47■■■■□ 3.91
PBRM1-210ENST00000420148 DIP2AQ14689 1571 aa39.46■■■■□ 3.91
PBRM1-210ENST00000420148 SPHKAPQ2M3C7 1700 aa39.45■■■■□ 3.91
PBRM1-210ENST00000420148 NUTM2DQ5VT03 806 aaPredicted RBP39.45■■■■□ 3.91
PBRM1-210ENST00000420148 MSH6P52701 1360 aa39.44■■■■□ 3.9
PBRM1-210ENST00000420148 PIK3R4Q99570 1358 aa39.44■■■■□ 3.9
PBRM1-210ENST00000420148 NCOA3Q9Y6Q9 1424 aa39.41■■■■□ 3.9
PBRM1-210ENST00000420148 ROBO1Q9Y6N7 1651 aa39.38■■■■□ 3.9
PBRM1-210ENST00000420148 PHF23Q9BUL5 403 aaPredicted RBP39.34■■■■□ 3.89
PBRM1-210ENST00000420148 HFM1A2PYH4 1435 aa39.33■■■■□ 3.89
PBRM1-210ENST00000420148 SLAIN2Q9P270 581 aa39.33■■■■□ 3.89
PBRM1-210ENST00000420148 TRPM2O94759 1503 aa39.33■■■■□ 3.89
PBRM1-210ENST00000420148 SETBP1Q9Y6X0 1596 aa39.29■■■■□ 3.88
PBRM1-210ENST00000420148 CLTCL1P53675 1640 aa39.28■■■■□ 3.88
PBRM1-210ENST00000420148 NRXN3Q9Y4C0 1643 aa39.28■■■■□ 3.88
PBRM1-210ENST00000420148 PTPRUQ92729 1446 aa39.27■■■■□ 3.88
PBRM1-210ENST00000420148 ZNF326Q5BKZ1 582 aaKnown RBP39.24■■■■□ 3.87
PBRM1-210ENST00000420148 AMOTL2Q9Y2J4 779 aa39.24■■■■□ 3.87
PBRM1-210ENST00000420148 C19orf44Q9H6X5 657 aa39.21■■■■□ 3.87
PBRM1-210ENST00000420148 NEXMIFQ5QGS0 1516 aa39.19■■■■□ 3.86
PBRM1-210ENST00000420148 SIPA1L2Q9P2F8 1722 aaPredicted RBP39.18■■■■□ 3.86
PBRM1-210ENST00000420148 C14orf37Q86TY3 774 aa39.18■■■■□ 3.86
PBRM1-210ENST00000420148 XRN1Q8IZH2 1706 aaKnown RBP39.17■■■■□ 3.86
PBRM1-210ENST00000420148 CADPS2Q86UW7 1296 aa39.17■■■■□ 3.86
PBRM1-210ENST00000420148 TRIM52Q96A61 297 aa39.16■■■■□ 3.86
PBRM1-210ENST00000420148 RGS17Q9UGC6 210 aaPredicted RBP39.16■■■■□ 3.86
PBRM1-210ENST00000420148 KIF1BO60333 1816 aa39.15■■■■□ 3.86
PBRM1-210ENST00000420148 METP08581 1390 aa39.13■■■■□ 3.85
PBRM1-210ENST00000420148 PHLPP1O60346 1717 aa39.13■■■■□ 3.85
PBRM1-210ENST00000420148 ATF3P18847 181 aa39.11■■■■□ 3.85
PBRM1-210ENST00000420148 SLC4A1APQ9BWU0 796 aaKnown RBP39.1■■■■□ 3.85
PBRM1-210ENST00000420148 DCCP43146 1447 aa39.09■■■■□ 3.85
PBRM1-210ENST00000420148 JCADQ9P266 1359 aa39.08■■■■□ 3.85
PBRM1-210ENST00000420148 COL16A1Q07092 1604 aaPredicted RBP39.07■■■■□ 3.84
PBRM1-210ENST00000420148 AHDC1Q5TGY3 1603 aaPredicted RBP39.03■■■■□ 3.84
PBRM1-210ENST00000420148 RPGRIP1LQ68CZ1 1315 aa39.01■■■■□ 3.84
PBRM1-210ENST00000420148 VGFO15240 615 aaPredicted RBP39■■■■□ 3.83
PBRM1-210ENST00000420148 BRINP3Q76B58 766 aa38.96■■■■□ 3.83
PBRM1-210ENST00000420148 ADGRL3Q9HAR2 1447 aa38.94■■■■□ 3.82
PBRM1-210ENST00000420148 SETD1AO15047 1707 aaKnown RBP38.94■■■■□ 3.82
PBRM1-210ENST00000420148 MST1RQ04912 1400 aa38.93■■■■□ 3.82
PBRM1-210ENST00000420148 POTEAQ6S8J7 498 aa38.9■■■■□ 3.82
PBRM1-210ENST00000420148 PPLO60437 1756 aa38.9■■■■□ 3.82
PBRM1-210ENST00000420148 FOXD1Q16676 465 aa38.89■■■■□ 3.82
PBRM1-210ENST00000420148 PTCH1Q13635 1447 aa38.89■■■■□ 3.82
PBRM1-210ENST00000420148 PRAG1Q86YV5 1406 aa38.89■■■■□ 3.82
PBRM1-210ENST00000420148 SPATA31A6Q5VVP1 1343 aa38.89■■■■□ 3.82
PBRM1-210ENST00000420148 ASXL1Q8IXJ9 1541 aa38.88■■■■□ 3.81
PBRM1-210ENST00000420148 NALCNQ8IZF0 1738 aa38.85■■■■□ 3.81
PBRM1-210ENST00000420148 SHPRHQ149N8 1683 aa38.84■■■■□ 3.81
PBRM1-210ENST00000420148 MPHOSPH9Q99550 1183 aa38.84■■■■□ 3.81
PBRM1-210ENST00000420148 LRP6O75581 1613 aa38.82■■■■□ 3.81
PBRM1-210ENST00000420148 CCDC144AA2RUR9 1427 aa38.82■■■■□ 3.81
PBRM1-210ENST00000420148 ROBO2Q9HCK4 1378 aa38.81■■■■□ 3.8
PBRM1-210ENST00000420148 SPATA31E1Q6ZUB1 1445 aa38.8■■■■□ 3.8
PBRM1-210ENST00000420148 NHSL1Q5SYE7 1610 aa38.79■■■■□ 3.8
PBRM1-210ENST00000420148 SETD5Q9C0A6 1442 aa38.78■■■■□ 3.8
PBRM1-210ENST00000420148 ACIN1Q9UKV3 1341 aaKnown RBP38.77■■■■□ 3.8
PBRM1-210ENST00000420148 C1orf167Q5SNV9 1468 aa38.73■■■■□ 3.79
PBRM1-210ENST00000420148 ADGRF5Q8IZF2 1346 aa38.71■■■■□ 3.79
PBRM1-210ENST00000420148 ANKRD30BQ9BXX2 1392 aa38.7■■■■□ 3.79
PBRM1-210ENST00000420148 LRRC59Q96AG4 307 aaKnown RBP38.68■■■■□ 3.78
PBRM1-210ENST00000420148 IFT172Q9UG01 1749 aa38.68■■■■□ 3.78
PBRM1-210ENST00000420148 RGL3Q3MIN7 710 aa38.67■■■■□ 3.78
PBRM1-210ENST00000420148 MEX3CQ5U5Q3 659 aaKnown RBP38.66■■■■□ 3.78
PBRM1-210ENST00000420148 LAMC1P11047 1609 aa38.64■■■■□ 3.78
PBRM1-210ENST00000420148 DDX17Q92841 729 aaKnown RBP38.63■■■■□ 3.77
PBRM1-210ENST00000420148 ZNF772Q68DY9 489 aaPredicted RBP38.62■■■■□ 3.77
PBRM1-210ENST00000420148 TECPR2O15040 1411 aa38.61■■■■□ 3.77
PBRM1-210ENST00000420148 PIK3C2GO75747 1445 aa38.59■■■■□ 3.77
PBRM1-210ENST00000420148 PNPLA6Q8IY17 1366 aa38.58■■■■□ 3.77
PBRM1-210ENST00000420148 NUTM2BA6NNL0 878 aaPredicted RBP38.57■■■■□ 3.76
PBRM1-210ENST00000420148 NUTM2EB1AL46 878 aaPredicted RBP38.57■■■■□ 3.76
PBRM1-210ENST00000420148 NUTM2AQ8IVF1 878 aaPredicted RBP38.57■■■■□ 3.76
PBRM1-210ENST00000420148 LRPPRCP42704 1394 aaKnown RBP38.57■■■■□ 3.76
PBRM1-210ENST00000420148 ORAI2Q96SN7 254 aa38.56■■■■□ 3.76
PBRM1-210ENST00000420148 CDC42BPGQ6DT37 1551 aa38.56■■■■□ 3.76
PBRM1-210ENST00000420148 ABCC11Q96J66 1382 aa38.55■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms