RNA–Protein interactions for RNA: ENST00000418408.2

ITM2C-205, Transcript of integral membrane protein 2C, humanhuman

TSL 4

Gene ITM2C, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-205ENST00000418408 ANKRD50Q9ULJ7 1429 aa24.61■■□□□ 1.53
ITM2C-205ENST00000418408 GCC2Q8IWJ2 1684 aa24.6■■□□□ 1.53
ITM2C-205ENST00000418408 TMEM131LA2VDJ0 1609 aa24.6■■□□□ 1.53
ITM2C-205ENST00000418408 UNC13BO14795 1591 aa24.59■■□□□ 1.53
ITM2C-205ENST00000418408 SLC26A8Q96RN1 970 aa24.58■■□□□ 1.53
ITM2C-205ENST00000418408 SENP3Q9H4L4 574 aaPredicted RBP24.57■■□□□ 1.52
ITM2C-205ENST00000418408 PLEKHG1Q9ULL1 1385 aa24.55■■□□□ 1.52
ITM2C-205ENST00000418408 PROSER2Q86WR7 435 aaPredicted RBP24.53■■□□□ 1.52
ITM2C-205ENST00000418408 E9PCH4 1651 aa24.52■■□□□ 1.52
ITM2C-205ENST00000418408 RIMS2Q9UQ26 1411 aa24.5■■□□□ 1.51
ITM2C-205ENST00000418408 IQGAP3Q86VI3 1631 aa24.48■■□□□ 1.51
ITM2C-205ENST00000418408 RBM33Q96EV2 1170 aaKnown RBP24.48■■□□□ 1.51
ITM2C-205ENST00000418408 NCOA3Q9Y6Q9 1424 aa24.48■■□□□ 1.51
ITM2C-205ENST00000418408 PHLPP1O60346 1717 aa24.47■■□□□ 1.51
ITM2C-205ENST00000418408 ADAMTS13Q76LX8 1427 aa24.46■■□□□ 1.51
ITM2C-205ENST00000418408 MSH6P52701 1360 aa24.46■■□□□ 1.51
ITM2C-205ENST00000418408 ROCK1Q13464 1354 aa24.45■■□□□ 1.5
ITM2C-205ENST00000418408 FAM50AQ14320 339 aaKnown RBP24.45■■□□□ 1.5
ITM2C-205ENST00000418408 TBX22Q9Y458 520 aa24.45■■□□□ 1.5
ITM2C-205ENST00000418408 DIP2AQ14689 1571 aa24.45■■□□□ 1.5
ITM2C-205ENST00000418408 COL16A1Q07092 1604 aaPredicted RBP24.44■■□□□ 1.5
ITM2C-205ENST00000418408 POTEAQ6S8J7 498 aa24.44■■□□□ 1.5
ITM2C-205ENST00000418408 SLAIN2Q9P270 581 aa24.44■■□□□ 1.5
ITM2C-205ENST00000418408 HDGFP51858 240 aaKnown RBP24.41■■□□□ 1.5
ITM2C-205ENST00000418408 PIK3R4Q99570 1358 aa24.41■■□□□ 1.5
ITM2C-205ENST00000418408 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.4■■□□□ 1.5
ITM2C-205ENST00000418408 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.38■■□□□ 1.49
ITM2C-205ENST00000418408 JCADQ9P266 1359 aa24.38■■□□□ 1.49
ITM2C-205ENST00000418408 AHDC1Q5TGY3 1603 aaPredicted RBP24.36■■□□□ 1.49
ITM2C-205ENST00000418408 PPP1R15AO75807 674 aaPredicted RBP24.35■■□□□ 1.49
ITM2C-205ENST00000418408 BCANQ96GW7 911 aa24.35■■□□□ 1.49
ITM2C-205ENST00000418408 NRXN3Q9Y4C0 1643 aa24.35■■□□□ 1.49
ITM2C-205ENST00000418408 TRPM2O94759 1503 aa24.32■■□□□ 1.48
ITM2C-205ENST00000418408 SHPRHQ149N8 1683 aa24.32■■□□□ 1.48
ITM2C-205ENST00000418408 PTPRUQ92729 1446 aa24.32■■□□□ 1.48
ITM2C-205ENST00000418408 XRN1Q8IZH2 1706 aaKnown RBP24.32■■□□□ 1.48
ITM2C-205ENST00000418408 LRP6O75581 1613 aa24.31■■□□□ 1.48
ITM2C-205ENST00000418408 SETBP1Q9Y6X0 1596 aa24.3■■□□□ 1.48
ITM2C-205ENST00000418408 SPHKAPQ2M3C7 1700 aa24.3■■□□□ 1.48
ITM2C-205ENST00000418408 C19orf44Q9H6X5 657 aa24.29■■□□□ 1.48
ITM2C-205ENST00000418408 SETD1AO15047 1707 aaKnown RBP24.29■■□□□ 1.48
ITM2C-205ENST00000418408 NUP155O75694 1391 aa24.28■■□□□ 1.48
ITM2C-205ENST00000418408 DCCP43146 1447 aa24.27■■□□□ 1.48
ITM2C-205ENST00000418408 CADPS2Q86UW7 1296 aa24.27■■□□□ 1.48
ITM2C-205ENST00000418408 NUTM2DQ5VT03 806 aaPredicted RBP24.26■■□□□ 1.47
ITM2C-205ENST00000418408 SPATA31A6Q5VVP1 1343 aa24.26■■□□□ 1.47
ITM2C-205ENST00000418408 CHGAP10645 457 aaKnown RBP24.25■■□□□ 1.47
ITM2C-205ENST00000418408 AMOTL2Q9Y2J4 779 aa24.22■■□□□ 1.47
ITM2C-205ENST00000418408 NHSL1Q5SYE7 1610 aa24.21■■□□□ 1.47
ITM2C-205ENST00000418408 ATF3P18847 181 aa24.19■■□□□ 1.46
ITM2C-205ENST00000418408 BRINP3Q76B58 766 aa24.19■■□□□ 1.46
ITM2C-205ENST00000418408 ASXL1Q8IXJ9 1541 aa24.18■■□□□ 1.46
ITM2C-205ENST00000418408 MST1RQ04912 1400 aa24.18■■□□□ 1.46
ITM2C-205ENST00000418408 NEXMIFQ5QGS0 1516 aa24.17■■□□□ 1.46
ITM2C-205ENST00000418408 C14orf37Q86TY3 774 aa24.17■■□□□ 1.46
ITM2C-205ENST00000418408 CLTCL1P53675 1640 aa24.17■■□□□ 1.46
ITM2C-205ENST00000418408 SETD5Q9C0A6 1442 aa24.16■■□□□ 1.46
ITM2C-205ENST00000418408 METP08581 1390 aa24.16■■□□□ 1.46
ITM2C-205ENST00000418408 NALCNQ8IZF0 1738 aa24.13■■□□□ 1.45
ITM2C-205ENST00000418408 ZNF772Q68DY9 489 aaPredicted RBP24.12■■□□□ 1.45
ITM2C-205ENST00000418408 KIF1BO60333 1816 aa24.12■■□□□ 1.45
ITM2C-205ENST00000418408 ADGRL3Q9HAR2 1447 aa24.11■■□□□ 1.45
ITM2C-205ENST00000418408 LAMC1P11047 1609 aa24.11■■□□□ 1.45
ITM2C-205ENST00000418408 CDK12Q9NYV4 1490 aaPredicted RBP24.09■■□□□ 1.45
ITM2C-205ENST00000418408 PRAG1Q86YV5 1406 aa24.08■■□□□ 1.44
ITM2C-205ENST00000418408 RRBP1Q9P2E9 1410 aaKnown RBP24.07■■□□□ 1.44
ITM2C-205ENST00000418408 ITGAEP38570 1179 aa24.06■■□□□ 1.44
ITM2C-205ENST00000418408 NAIPQ13075 1403 aa24.06■■□□□ 1.44
ITM2C-205ENST00000418408 MEX3CQ5U5Q3 659 aaKnown RBP24.04■■□□□ 1.44
ITM2C-205ENST00000418408 UPF1Q92900 1129 aaKnown RBP eCLIP24.04■■□□□ 1.44
ITM2C-205ENST00000418408 PTCH1Q13635 1447 aa24.03■■□□□ 1.44
ITM2C-205ENST00000418408 ZNF326Q5BKZ1 582 aaKnown RBP24.02■■□□□ 1.44
ITM2C-205ENST00000418408 PNPLA6Q8IY17 1366 aa24.01■■□□□ 1.43
ITM2C-205ENST00000418408 LRRC59Q96AG4 307 aaKnown RBP24■■□□□ 1.43
ITM2C-205ENST00000418408 C1orf167Q5SNV9 1468 aa24■■□□□ 1.43
ITM2C-205ENST00000418408 PPLO60437 1756 aa23.98■■□□□ 1.43
ITM2C-205ENST00000418408 RXRBP28702 533 aa23.98■■□□□ 1.43
ITM2C-205ENST00000418408 AFF2P51816 1311 aa23.97■■□□□ 1.43
ITM2C-205ENST00000418408 TRIM52Q96A61 297 aa23.96■■□□□ 1.43
ITM2C-205ENST00000418408 ROBO2Q9HCK4 1378 aa23.95■■□□□ 1.42
ITM2C-205ENST00000418408 NUTM2BA6NNL0 878 aaPredicted RBP23.95■■□□□ 1.42
ITM2C-205ENST00000418408 NUTM2EB1AL46 878 aaPredicted RBP23.95■■□□□ 1.42
ITM2C-205ENST00000418408 PPARGC1BQ86YN6 1023 aaKnown RBP23.95■■□□□ 1.42
ITM2C-205ENST00000418408 NUTM2AQ8IVF1 878 aaPredicted RBP23.95■■□□□ 1.42
ITM2C-205ENST00000418408 DDX17Q92841 729 aaKnown RBP23.95■■□□□ 1.42
ITM2C-205ENST00000418408 HFM1A2PYH4 1435 aa23.94■■□□□ 1.42
ITM2C-205ENST00000418408 SRCAPQ6ZRS2 3230 aa23.92■■□□□ 1.42
ITM2C-205ENST00000418408 SOS2Q07890 1332 aaPredicted RBP23.92■■□□□ 1.42
ITM2C-205ENST00000418408 RPGRIP1LQ68CZ1 1315 aa23.91■■□□□ 1.42
ITM2C-205ENST00000418408 VGFO15240 615 aaPredicted RBP23.91■■□□□ 1.42
ITM2C-205ENST00000418408 RGS12O14924 1447 aa23.91■■□□□ 1.42
ITM2C-205ENST00000418408 COL22A1Q8NFW1 1626 aaPredicted RBP23.91■■□□□ 1.42
ITM2C-205ENST00000418408 EP400Q96L91 3159 aa23.88■■□□□ 1.41
ITM2C-205ENST00000418408 CDC42BPGQ6DT37 1551 aa23.86■■□□□ 1.41
ITM2C-205ENST00000418408 RBM6P78332 1123 aaKnown RBP23.86■■□□□ 1.41
ITM2C-205ENST00000418408 C8orf37Q96NL8 207 aa23.85■■□□□ 1.41
ITM2C-205ENST00000418408 ORAI2Q96SN7 254 aa23.85■■□□□ 1.41
ITM2C-205ENST00000418408 QTRT2Q9H974 415 aaKnown RBP23.85■■□□□ 1.41
ITM2C-205ENST00000418408 IFT172Q9UG01 1749 aa23.84■■□□□ 1.41
ITM2C-205ENST00000418408 TECPR2O15040 1411 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms