RNA–Protein interactions for RNA: ENST00000417463.1

AP000550.2-201, humanhuman

TSL 5 BASIC

Gene AP000550.2, Length 774 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.2-201ENST00000417463 SULF1Q8IWU6 871 aa8.69□□□□□ -1.02
AP000550.2-201ENST00000417463 NLRP7Q8WX94 980 aa8.69□□□□□ -1.02
AP000550.2-201ENST00000417463 SEPT9Q9UHD8 586 aaPredicted RBP8.69□□□□□ -1.02
AP000550.2-201ENST00000417463 ANKRD13DQ6ZTN6 518 aa8.68□□□□□ -1.02
AP000550.2-201ENST00000417463 MRPL50Q8N5N7 158 aaKnown RBP8.68□□□□□ -1.02
AP000550.2-201ENST00000417463 HDGFP51858 240 aaKnown RBP8.67□□□□□ -1.02
AP000550.2-201ENST00000417463 FAM117AQ9C073 453 aa8.67□□□□□ -1.02
AP000550.2-201ENST00000417463 CDAN1Q8IWY9 1227 aa8.66□□□□□ -1.02
AP000550.2-201ENST00000417463 IL27Q8NEV9 243 aa8.65□□□□□ -1.02
AP000550.2-201ENST00000417463 ZFRQ96KR1 1074 aaKnown RBP8.65□□□□□ -1.02
AP000550.2-201ENST00000417463 PLEKHG3A1L390 1219 aa8.64□□□□□ -1.03
AP000550.2-201ENST00000417463 CD46P15529 392 aa8.64□□□□□ -1.03
AP000550.2-201ENST00000417463 SLC4A3P48751 1232 aa8.64□□□□□ -1.03
AP000550.2-201ENST00000417463 SWT1Q5T5J6 900 aaKnown RBP8.64□□□□□ -1.03
AP000550.2-201ENST00000417463 RSPH4AQ5TD94 716 aa8.64□□□□□ -1.03
AP000550.2-201ENST00000417463 STAC3Q96MF2 364 aa8.64□□□□□ -1.03
AP000550.2-201ENST00000417463 SLF2Q8IX21 1173 aa8.63□□□□□ -1.03
AP000550.2-201ENST00000417463 GOPCQ9HD26 462 aa8.63□□□□□ -1.03
AP000550.2-201ENST00000417463 SAMD7Q7Z3H4 446 aa8.62□□□□□ -1.03
AP000550.2-201ENST00000417463 BEGAINQ9BUH8 593 aa8.62□□□□□ -1.03
AP000550.2-201ENST00000417463 PCDH10Q9P2E7 1040 aa8.62□□□□□ -1.03
AP000550.2-201ENST00000417463 DDX11L8A8MPP1 907 aa8.61□□□□□ -1.03
AP000550.2-201ENST00000417463 DIXDC1Q155Q3 683 aa8.61□□□□□ -1.03
AP000550.2-201ENST00000417463 NECTIN2Q92692 538 aa8.61□□□□□ -1.03
AP000550.2-201ENST00000417463 ANKK1Q8NFD2 765 aa8.6□□□□□ -1.03
AP000550.2-201ENST00000417463 LRCH3Q96II8 777 aa8.6□□□□□ -1.03
AP000550.2-201ENST00000417463 RSPH6AQ9H0K4 717 aa8.6□□□□□ -1.03
AP000550.2-201ENST00000417463 GOLGA8CPA6NN73 597 aa8.59□□□□□ -1.03
AP000550.2-201ENST00000417463 SOWAHBA6NEL2 793 aa8.58□□□□□ -1.04
AP000550.2-201ENST00000417463 SLC10A3P09131 477 aa8.58□□□□□ -1.04
AP000550.2-201ENST00000417463 GCGRP47871 477 aa8.58□□□□□ -1.04
AP000550.2-201ENST00000417463 SH3D19Q5HYK7 790 aa8.58□□□□□ -1.04
AP000550.2-201ENST00000417463 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.58□□□□□ -1.04
AP000550.2-201ENST00000417463 RDH13Q8NBN7 331 aa8.57□□□□□ -1.04
AP000550.2-201ENST00000417463 USP46P62068 366 aa8.56□□□□□ -1.04
AP000550.2-201ENST00000417463 WNT2BQ93097 391 aa8.56□□□□□ -1.04
AP000550.2-201ENST00000417463 TBC1D2Q9BYX2 928 aa8.56□□□□□ -1.04
AP000550.2-201ENST00000417463 GJA5P36382 358 aa8.55□□□□□ -1.04
AP000550.2-201ENST00000417463 SKIV2LQ15477 1246 aaKnown RBP8.55□□□□□ -1.04
AP000550.2-201ENST00000417463 SPIRE2Q8WWL2 714 aa8.55□□□□□ -1.04
AP000550.2-201ENST00000417463 KDM4AO75164 1064 aa8.54□□□□□ -1.04
AP000550.2-201ENST00000417463 NUTM1Q86Y26 1132 aa8.54□□□□□ -1.04
AP000550.2-201ENST00000417463 TSR3Q9UJK0 312 aaKnown RBP8.54□□□□□ -1.04
AP000550.2-201ENST00000417463 MYSM1Q5VVJ2 828 aa8.53□□□□□ -1.04
AP000550.2-201ENST00000417463 PRR14Q9BWN1 585 aa8.53□□□□□ -1.04
AP000550.2-201ENST00000417463 PPP4CP60510 307 aa8.52□□□□□ -1.05
AP000550.2-201ENST00000417463 TUSC1Q2TAM9 212 aa8.52□□□□□ -1.05
AP000550.2-201ENST00000417463 RNF40O75150 1001 aa8.51□□□□□ -1.05
AP000550.2-201ENST00000417463 CFHP08603 1231 aa8.51□□□□□ -1.05
AP000550.2-201ENST00000417463 BCAMP50895 628 aa8.51□□□□□ -1.05
AP000550.2-201ENST00000417463 KMT5BQ4FZB7 885 aa8.51□□□□□ -1.05
AP000550.2-201ENST00000417463 THSD4Q6ZMP0 1018 aa8.51□□□□□ -1.05
AP000550.2-201ENST00000417463 SPTLC1O15269 473 aa8.5□□□□□ -1.05
AP000550.2-201ENST00000417463 ACTN4O43707 911 aaKnown RBP8.5□□□□□ -1.05
AP000550.2-201ENST00000417463 GRIPAP1Q4V328 841 aa8.5□□□□□ -1.05
AP000550.2-201ENST00000417463 NYAP1Q6ZVC0 841 aa8.5□□□□□ -1.05
AP000550.2-201ENST00000417463 PCMTD1Q96MG8 357 aaPredicted RBP8.5□□□□□ -1.05
AP000550.2-201ENST00000417463 HPS5Q9UPZ3 1129 aa8.5□□□□□ -1.05
AP000550.2-201ENST00000417463 HOXA2O43364 376 aa8.49□□□□□ -1.05
AP000550.2-201ENST00000417463 CLK2P49760 499 aaKnown RBP8.49□□□□□ -1.05
AP000550.2-201ENST00000417463 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.49□□□□□ -1.05
AP000550.2-201ENST00000417463 GTF3C3Q9Y5Q9 886 aa8.49□□□□□ -1.05
AP000550.2-201ENST00000417463 ATP6V1AP38606 617 aa8.48□□□□□ -1.05
AP000550.2-201ENST00000417463 RSBN1LQ6PCB5 846 aaPredicted RBP8.48□□□□□ -1.05
AP000550.2-201ENST00000417463 RIC3Q7Z5B4 369 aa8.48□□□□□ -1.05
AP000550.2-201ENST00000417463 KCTD12Q96CX2 325 aaKnown RBP8.48□□□□□ -1.05
AP000550.2-201ENST00000417463 MOXD2PA6NHM9 499 aa8.47□□□□□ -1.05
AP000550.2-201ENST00000417463 FUT2Q10981 343 aa8.47□□□□□ -1.05
AP000550.2-201ENST00000417463 MYT1LQ9UL68 1186 aa8.47□□□□□ -1.05
AP000550.2-201ENST00000417463 POLR3EQ9NVU0 708 aa8.46□□□□□ -1.06
AP000550.2-201ENST00000417463 WBP1LQ9NX94 342 aa8.46□□□□□ -1.06
AP000550.2-201ENST00000417463 NDUFV2P19404 249 aa8.45□□□□□ -1.06
AP000550.2-201ENST00000417463 APLP1P51693 650 aa8.45□□□□□ -1.06
AP000550.2-201ENST00000417463 PRPF38BQ5VTL8 546 aaKnown RBP8.45□□□□□ -1.06
AP000550.2-201ENST00000417463 SPNS2Q8IVW8 549 aa8.45□□□□□ -1.06
AP000550.2-201ENST00000417463 LIMD1Q9UGP4 676 aa8.45□□□□□ -1.06
AP000550.2-201ENST00000417463 MORN1Q5T089 497 aa8.44□□□□□ -1.06
AP000550.2-201ENST00000417463 PROCA1Q8NCQ7 364 aaPredicted RBP8.44□□□□□ -1.06
AP000550.2-201ENST00000417463 FDX1P10109 184 aa8.43□□□□□ -1.06
AP000550.2-201ENST00000417463 PPP2R2DQ66LE6 453 aa8.43□□□□□ -1.06
AP000550.2-201ENST00000417463 SALL2Q9Y467 1007 aaPredicted RBP8.42□□□□□ -1.06
AP000550.2-201ENST00000417463 LILRB3O75022 631 aa8.41□□□□□ -1.06
AP000550.2-201ENST00000417463 PCDHGC3Q9UN70 934 aa8.41□□□□□ -1.06
AP000550.2-201ENST00000417463 PCDHB3Q9Y5E6 796 aa8.41□□□□□ -1.06
AP000550.2-201ENST00000417463 PCDHB15Q9Y5E8 787 aa8.41□□□□□ -1.06
AP000550.2-201ENST00000417463 Q3C1V9 767 aa8.4□□□□□ -1.06
AP000550.2-201ENST00000417463 ZBTB3Q9H5J0 574 aa8.4□□□□□ -1.06
AP000550.2-201ENST00000417463 SPDYE5A6NIY4 337 aa8.39□□□□□ -1.07
AP000550.2-201ENST00000417463 PTPN5P54829 565 aa8.39□□□□□ -1.07
AP000550.2-201ENST00000417463 HLA-CQ95604 372 aa8.39□□□□□ -1.07
AP000550.2-201ENST00000417463 RNF166Q96A37 237 aaPredicted RBP8.39□□□□□ -1.07
AP000550.2-201ENST00000417463 SLC27A5Q9Y2P5 690 aa8.39□□□□□ -1.07
AP000550.2-201ENST00000417463 NR1I2O75469 434 aa8.38□□□□□ -1.07
AP000550.2-201ENST00000417463 HRCP23327 699 aa8.38□□□□□ -1.07
AP000550.2-201ENST00000417463 GUCA2AQ02747 115 aa8.38□□□□□ -1.07
AP000550.2-201ENST00000417463 MTMR2Q13614 643 aa8.38□□□□□ -1.07
AP000550.2-201ENST00000417463 QPCTQ16769 361 aa8.38□□□□□ -1.07
AP000550.2-201ENST00000417463 PUS10Q3MIT2 529 aaKnown RBP8.38□□□□□ -1.07
AP000550.2-201ENST00000417463 HCSTQ9UBK5 93 aa8.38□□□□□ -1.07
AP000550.2-201ENST00000417463 ATP1B4Q9UN42 357 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms