RNA–Protein interactions for RNA: ENST00000415294.2

LINC00343-202, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 1,320 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-202ENST00000415294 SULF1Q8IWU6 871 aa12.74□□□□□ -0.37
LINC00343-202ENST00000415294 DNAJB2P25686 324 aa12.73□□□□□ -0.37
LINC00343-202ENST00000415294 ARXQ96QS3 562 aa12.73□□□□□ -0.37
LINC00343-202ENST00000415294 FAM198AQ9UFP1 575 aa12.73□□□□□ -0.37
LINC00343-202ENST00000415294 TSKSQ9UJT2 592 aa12.73□□□□□ -0.37
LINC00343-202ENST00000415294 NLRP7Q8WX94 980 aa12.72□□□□□ -0.37
LINC00343-202ENST00000415294 ARHGAP33O14559 1287 aa12.71□□□□□ -0.37
LINC00343-202ENST00000415294 NUDT18Q6ZVK8 323 aa12.69□□□□□ -0.38
LINC00343-202ENST00000415294 TATDN2Q93075 761 aa12.69□□□□□ -0.38
LINC00343-202ENST00000415294 CCDC180Q9P1Z9 1646 aa12.69□□□□□ -0.38
LINC00343-202ENST00000415294 PNMA3Q9UL41 463 aa12.68□□□□□ -0.38
LINC00343-202ENST00000415294 MYSM1Q5VVJ2 828 aa12.67□□□□□ -0.38
LINC00343-202ENST00000415294 KCNK17Q96T54 332 aa12.67□□□□□ -0.38
LINC00343-202ENST00000415294 TMEM134Q9H6X4 195 aa12.67□□□□□ -0.38
LINC00343-202ENST00000415294 TBC1D2Q9BYX2 928 aa12.66□□□□□ -0.38
LINC00343-202ENST00000415294 CD46P15529 392 aa12.65□□□□□ -0.38
LINC00343-202ENST00000415294 CLK2P49760 499 aaKnown RBP12.65□□□□□ -0.38
LINC00343-202ENST00000415294 PSEN2P49810 448 aa12.64□□□□□ -0.39
LINC00343-202ENST00000415294 ADGRD1Q6QNK2 874 aa12.64□□□□□ -0.39
LINC00343-202ENST00000415294 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.64□□□□□ -0.39
LINC00343-202ENST00000415294 SLC4A5Q9BY07 1137 aa12.64□□□□□ -0.39
LINC00343-202ENST00000415294 TUSC1Q2TAM9 212 aa12.63□□□□□ -0.39
LINC00343-202ENST00000415294 ZBED2Q9BTP6 218 aa12.63□□□□□ -0.39
LINC00343-202ENST00000415294 RSPH4AQ5TD94 716 aa12.62□□□□□ -0.39
LINC00343-202ENST00000415294 POLR3EQ9NVU0 708 aa12.62□□□□□ -0.39
LINC00343-202ENST00000415294 SUPT5HO00267 1087 aaKnown RBP12.62□□□□□ -0.39
LINC00343-202ENST00000415294 GJA5P36382 358 aa12.62□□□□□ -0.39
LINC00343-202ENST00000415294 DMRTA1Q5VZB9 504 aa12.61□□□□□ -0.39
LINC00343-202ENST00000415294 NUTM1Q86Y26 1132 aa12.61□□□□□ -0.39
LINC00343-202ENST00000415294 ATP1B4Q9UN42 357 aaPredicted RBP12.61□□□□□ -0.39
LINC00343-202ENST00000415294 DDX11L8A8MPP1 907 aa12.6□□□□□ -0.39
LINC00343-202ENST00000415294 PROX2Q3B8N5 592 aa12.6□□□□□ -0.39
LINC00343-202ENST00000415294 PROCA1Q8NCQ7 364 aaPredicted RBP12.6□□□□□ -0.39
LINC00343-202ENST00000415294 RABGEF1Q9UJ41 708 aa12.6□□□□□ -0.39
LINC00343-202ENST00000415294 MCM6Q14566 821 aa12.59□□□□□ -0.39
LINC00343-202ENST00000415294 SPIRE2Q8WWL2 714 aa12.59□□□□□ -0.39
LINC00343-202ENST00000415294 KIAA1468Q9P260 1216 aa12.59□□□□□ -0.39
LINC00343-202ENST00000415294 A6NJR5 290 aa12.58□□□□□ -0.4
LINC00343-202ENST00000415294 C3orf80F5H4A9 247 aa12.58□□□□□ -0.4
LINC00343-202ENST00000415294 TK2O00142 265 aa12.58□□□□□ -0.4
LINC00343-202ENST00000415294 SPTLC1O15269 473 aa12.57□□□□□ -0.4
LINC00343-202ENST00000415294 RIC3Q7Z5B4 369 aa12.57□□□□□ -0.4
LINC00343-202ENST00000415294 BANK1Q8NDB2 785 aa12.57□□□□□ -0.4
LINC00343-202ENST00000415294 SLC4A3P48751 1232 aa12.56□□□□□ -0.4
LINC00343-202ENST00000415294 USP46P62068 366 aa12.56□□□□□ -0.4
LINC00343-202ENST00000415294 TMEM259Q4ZIN3 620 aa12.56□□□□□ -0.4
LINC00343-202ENST00000415294 PPP2R2DQ66LE6 453 aa12.56□□□□□ -0.4
LINC00343-202ENST00000415294 UBTFP17480 764 aaKnown RBP12.55□□□□□ -0.4
LINC00343-202ENST00000415294 HDGFP51858 240 aaKnown RBP12.54□□□□□ -0.4
LINC00343-202ENST00000415294 RSBN1LQ6PCB5 846 aaPredicted RBP12.54□□□□□ -0.4
LINC00343-202ENST00000415294 SPDYE5A6NIY4 337 aa12.53□□□□□ -0.4
LINC00343-202ENST00000415294 SMAPO00193 183 aa12.53□□□□□ -0.4
LINC00343-202ENST00000415294 HOMEZQ8IX15 550 aa12.53□□□□□ -0.4
LINC00343-202ENST00000415294 RDH13Q8NBN7 331 aa12.53□□□□□ -0.4
LINC00343-202ENST00000415294 STAC3Q96MF2 364 aa12.53□□□□□ -0.4
LINC00343-202ENST00000415294 LIMD1Q9UGP4 676 aa12.52□□□□□ -0.41
LINC00343-202ENST00000415294 RB1CC1Q8TDY2 1594 aa12.51□□□□□ -0.41
LINC00343-202ENST00000415294 KDM4AO75164 1064 aa12.51□□□□□ -0.41
LINC00343-202ENST00000415294 RFC5P40937 340 aa12.51□□□□□ -0.41
LINC00343-202ENST00000415294 FAM98CQ17RN3 349 aaKnown RBP12.51□□□□□ -0.41
LINC00343-202ENST00000415294 LAPTM4BQ86VI4 370 aa12.51□□□□□ -0.41
LINC00343-202ENST00000415294 SOCS7O14512 581 aa12.5□□□□□ -0.41
LINC00343-202ENST00000415294 HRO43593 1189 aa12.5□□□□□ -0.41
LINC00343-202ENST00000415294 GCGRP47871 477 aa12.5□□□□□ -0.41
LINC00343-202ENST00000415294 PRPF38BQ5VTL8 546 aaKnown RBP12.49□□□□□ -0.41
LINC00343-202ENST00000415294 NBPF3Q9H094 633 aa12.48□□□□□ -0.41
LINC00343-202ENST00000415294 MOXD2PA6NHM9 499 aa12.47□□□□□ -0.41
LINC00343-202ENST00000415294 RAD21O60216 631 aa12.47□□□□□ -0.41
LINC00343-202ENST00000415294 SLF2Q8IX21 1173 aa12.47□□□□□ -0.41
LINC00343-202ENST00000415294 VPS9D1Q9Y2B5 631 aa12.47□□□□□ -0.41
LINC00343-202ENST00000415294 APBB1O00213 710 aa12.46□□□□□ -0.41
LINC00343-202ENST00000415294 SWT1Q5T5J6 900 aaKnown RBP12.46□□□□□ -0.41
LINC00343-202ENST00000415294 HCSTQ9UBK5 93 aa12.46□□□□□ -0.41
LINC00343-202ENST00000415294 TRAK2O60296 914 aa12.44□□□□□ -0.42
LINC00343-202ENST00000415294 LILRB3O75022 631 aa12.44□□□□□ -0.42
LINC00343-202ENST00000415294 NECTIN2Q92692 538 aa12.44□□□□□ -0.42
LINC00343-202ENST00000415294 HOXA2O43364 376 aa12.43□□□□□ -0.42
LINC00343-202ENST00000415294 KCTD12Q96CX2 325 aaKnown RBP12.43□□□□□ -0.42
LINC00343-202ENST00000415294 SEPT9Q9UHD8 586 aaPredicted RBP12.43□□□□□ -0.42
LINC00343-202ENST00000415294 GRIPAP1Q4V328 841 aa12.42□□□□□ -0.42
LINC00343-202ENST00000415294 SLC10A3P09131 477 aa12.41□□□□□ -0.42
LINC00343-202ENST00000415294 PROSER2Q86WR7 435 aaPredicted RBP12.41□□□□□ -0.42
LINC00343-202ENST00000415294 CLUAP1Q96AJ1 413 aa12.41□□□□□ -0.42
LINC00343-202ENST00000415294 ZBTB3Q9H5J0 574 aa12.41□□□□□ -0.42
LINC00343-202ENST00000415294 NDUFV2P19404 249 aa12.4□□□□□ -0.42
LINC00343-202ENST00000415294 FDX1P10109 184 aa12.39□□□□□ -0.43
LINC00343-202ENST00000415294 PRM3Q9NNZ6 103 aa12.39□□□□□ -0.43
LINC00343-202ENST00000415294 BHMG1C9JSJ3 638 aaPredicted RBP12.38□□□□□ -0.43
LINC00343-202ENST00000415294 QPCTQ16769 361 aa12.38□□□□□ -0.43
LINC00343-202ENST00000415294 NUTM2BA6NNL0 878 aaPredicted RBP12.37□□□□□ -0.43
LINC00343-202ENST00000415294 NUTM2EB1AL46 878 aaPredicted RBP12.37□□□□□ -0.43
LINC00343-202ENST00000415294 CSPP1Q1MSJ5 1256 aa12.37□□□□□ -0.43
LINC00343-202ENST00000415294 NUTM2DQ5VT03 806 aaPredicted RBP12.37□□□□□ -0.43
LINC00343-202ENST00000415294 NUTM2AQ8IVF1 878 aaPredicted RBP12.37□□□□□ -0.43
LINC00343-202ENST00000415294 PCDHB15Q9Y5E8 787 aa12.37□□□□□ -0.43
LINC00343-202ENST00000415294 FBXO31Q5XUX0 539 aaPredicted RBP12.37□□□□□ -0.43
LINC00343-202ENST00000415294 SAMD7Q7Z3H4 446 aa12.37□□□□□ -0.43
LINC00343-202ENST00000415294 SNRKQ9NRH2 765 aa12.37□□□□□ -0.43
LINC00343-202ENST00000415294 FNBP4Q8N3X1 1017 aaPredicted RBP12.36□□□□□ -0.43
LINC00343-202ENST00000415294 COG6Q9Y2V7 657 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms