RNA–Protein interactions for RNA: ENST00000415294.2

LINC00343-202, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 1,320 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-202ENST00000415294 SULF1Q8IWU6 871 aa12.74□□□□□ -0.37
LINC00343-202ENST00000415294 DNAJB2P25686 324 aa12.73□□□□□ -0.37
LINC00343-202ENST00000415294 ARXQ96QS3 562 aa12.73□□□□□ -0.37
LINC00343-202ENST00000415294 FAM198AQ9UFP1 575 aa12.73□□□□□ -0.37
LINC00343-202ENST00000415294 TSKSQ9UJT2 592 aa12.73□□□□□ -0.37
LINC00343-202ENST00000415294 NLRP7Q8WX94 980 aa12.72□□□□□ -0.37
LINC00343-202ENST00000415294 ARHGAP33O14559 1287 aa12.71□□□□□ -0.37
LINC00343-202ENST00000415294 NUDT18Q6ZVK8 323 aa12.69□□□□□ -0.38
LINC00343-202ENST00000415294 TATDN2Q93075 761 aa12.69□□□□□ -0.38
LINC00343-202ENST00000415294 CCDC180Q9P1Z9 1646 aa12.69□□□□□ -0.38
LINC00343-202ENST00000415294 PNMA3Q9UL41 463 aa12.68□□□□□ -0.38
LINC00343-202ENST00000415294 MYSM1Q5VVJ2 828 aa12.67□□□□□ -0.38
LINC00343-202ENST00000415294 KCNK17Q96T54 332 aa12.67□□□□□ -0.38
LINC00343-202ENST00000415294 TMEM134Q9H6X4 195 aa12.67□□□□□ -0.38
LINC00343-202ENST00000415294 TBC1D2Q9BYX2 928 aa12.66□□□□□ -0.38
LINC00343-202ENST00000415294 CD46P15529 392 aa12.65□□□□□ -0.38
LINC00343-202ENST00000415294 CLK2P49760 499 aaKnown RBP12.65□□□□□ -0.38
LINC00343-202ENST00000415294 PSEN2P49810 448 aa12.64□□□□□ -0.39
LINC00343-202ENST00000415294 ADGRD1Q6QNK2 874 aa12.64□□□□□ -0.39
LINC00343-202ENST00000415294 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.64□□□□□ -0.39
LINC00343-202ENST00000415294 SLC4A5Q9BY07 1137 aa12.64□□□□□ -0.39
LINC00343-202ENST00000415294 TUSC1Q2TAM9 212 aa12.63□□□□□ -0.39
LINC00343-202ENST00000415294 ZBED2Q9BTP6 218 aa12.63□□□□□ -0.39
LINC00343-202ENST00000415294 RSPH4AQ5TD94 716 aa12.62□□□□□ -0.39
LINC00343-202ENST00000415294 POLR3EQ9NVU0 708 aa12.62□□□□□ -0.39
LINC00343-202ENST00000415294 SUPT5HO00267 1087 aaKnown RBP12.62□□□□□ -0.39
LINC00343-202ENST00000415294 GJA5P36382 358 aa12.62□□□□□ -0.39
LINC00343-202ENST00000415294 DMRTA1Q5VZB9 504 aa12.61□□□□□ -0.39
LINC00343-202ENST00000415294 NUTM1Q86Y26 1132 aa12.61□□□□□ -0.39
LINC00343-202ENST00000415294 ATP1B4Q9UN42 357 aaPredicted RBP12.61□□□□□ -0.39
LINC00343-202ENST00000415294 DDX11L8A8MPP1 907 aa12.6□□□□□ -0.39
LINC00343-202ENST00000415294 PROX2Q3B8N5 592 aa12.6□□□□□ -0.39
LINC00343-202ENST00000415294 PROCA1Q8NCQ7 364 aaPredicted RBP12.6□□□□□ -0.39
LINC00343-202ENST00000415294 RABGEF1Q9UJ41 708 aa12.6□□□□□ -0.39
LINC00343-202ENST00000415294 MCM6Q14566 821 aa12.59□□□□□ -0.39
LINC00343-202ENST00000415294 SPIRE2Q8WWL2 714 aa12.59□□□□□ -0.39
LINC00343-202ENST00000415294 KIAA1468Q9P260 1216 aa12.59□□□□□ -0.39
LINC00343-202ENST00000415294 A6NJR5 290 aa12.58□□□□□ -0.4
LINC00343-202ENST00000415294 C3orf80F5H4A9 247 aa12.58□□□□□ -0.4
LINC00343-202ENST00000415294 TK2O00142 265 aa12.58□□□□□ -0.4
LINC00343-202ENST00000415294 SPTLC1O15269 473 aa12.57□□□□□ -0.4
LINC00343-202ENST00000415294 RIC3Q7Z5B4 369 aa12.57□□□□□ -0.4
LINC00343-202ENST00000415294 BANK1Q8NDB2 785 aa12.57□□□□□ -0.4
LINC00343-202ENST00000415294 SLC4A3P48751 1232 aa12.56□□□□□ -0.4
LINC00343-202ENST00000415294 USP46P62068 366 aa12.56□□□□□ -0.4
LINC00343-202ENST00000415294 TMEM259Q4ZIN3 620 aa12.56□□□□□ -0.4
LINC00343-202ENST00000415294 PPP2R2DQ66LE6 453 aa12.56□□□□□ -0.4
LINC00343-202ENST00000415294 UBTFP17480 764 aaKnown RBP12.55□□□□□ -0.4
LINC00343-202ENST00000415294 HDGFP51858 240 aaKnown RBP12.54□□□□□ -0.4
LINC00343-202ENST00000415294 RSBN1LQ6PCB5 846 aaPredicted RBP12.54□□□□□ -0.4
LINC00343-202ENST00000415294 SPDYE5A6NIY4 337 aa12.53□□□□□ -0.4
LINC00343-202ENST00000415294 SMAPO00193 183 aa12.53□□□□□ -0.4
LINC00343-202ENST00000415294 HOMEZQ8IX15 550 aa12.53□□□□□ -0.4
LINC00343-202ENST00000415294 RDH13Q8NBN7 331 aa12.53□□□□□ -0.4
LINC00343-202ENST00000415294 STAC3Q96MF2 364 aa12.53□□□□□ -0.4
LINC00343-202ENST00000415294 LIMD1Q9UGP4 676 aa12.52□□□□□ -0.41
LINC00343-202ENST00000415294 RB1CC1Q8TDY2 1594 aa12.51□□□□□ -0.41
LINC00343-202ENST00000415294 KDM4AO75164 1064 aa12.51□□□□□ -0.41
LINC00343-202ENST00000415294 RFC5P40937 340 aa12.51□□□□□ -0.41
LINC00343-202ENST00000415294 FAM98CQ17RN3 349 aaKnown RBP12.51□□□□□ -0.41
LINC00343-202ENST00000415294 LAPTM4BQ86VI4 370 aa12.51□□□□□ -0.41
LINC00343-202ENST00000415294 SOCS7O14512 581 aa12.5□□□□□ -0.41
LINC00343-202ENST00000415294 HRO43593 1189 aa12.5□□□□□ -0.41
LINC00343-202ENST00000415294 GCGRP47871 477 aa12.5□□□□□ -0.41
LINC00343-202ENST00000415294 PRPF38BQ5VTL8 546 aaKnown RBP12.49□□□□□ -0.41
LINC00343-202ENST00000415294 NBPF3Q9H094 633 aa12.48□□□□□ -0.41
LINC00343-202ENST00000415294 MOXD2PA6NHM9 499 aa12.47□□□□□ -0.41
LINC00343-202ENST00000415294 RAD21O60216 631 aa12.47□□□□□ -0.41
LINC00343-202ENST00000415294 SLF2Q8IX21 1173 aa12.47□□□□□ -0.41
LINC00343-202ENST00000415294 VPS9D1Q9Y2B5 631 aa12.47□□□□□ -0.41
LINC00343-202ENST00000415294 APBB1O00213 710 aa12.46□□□□□ -0.41
LINC00343-202ENST00000415294 SWT1Q5T5J6 900 aaKnown RBP12.46□□□□□ -0.41
LINC00343-202ENST00000415294 HCSTQ9UBK5 93 aa12.46□□□□□ -0.41
LINC00343-202ENST00000415294 TRAK2O60296 914 aa12.44□□□□□ -0.42
LINC00343-202ENST00000415294 LILRB3O75022 631 aa12.44□□□□□ -0.42
LINC00343-202ENST00000415294 NECTIN2Q92692 538 aa12.44□□□□□ -0.42
LINC00343-202ENST00000415294 HOXA2O43364 376 aa12.43□□□□□ -0.42
LINC00343-202ENST00000415294 KCTD12Q96CX2 325 aaKnown RBP12.43□□□□□ -0.42
LINC00343-202ENST00000415294 SEPT9Q9UHD8 586 aaPredicted RBP12.43□□□□□ -0.42
LINC00343-202ENST00000415294 GRIPAP1Q4V328 841 aa12.42□□□□□ -0.42
LINC00343-202ENST00000415294 SLC10A3P09131 477 aa12.41□□□□□ -0.42
LINC00343-202ENST00000415294 PROSER2Q86WR7 435 aaPredicted RBP12.41□□□□□ -0.42
LINC00343-202ENST00000415294 CLUAP1Q96AJ1 413 aa12.41□□□□□ -0.42
LINC00343-202ENST00000415294 ZBTB3Q9H5J0 574 aa12.41□□□□□ -0.42
LINC00343-202ENST00000415294 NDUFV2P19404 249 aa12.4□□□□□ -0.42
LINC00343-202ENST00000415294 FDX1P10109 184 aa12.39□□□□□ -0.43
LINC00343-202ENST00000415294 PRM3Q9NNZ6 103 aa12.39□□□□□ -0.43
LINC00343-202ENST00000415294 BHMG1C9JSJ3 638 aaPredicted RBP12.38□□□□□ -0.43
LINC00343-202ENST00000415294 QPCTQ16769 361 aa12.38□□□□□ -0.43
LINC00343-202ENST00000415294 NUTM2BA6NNL0 878 aaPredicted RBP12.37□□□□□ -0.43
LINC00343-202ENST00000415294 NUTM2EB1AL46 878 aaPredicted RBP12.37□□□□□ -0.43
LINC00343-202ENST00000415294 CSPP1Q1MSJ5 1256 aa12.37□□□□□ -0.43
LINC00343-202ENST00000415294 NUTM2DQ5VT03 806 aaPredicted RBP12.37□□□□□ -0.43
LINC00343-202ENST00000415294 NUTM2AQ8IVF1 878 aaPredicted RBP12.37□□□□□ -0.43
LINC00343-202ENST00000415294 PCDHB15Q9Y5E8 787 aa12.37□□□□□ -0.43
LINC00343-202ENST00000415294 FBXO31Q5XUX0 539 aaPredicted RBP12.37□□□□□ -0.43
LINC00343-202ENST00000415294 SAMD7Q7Z3H4 446 aa12.37□□□□□ -0.43
LINC00343-202ENST00000415294 SNRKQ9NRH2 765 aa12.37□□□□□ -0.43
LINC00343-202ENST00000415294 FNBP4Q8N3X1 1017 aaPredicted RBP12.36□□□□□ -0.43
LINC00343-202ENST00000415294 COG6Q9Y2V7 657 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms