RNA–Protein interactions for RNA: ENST00000414479.1

SMC4P1-201, Transcript of structural maintenance of chromosomes 4 pseudogene 1, humanhuman

BASIC

Gene SMC4P1, Length 527 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4P1-201ENST00000414479 SNPHO15079 494 aa12.72□□□□□ -0.37
SMC4P1-201ENST00000414479 GJA5P36382 358 aa12.72□□□□□ -0.37
SMC4P1-201ENST00000414479 SPIRE2Q8WWL2 714 aa12.72□□□□□ -0.37
SMC4P1-201ENST00000414479 DDX11L8A8MPP1 907 aa12.71□□□□□ -0.37
SMC4P1-201ENST00000414479 NUDT18Q6ZVK8 323 aa12.71□□□□□ -0.37
SMC4P1-201ENST00000414479 SERPINA10Q9UK55 444 aa12.71□□□□□ -0.37
SMC4P1-201ENST00000414479 TRIM6-TRIM34B2RNG4 842 aa12.7□□□□□ -0.38
SMC4P1-201ENST00000414479 COL9A1P20849 921 aa12.7□□□□□ -0.38
SMC4P1-201ENST00000414479 PODXL2Q9NZ53 605 aa12.7□□□□□ -0.38
SMC4P1-201ENST00000414479 PNMA3Q9UL41 463 aa12.7□□□□□ -0.38
SMC4P1-201ENST00000414479 SPTLC1O15269 473 aa12.69□□□□□ -0.38
SMC4P1-201ENST00000414479 TMEM134Q9H6X4 195 aa12.69□□□□□ -0.38
SMC4P1-201ENST00000414479 LIMD1Q9UGP4 676 aa12.69□□□□□ -0.38
SMC4P1-201ENST00000414479 TSKSQ9UJT2 592 aa12.69□□□□□ -0.38
SMC4P1-201ENST00000414479 SOCS7O14512 581 aa12.68□□□□□ -0.38
SMC4P1-201ENST00000414479 TATDN2Q93075 761 aa12.68□□□□□ -0.38
SMC4P1-201ENST00000414479 COG6Q9Y2V7 657 aa12.68□□□□□ -0.38
SMC4P1-201ENST00000414479 PDIA4P13667 645 aaKnown RBP12.67□□□□□ -0.38
SMC4P1-201ENST00000414479 RSBN1LQ6PCB5 846 aaPredicted RBP12.67□□□□□ -0.38
SMC4P1-201ENST00000414479 FNBP4Q8N3X1 1017 aaPredicted RBP12.67□□□□□ -0.38
SMC4P1-201ENST00000414479 RDH13Q8NBN7 331 aa12.67□□□□□ -0.38
SMC4P1-201ENST00000414479 POM121Q96HA1 1249 aa12.67□□□□□ -0.38
SMC4P1-201ENST00000414479 FAM198AQ9UFP1 575 aa12.67□□□□□ -0.38
SMC4P1-201ENST00000414479 ZNF777Q9ULD5 760 aaPredicted RBP12.67□□□□□ -0.38
SMC4P1-201ENST00000414479 USP46P62068 366 aa12.65□□□□□ -0.38
SMC4P1-201ENST00000414479 SLC4A3P48751 1232 aa12.64□□□□□ -0.39
SMC4P1-201ENST00000414479 ZNF330Q9Y3S2 320 aaPredicted RBP12.64□□□□□ -0.39
SMC4P1-201ENST00000414479 SNRKQ9NRH2 765 aa12.63□□□□□ -0.39
SMC4P1-201ENST00000414479 NUTM2BA6NNL0 878 aaPredicted RBP12.62□□□□□ -0.39
SMC4P1-201ENST00000414479 NUTM2EB1AL46 878 aaPredicted RBP12.62□□□□□ -0.39
SMC4P1-201ENST00000414479 CSPP1Q1MSJ5 1256 aa12.62□□□□□ -0.39
SMC4P1-201ENST00000414479 NUTM2DQ5VT03 806 aaPredicted RBP12.62□□□□□ -0.39
SMC4P1-201ENST00000414479 NUTM2AQ8IVF1 878 aaPredicted RBP12.62□□□□□ -0.39
SMC4P1-201ENST00000414479 MOXD2PA6NHM9 499 aa12.61□□□□□ -0.39
SMC4P1-201ENST00000414479 PRPF38BQ5VTL8 546 aaKnown RBP12.61□□□□□ -0.39
SMC4P1-201ENST00000414479 KDM4AO75164 1064 aa12.6□□□□□ -0.39
SMC4P1-201ENST00000414479 HOXB1P14653 301 aaPredicted RBP12.6□□□□□ -0.39
SMC4P1-201ENST00000414479 HDGFP51858 240 aaKnown RBP12.59□□□□□ -0.39
SMC4P1-201ENST00000414479 KCNK17Q96T54 332 aa12.59□□□□□ -0.39
SMC4P1-201ENST00000414479 ZBTB3Q9H5J0 574 aa12.59□□□□□ -0.39
SMC4P1-201ENST00000414479 LILRB3O75022 631 aa12.58□□□□□ -0.4
SMC4P1-201ENST00000414479 AP1G2O75843 785 aa12.58□□□□□ -0.4
SMC4P1-201ENST00000414479 ZBTB7CA1YPR0 619 aa12.57□□□□□ -0.4
SMC4P1-201ENST00000414479 POTEJP0CG39 1038 aa12.57□□□□□ -0.4
SMC4P1-201ENST00000414479 MTMR14Q8NCE2 650 aa12.57□□□□□ -0.4
SMC4P1-201ENST00000414479 PLSCR2Q9NRY7 297 aa12.57□□□□□ -0.4
SMC4P1-201ENST00000414479 TRIM26Q12899 539 aaPredicted RBP12.55□□□□□ -0.4
SMC4P1-201ENST00000414479 GDPD2Q9HCC8 539 aa12.55□□□□□ -0.4
SMC4P1-201ENST00000414479 USP17L8P0C7I0 530 aa12.54□□□□□ -0.4
SMC4P1-201ENST00000414479 NDUFV2P19404 249 aa12.54□□□□□ -0.4
SMC4P1-201ENST00000414479 ABL2P42684 1182 aa12.54□□□□□ -0.4
SMC4P1-201ENST00000414479 QPCTQ16769 361 aa12.54□□□□□ -0.4
SMC4P1-201ENST00000414479 PROX2Q3B8N5 592 aa12.54□□□□□ -0.4
SMC4P1-201ENST00000414479 GRIPAP1Q4V328 841 aa12.54□□□□□ -0.4
SMC4P1-201ENST00000414479 GCGRP47871 477 aa12.53□□□□□ -0.4
SMC4P1-201ENST00000414479 SMAPO00193 183 aa12.52□□□□□ -0.41
SMC4P1-201ENST00000414479 HOXA2O43364 376 aa12.52□□□□□ -0.41
SMC4P1-201ENST00000414479 FDX1P10109 184 aa12.52□□□□□ -0.41
SMC4P1-201ENST00000414479 HELBQ8NG08 1087 aaPredicted RBP12.52□□□□□ -0.41
SMC4P1-201ENST00000414479 C3orf80F5H4A9 247 aa12.51□□□□□ -0.41
SMC4P1-201ENST00000414479 CALR3Q96L12 384 aaKnown RBP12.51□□□□□ -0.41
SMC4P1-201ENST00000414479 KIAA1468Q9P260 1216 aa12.51□□□□□ -0.41
SMC4P1-201ENST00000414479 NDUFB9Q9Y6M9 179 aa12.51□□□□□ -0.41
SMC4P1-201ENST00000414479 FBXO31Q5XUX0 539 aaPredicted RBP12.5□□□□□ -0.41
SMC4P1-201ENST00000414479 PCDHB15Q9Y5E8 787 aa12.5□□□□□ -0.41
SMC4P1-201ENST00000414479 POTEB2H3BUK9 544 aa12.49□□□□□ -0.41
SMC4P1-201ENST00000414479 HRCP23327 699 aa12.49□□□□□ -0.41
SMC4P1-201ENST00000414479 RTL5Q5HYW3 569 aaPredicted RBP12.49□□□□□ -0.41
SMC4P1-201ENST00000414479 ZBED2Q9BTP6 218 aa12.49□□□□□ -0.41
SMC4P1-201ENST00000414479 RABGEF1Q9UJ41 708 aa12.49□□□□□ -0.41
SMC4P1-201ENST00000414479 MTMR2Q13614 643 aa12.47□□□□□ -0.41
SMC4P1-201ENST00000414479 SLF2Q8IX21 1173 aa12.47□□□□□ -0.41
SMC4P1-201ENST00000414479 CABLES1Q8TDN4 633 aa12.47□□□□□ -0.41
SMC4P1-201ENST00000414479 TBC1D2BQ9UPU7 963 aa12.47□□□□□ -0.41
SMC4P1-201ENST00000414479 WASHC4Q2M389 1173 aa12.46□□□□□ -0.41
SMC4P1-201ENST00000414479 SWT1Q5T5J6 900 aaKnown RBP12.46□□□□□ -0.41
SMC4P1-201ENST00000414479 SLC4A5Q9BY07 1137 aa12.46□□□□□ -0.41
SMC4P1-201ENST00000414479 PPP1R15AO75807 674 aaPredicted RBP12.45□□□□□ -0.42
SMC4P1-201ENST00000414479 PDE4CQ08493 712 aa12.45□□□□□ -0.42
SMC4P1-201ENST00000414479 NECTIN2Q92692 538 aa12.45□□□□□ -0.42
SMC4P1-201ENST00000414479 ARHGAP33O14559 1287 aa12.44□□□□□ -0.42
SMC4P1-201ENST00000414479 FAM98CQ17RN3 349 aaKnown RBP12.44□□□□□ -0.42
SMC4P1-201ENST00000414479 GLMNQ92990 594 aa12.44□□□□□ -0.42
SMC4P1-201ENST00000414479 KCTD17Q8N5Z5 321 aa12.43□□□□□ -0.42
SMC4P1-201ENST00000414479 TSC1Q92574 1164 aa12.42□□□□□ -0.42
SMC4P1-201ENST00000414479 TRAIPQ9BWF2 469 aa12.42□□□□□ -0.42
SMC4P1-201ENST00000414479 ACIN1Q9UKV3 1341 aaKnown RBP12.41□□□□□ -0.42
SMC4P1-201ENST00000414479 PBX2P40425 430 aa12.41□□□□□ -0.42
SMC4P1-201ENST00000414479 RANGAP1P46060 587 aaPredicted RBP12.41□□□□□ -0.42
SMC4P1-201ENST00000414479 NBPF3Q9H094 633 aa12.41□□□□□ -0.42
SMC4P1-201ENST00000414479 ERBB3P21860 1342 aa12.4□□□□□ -0.42
SMC4P1-201ENST00000414479 SLC10A3P09131 477 aa12.4□□□□□ -0.42
SMC4P1-201ENST00000414479 LAPTM4BQ86VI4 370 aa12.4□□□□□ -0.42
SMC4P1-201ENST00000414479 SEPT9Q9UHD8 586 aaPredicted RBP12.4□□□□□ -0.42
SMC4P1-201ENST00000414479 C6orf229H3BNL8 230 aa12.39□□□□□ -0.43
SMC4P1-201ENST00000414479 PSEN2P49810 448 aa12.39□□□□□ -0.43
SMC4P1-201ENST00000414479 KMT5BQ4FZB7 885 aa12.38□□□□□ -0.43
SMC4P1-201ENST00000414479 PNMA1Q8ND90 353 aa12.38□□□□□ -0.43
SMC4P1-201ENST00000414479 GJD4Q96KN9 370 aaPredicted RBP12.38□□□□□ -0.43
SMC4P1-201ENST00000414479 PCDHGC3Q9UN70 934 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms