RNA–Protein interactions for RNA: ENST00000414331.5

PTPA-209, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 681 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-209ENST00000414331 RIMS2Q9UQ26 1411 aa23.94■■□□□ 1.42
PTPA-209ENST00000414331 PPP1R15AO75807 674 aaPredicted RBP23.94■■□□□ 1.42
PTPA-209ENST00000414331 BCANQ96GW7 911 aa23.94■■□□□ 1.42
PTPA-209ENST00000414331 NWD1Q149M9 1564 aa23.94■■□□□ 1.42
PTPA-209ENST00000414331 SLC26A8Q96RN1 970 aa23.93■■□□□ 1.42
PTPA-209ENST00000414331 CHGAP10645 457 aaKnown RBP23.92■■□□□ 1.42
PTPA-209ENST00000414331 HDGFP51858 240 aaKnown RBP23.92■■□□□ 1.42
PTPA-209ENST00000414331 SPHKAPQ2M3C7 1700 aa23.92■■□□□ 1.42
PTPA-209ENST00000414331 PLEKHG1Q9ULL1 1385 aa23.91■■□□□ 1.42
PTPA-209ENST00000414331 NKTRP30414 1462 aaKnown RBP23.91■■□□□ 1.42
PTPA-209ENST00000414331 KCNA6P17658 529 aa23.9■■□□□ 1.42
PTPA-209ENST00000414331 MED1Q15648 1581 aaPredicted RBP23.87■■□□□ 1.41
PTPA-209ENST00000414331 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.87■■□□□ 1.41
PTPA-209ENST00000414331 TMEM94Q12767 1356 aa23.87■■□□□ 1.41
PTPA-209ENST00000414331 CHD2O14647 1828 aaKnown RBP23.86■■□□□ 1.41
PTPA-209ENST00000414331 DIP2AQ14689 1571 aa23.86■■□□□ 1.41
PTPA-209ENST00000414331 ILDR2Q71H61 639 aa23.85■■□□□ 1.41
PTPA-209ENST00000414331 SENP3Q9H4L4 574 aaPredicted RBP23.84■■□□□ 1.41
PTPA-209ENST00000414331 PROSER2Q86WR7 435 aaPredicted RBP23.83■■□□□ 1.41
PTPA-209ENST00000414331 NAIPQ13075 1403 aa23.83■■□□□ 1.4
PTPA-209ENST00000414331 NUTM2DQ5VT03 806 aaPredicted RBP23.78■■□□□ 1.4
PTPA-209ENST00000414331 TRPM2O94759 1503 aa23.78■■□□□ 1.4
PTPA-209ENST00000414331 MSH6P52701 1360 aa23.78■■□□□ 1.4
PTPA-209ENST00000414331 HFM1A2PYH4 1435 aa23.77■■□□□ 1.4
PTPA-209ENST00000414331 TBX22Q9Y458 520 aa23.77■■□□□ 1.4
PTPA-209ENST00000414331 ADAMTS13Q76LX8 1427 aa23.76■■□□□ 1.39
PTPA-209ENST00000414331 CLTCL1P53675 1640 aa23.76■■□□□ 1.39
PTPA-209ENST00000414331 ROBO1Q9Y6N7 1651 aa23.76■■□□□ 1.39
PTPA-209ENST00000414331 RBM33Q96EV2 1170 aaKnown RBP23.75■■□□□ 1.39
PTPA-209ENST00000414331 KIF1BO60333 1816 aa23.75■■□□□ 1.39
PTPA-209ENST00000414331 FAM135BQ49AJ0 1406 aa23.75■■□□□ 1.39
PTPA-209ENST00000414331 PIK3R4Q99570 1358 aa23.74■■□□□ 1.39
PTPA-209ENST00000414331 SOCS7O14512 581 aa23.73■■□□□ 1.39
PTPA-209ENST00000414331 ZNF326Q5BKZ1 582 aaKnown RBP23.72■■□□□ 1.39
PTPA-209ENST00000414331 SETBP1Q9Y6X0 1596 aa23.71■■□□□ 1.39
PTPA-209ENST00000414331 TRIM52Q96A61 297 aa23.7■■□□□ 1.38
PTPA-209ENST00000414331 PHF23Q9BUL5 403 aaPredicted RBP23.7■■□□□ 1.38
PTPA-209ENST00000414331 NRXN3Q9Y4C0 1643 aa23.7■■□□□ 1.38
PTPA-209ENST00000414331 NCOA3Q9Y6Q9 1424 aa23.69■■□□□ 1.38
PTPA-209ENST00000414331 NEXMIFQ5QGS0 1516 aa23.68■■□□□ 1.38
PTPA-209ENST00000414331 C14orf37Q86TY3 774 aa23.67■■□□□ 1.38
PTPA-209ENST00000414331 XRN1Q8IZH2 1706 aaKnown RBP23.65■■□□□ 1.38
PTPA-209ENST00000414331 PHLPP1O60346 1717 aa23.64■■□□□ 1.37
PTPA-209ENST00000414331 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.64■■□□□ 1.37
PTPA-209ENST00000414331 SLC4A1APQ9BWU0 796 aaKnown RBP23.63■■□□□ 1.37
PTPA-209ENST00000414331 PTPRUQ92729 1446 aa23.62■■□□□ 1.37
PTPA-209ENST00000414331 SLAIN2Q9P270 581 aa23.62■■□□□ 1.37
PTPA-209ENST00000414331 AMOTL2Q9Y2J4 779 aa23.61■■□□□ 1.37
PTPA-209ENST00000414331 ATF3P18847 181 aa23.57■■□□□ 1.36
PTPA-209ENST00000414331 CADPS2Q86UW7 1296 aa23.57■■□□□ 1.36
PTPA-209ENST00000414331 C19orf44Q9H6X5 657 aa23.56■■□□□ 1.36
PTPA-209ENST00000414331 PPLO60437 1756 aa23.55■■□□□ 1.36
PTPA-209ENST00000414331 DCCP43146 1447 aa23.55■■□□□ 1.36
PTPA-209ENST00000414331 METP08581 1390 aa23.54■■□□□ 1.36
PTPA-209ENST00000414331 COL16A1Q07092 1604 aaPredicted RBP23.53■■□□□ 1.36
PTPA-209ENST00000414331 SETD1AO15047 1707 aaKnown RBP23.52■■□□□ 1.36
PTPA-209ENST00000414331 AHDC1Q5TGY3 1603 aaPredicted RBP23.51■■□□□ 1.35
PTPA-209ENST00000414331 VGFO15240 615 aaPredicted RBP23.5■■□□□ 1.35
PTPA-209ENST00000414331 RPGRIP1LQ68CZ1 1315 aa23.5■■□□□ 1.35
PTPA-209ENST00000414331 JCADQ9P266 1359 aa23.5■■□□□ 1.35
PTPA-209ENST00000414331 CCDC144AA2RUR9 1427 aa23.5■■□□□ 1.35
PTPA-209ENST00000414331 NALCNQ8IZF0 1738 aa23.49■■□□□ 1.35
PTPA-209ENST00000414331 FOXD1Q16676 465 aa23.47■■□□□ 1.35
PTPA-209ENST00000414331 ADGRL3Q9HAR2 1447 aa23.47■■□□□ 1.35
PTPA-209ENST00000414331 PTCH1Q13635 1447 aa23.45■■□□□ 1.34
PTPA-209ENST00000414331 ASXL1Q8IXJ9 1541 aa23.44■■□□□ 1.34
PTPA-209ENST00000414331 ACIN1Q9UKV3 1341 aaKnown RBP23.44■■□□□ 1.34
PTPA-209ENST00000414331 SHPRHQ149N8 1683 aa23.44■■□□□ 1.34
PTPA-209ENST00000414331 MST1RQ04912 1400 aa23.43■■□□□ 1.34
PTPA-209ENST00000414331 IFT172Q9UG01 1749 aa23.43■■□□□ 1.34
PTPA-209ENST00000414331 MPHOSPH9Q99550 1183 aa23.43■■□□□ 1.34
PTPA-209ENST00000414331 NHSL1Q5SYE7 1610 aa23.41■■□□□ 1.34
PTPA-209ENST00000414331 BRINP3Q76B58 766 aa23.41■■□□□ 1.34
PTPA-209ENST00000414331 PRAG1Q86YV5 1406 aa23.41■■□□□ 1.34
PTPA-209ENST00000414331 SETD5Q9C0A6 1442 aa23.41■■□□□ 1.34
PTPA-209ENST00000414331 RGS17Q9UGC6 210 aaPredicted RBP23.4■■□□□ 1.34
PTPA-209ENST00000414331 SPATA31A6Q5VVP1 1343 aa23.38■■□□□ 1.33
PTPA-209ENST00000414331 SPATA31E1Q6ZUB1 1445 aa23.38■■□□□ 1.33
PTPA-209ENST00000414331 ANKRD30BQ9BXX2 1392 aa23.36■■□□□ 1.33
PTPA-209ENST00000414331 ROBO2Q9HCK4 1378 aa23.36■■□□□ 1.33
PTPA-209ENST00000414331 RGL3Q3MIN7 710 aa23.35■■□□□ 1.33
PTPA-209ENST00000414331 LRP6O75581 1613 aa23.34■■□□□ 1.33
PTPA-209ENST00000414331 MEX3CQ5U5Q3 659 aaKnown RBP23.33■■□□□ 1.33
PTPA-209ENST00000414331 ADGRF5Q8IZF2 1346 aa23.33■■□□□ 1.32
PTPA-209ENST00000414331 C1orf167Q5SNV9 1468 aa23.31■■□□□ 1.32
PTPA-209ENST00000414331 KNDC1Q76NI1 1749 aa23.31■■□□□ 1.32
PTPA-209ENST00000414331 RAB3GAP2Q9H2M9 1393 aa23.31■■□□□ 1.32
PTPA-209ENST00000414331 CDC42BPGQ6DT37 1551 aa23.3■■□□□ 1.32
PTPA-209ENST00000414331 PIK3C2GO75747 1445 aa23.29■■□□□ 1.32
PTPA-209ENST00000414331 POTEAQ6S8J7 498 aa23.29■■□□□ 1.32
PTPA-209ENST00000414331 LAMC1P11047 1609 aa23.27■■□□□ 1.32
PTPA-209ENST00000414331 TECPR2O15040 1411 aa23.25■■□□□ 1.31
PTPA-209ENST00000414331 LRRC59Q96AG4 307 aaKnown RBP23.25■■□□□ 1.31
PTPA-209ENST00000414331 LRPPRCP42704 1394 aaKnown RBP23.25■■□□□ 1.31
PTPA-209ENST00000414331 MYOM2P54296 1465 aa23.24■■□□□ 1.31
PTPA-209ENST00000414331 NUTM2BA6NNL0 878 aaPredicted RBP23.23■■□□□ 1.31
PTPA-209ENST00000414331 NUTM2EB1AL46 878 aaPredicted RBP23.23■■□□□ 1.31
PTPA-209ENST00000414331 NUTM2AQ8IVF1 878 aaPredicted RBP23.23■■□□□ 1.31
PTPA-209ENST00000414331 STK26Q9P289 416 aa23.23■■□□□ 1.31
PTPA-209ENST00000414331 DDX17Q92841 729 aaKnown RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms