RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 ANKK1Q8NFD2 765 aa11.52□□□□□ -0.56
CSNK2A1-204ENST00000400227 WNT2BQ93097 391 aa11.52□□□□□ -0.56
CSNK2A1-204ENST00000400227 HDGFP51858 240 aaKnown RBP11.51□□□□□ -0.57
CSNK2A1-204ENST00000400227 SWT1Q5T5J6 900 aaKnown RBP11.51□□□□□ -0.57
CSNK2A1-204ENST00000400227 SAMD7Q7Z3H4 446 aa11.51□□□□□ -0.57
CSNK2A1-204ENST00000400227 MDM2Q00987 491 aaPredicted RBP11.5□□□□□ -0.57
CSNK2A1-204ENST00000400227 PDE4DQ08499 809 aa11.5□□□□□ -0.57
CSNK2A1-204ENST00000400227 LRCH3Q96II8 777 aa11.5□□□□□ -0.57
CSNK2A1-204ENST00000400227 DAXXQ9UER7 740 aaPredicted RBP11.5□□□□□ -0.57
CSNK2A1-204ENST00000400227 CLCN1P35523 988 aa11.49□□□□□ -0.57
CSNK2A1-204ENST00000400227 KCTD12Q96CX2 325 aaKnown RBP11.49□□□□□ -0.57
CSNK2A1-204ENST00000400227 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.49□□□□□ -0.57
CSNK2A1-204ENST00000400227 SOWAHBA6NEL2 793 aa11.48□□□□□ -0.57
CSNK2A1-204ENST00000400227 TMUB1Q9BVT8 246 aa11.48□□□□□ -0.57
CSNK2A1-204ENST00000400227 GPCPD1Q9NPB8 672 aa11.48□□□□□ -0.57
CSNK2A1-204ENST00000400227 TTLL12Q14166 644 aaPredicted RBP11.47□□□□□ -0.57
CSNK2A1-204ENST00000400227 BCAMP50895 628 aa11.46□□□□□ -0.57
CSNK2A1-204ENST00000400227 THSD4Q6ZMP0 1018 aa11.46□□□□□ -0.57
CSNK2A1-204ENST00000400227 RNF166Q96A37 237 aaPredicted RBP11.46□□□□□ -0.57
CSNK2A1-204ENST00000400227 REPIN1Q9BWE0 567 aaKnown RBP11.46□□□□□ -0.57
CSNK2A1-204ENST00000400227 SLF2Q8IX21 1173 aa11.45□□□□□ -0.58
CSNK2A1-204ENST00000400227 PARP9Q8IXQ6 854 aa11.45□□□□□ -0.58
CSNK2A1-204ENST00000400227 SLC4A3P48751 1232 aa11.44□□□□□ -0.58
CSNK2A1-204ENST00000400227 RNF40O75150 1001 aa11.42□□□□□ -0.58
CSNK2A1-204ENST00000400227 GIGYF2Q6Y7W6 1299 aaKnown RBP11.42□□□□□ -0.58
CSNK2A1-204ENST00000400227 SULF1Q8IWU6 871 aa11.42□□□□□ -0.58
CSNK2A1-204ENST00000400227 FAM217BQ9NTX9 383 aaPredicted RBP11.42□□□□□ -0.58
CSNK2A1-204ENST00000400227 TSR3Q9UJK0 312 aaKnown RBP11.41□□□□□ -0.58
CSNK2A1-204ENST00000400227 HPS5Q9UPZ3 1129 aa11.41□□□□□ -0.58
CSNK2A1-204ENST00000400227 DDX11L8A8MPP1 907 aa11.4□□□□□ -0.58
CSNK2A1-204ENST00000400227 SLC10A3P09131 477 aa11.39□□□□□ -0.59
CSNK2A1-204ENST00000400227 NECTIN2Q92692 538 aa11.39□□□□□ -0.59
CSNK2A1-204ENST00000400227 SSTR3P32745 418 aaPredicted RBP11.38□□□□□ -0.59
CSNK2A1-204ENST00000400227 PPP4CP60510 307 aa11.38□□□□□ -0.59
CSNK2A1-204ENST00000400227 RSPH4AQ5TD94 716 aa11.38□□□□□ -0.59
CSNK2A1-204ENST00000400227 BRPF1P55201 1214 aaPredicted RBP11.38□□□□□ -0.59
CSNK2A1-204ENST00000400227 GPBP1L1Q9HC44 474 aaPredicted RBP11.38□□□□□ -0.59
CSNK2A1-204ENST00000400227 CD46P15529 392 aa11.37□□□□□ -0.59
CSNK2A1-204ENST00000400227 PTPN5P54829 565 aa11.37□□□□□ -0.59
CSNK2A1-204ENST00000400227 NEUROD2Q15784 382 aa11.37□□□□□ -0.59
CSNK2A1-204ENST00000400227 RDH13Q8NBN7 331 aa11.37□□□□□ -0.59
CSNK2A1-204ENST00000400227 KDM4CQ9H3R0 1056 aa11.37□□□□□ -0.59
CSNK2A1-204ENST00000400227 WBP1LQ9NX94 342 aa11.37□□□□□ -0.59
CSNK2A1-204ENST00000400227 MS4A1P11836 297 aa11.35□□□□□ -0.59
CSNK2A1-204ENST00000400227 HCSTQ9UBK5 93 aa11.34□□□□□ -0.59
CSNK2A1-204ENST00000400227 CFHP08603 1231 aa11.33□□□□□ -0.6
CSNK2A1-204ENST00000400227 NYAP1Q6ZVC0 841 aa11.33□□□□□ -0.6
CSNK2A1-204ENST00000400227 GCGRP47871 477 aa11.32□□□□□ -0.6
CSNK2A1-204ENST00000400227 APLP1P51693 650 aa11.31□□□□□ -0.6
CSNK2A1-204ENST00000400227 KMT5BQ4FZB7 885 aa11.31□□□□□ -0.6
CSNK2A1-204ENST00000400227 PRR14Q9BWN1 585 aa11.31□□□□□ -0.6
CSNK2A1-204ENST00000400227 MYO15BQ96JP2 1530 aa11.3□□□□□ -0.6
CSNK2A1-204ENST00000400227 BEGAINQ9BUH8 593 aa11.3□□□□□ -0.6
CSNK2A1-204ENST00000400227 ACTN4O43707 911 aaKnown RBP11.27□□□□□ -0.6
CSNK2A1-204ENST00000400227 FAM117AQ9C073 453 aa11.26□□□□□ -0.61
CSNK2A1-204ENST00000400227 KDM4AO75164 1064 aa11.25□□□□□ -0.61
CSNK2A1-204ENST00000400227 DDRGK1Q96HY6 314 aa11.25□□□□□ -0.61
CSNK2A1-204ENST00000400227 ABCC9O60706 1549 aa11.24□□□□□ -0.61
CSNK2A1-204ENST00000400227 FUT2Q10981 343 aa11.24□□□□□ -0.61
CSNK2A1-204ENST00000400227 NUTM1Q86Y26 1132 aa11.24□□□□□ -0.61
CSNK2A1-204ENST00000400227 USP46P62068 366 aa11.23□□□□□ -0.61
CSNK2A1-204ENST00000400227 SPIRE2Q8WWL2 714 aa11.23□□□□□ -0.61
CSNK2A1-204ENST00000400227 PCDHB3Q9Y5E6 796 aa11.22□□□□□ -0.61
CSNK2A1-204ENST00000400227 PLEKHG3A1L390 1219 aa11.21□□□□□ -0.61
CSNK2A1-204ENST00000400227 ATP6V1AP38606 617 aa11.21□□□□□ -0.61
CSNK2A1-204ENST00000400227 DIXDC1Q155Q3 683 aa11.21□□□□□ -0.61
CSNK2A1-204ENST00000400227 TBC1D2Q9BYX2 928 aa11.2□□□□□ -0.62
CSNK2A1-204ENST00000400227 GRIPAP1Q4V328 841 aa11.19□□□□□ -0.62
CSNK2A1-204ENST00000400227 SCRIBQ14160 1630 aa11.19□□□□□ -0.62
CSNK2A1-204ENST00000400227 HOXA2O43364 376 aa11.19□□□□□ -0.62
CSNK2A1-204ENST00000400227 IL27Q8NEV9 243 aa11.19□□□□□ -0.62
CSNK2A1-204ENST00000400227 PUS10Q3MIT2 529 aaKnown RBP11.18□□□□□ -0.62
CSNK2A1-204ENST00000400227 MORN1Q5T089 497 aa11.18□□□□□ -0.62
CSNK2A1-204ENST00000400227 BLOC1S3Q6QNY0 202 aa11.18□□□□□ -0.62
CSNK2A1-204ENST00000400227 TJAP1Q5JTD0 557 aa11.17□□□□□ -0.62
CSNK2A1-204ENST00000400227 MTRQ99707 1265 aa11.17□□□□□ -0.62
CSNK2A1-204ENST00000400227 RSPH6AQ9H0K4 717 aa11.17□□□□□ -0.62
CSNK2A1-204ENST00000400227 COPS2P61201 443 aa11.16□□□□□ -0.62
CSNK2A1-204ENST00000400227 MYSM1Q5VVJ2 828 aa11.15□□□□□ -0.62
CSNK2A1-204ENST00000400227 IL21Q9HBE4 155 aa11.15□□□□□ -0.62
CSNK2A1-204ENST00000400227 MOXD2PA6NHM9 499 aa11.14□□□□□ -0.63
CSNK2A1-204ENST00000400227 NR1I2O75469 434 aa11.14□□□□□ -0.63
CSNK2A1-204ENST00000400227 ITGBL1O95965 494 aaPredicted RBP11.14□□□□□ -0.63
CSNK2A1-204ENST00000400227 HLA-CQ95604 372 aa11.14□□□□□ -0.63
CSNK2A1-204ENST00000400227 NDUFV2P19404 249 aa11.13□□□□□ -0.63
CSNK2A1-204ENST00000400227 SH3D19Q5HYK7 790 aa11.13□□□□□ -0.63
CSNK2A1-204ENST00000400227 SLC27A5Q9Y2P5 690 aa11.13□□□□□ -0.63
CSNK2A1-204ENST00000400227 NACADO15069 1562 aa11.13□□□□□ -0.63
CSNK2A1-204ENST00000400227 GJA5P36382 358 aa11.12□□□□□ -0.63
CSNK2A1-204ENST00000400227 RSBN1LQ6PCB5 846 aaPredicted RBP11.12□□□□□ -0.63
CSNK2A1-204ENST00000400227 SCUBE3Q8IX30 993 aa11.12□□□□□ -0.63
CSNK2A1-204ENST00000400227 SPTLC1O15269 473 aa11.12□□□□□ -0.63
CSNK2A1-204ENST00000400227 GUCA2AQ02747 115 aa11.12□□□□□ -0.63
CSNK2A1-204ENST00000400227 RIC3Q7Z5B4 369 aa11.12□□□□□ -0.63
CSNK2A1-204ENST00000400227 ZPR1O75312 459 aa11.11□□□□□ -0.63
CSNK2A1-204ENST00000400227 FDX1P10109 184 aa11.11□□□□□ -0.63
CSNK2A1-204ENST00000400227 GOPCQ9HD26 462 aa11.11□□□□□ -0.63
CSNK2A1-204ENST00000400227 KCNC4Q03721 635 aa11.1□□□□□ -0.63
CSNK2A1-204ENST00000400227 SKIV2LQ15477 1246 aaKnown RBP11.1□□□□□ -0.63
CSNK2A1-204ENST00000400227 ZNF516Q92618 1163 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms