RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 NUP155O75694 1391 aa27.6■■■□□ 2.01
CXCL12-204ENST00000395793 SLC26A8Q96RN1 970 aa27.59■■■□□ 2.01
CXCL12-204ENST00000395793 NWD1Q149M9 1564 aa27.59■■■□□ 2.01
CXCL12-204ENST00000395793 RIMS2Q9UQ26 1411 aa27.58■■■□□ 2
CXCL12-204ENST00000395793 SENP3Q9H4L4 574 aaPredicted RBP27.54■■■□□ 2
CXCL12-204ENST00000395793 SPHKAPQ2M3C7 1700 aa27.53■■■□□ 2
CXCL12-204ENST00000395793 PLEKHG1Q9ULL1 1385 aa27.53■■■□□ 2
CXCL12-204ENST00000395793 KCNA6P17658 529 aa27.52■■■□□ 2
CXCL12-204ENST00000395793 TMEM94Q12767 1356 aa27.51■■□□□ 1.99
CXCL12-204ENST00000395793 CHD2O14647 1828 aaKnown RBP27.51■■□□□ 1.99
CXCL12-204ENST00000395793 MED1Q15648 1581 aaPredicted RBP27.51■■□□□ 1.99
CXCL12-204ENST00000395793 NKTRP30414 1462 aaKnown RBP27.5■■□□□ 1.99
CXCL12-204ENST00000395793 NAIPQ13075 1403 aa27.5■■□□□ 1.99
CXCL12-204ENST00000395793 CHGAP10645 457 aaKnown RBP27.49■■□□□ 1.99
CXCL12-204ENST00000395793 RBM33Q96EV2 1170 aaKnown RBP27.46■■□□□ 1.99
CXCL12-204ENST00000395793 BCANQ96GW7 911 aa27.45■■□□□ 1.98
CXCL12-204ENST00000395793 ADAMTS13Q76LX8 1427 aa27.44■■□□□ 1.98
CXCL12-204ENST00000395793 PPP1R15AO75807 674 aaPredicted RBP27.44■■□□□ 1.98
CXCL12-204ENST00000395793 NUTM2DQ5VT03 806 aaPredicted RBP27.44■■□□□ 1.98
CXCL12-204ENST00000395793 PROSER2Q86WR7 435 aaPredicted RBP27.43■■□□□ 1.98
CXCL12-204ENST00000395793 CLTCL1P53675 1640 aa27.41■■□□□ 1.98
CXCL12-204ENST00000395793 DIP2AQ14689 1571 aa27.4■■□□□ 1.98
CXCL12-204ENST00000395793 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.4■■□□□ 1.98
CXCL12-204ENST00000395793 HDGFP51858 240 aaKnown RBP27.39■■□□□ 1.98
CXCL12-204ENST00000395793 NRXN3Q9Y4C0 1643 aa27.38■■□□□ 1.97
CXCL12-204ENST00000395793 TRPM2O94759 1503 aa27.37■■□□□ 1.97
CXCL12-204ENST00000395793 ROBO1Q9Y6N7 1651 aa27.37■■□□□ 1.97
CXCL12-204ENST00000395793 HFM1A2PYH4 1435 aa27.37■■□□□ 1.97
CXCL12-204ENST00000395793 TBX22Q9Y458 520 aa27.37■■□□□ 1.97
CXCL12-204ENST00000395793 FAM135BQ49AJ0 1406 aa27.35■■□□□ 1.97
CXCL12-204ENST00000395793 SOCS7O14512 581 aa27.33■■□□□ 1.97
CXCL12-204ENST00000395793 SETBP1Q9Y6X0 1596 aa27.31■■□□□ 1.96
CXCL12-204ENST00000395793 PTPRUQ92729 1446 aa27.31■■□□□ 1.96
CXCL12-204ENST00000395793 KIF1BO60333 1816 aa27.3■■□□□ 1.96
CXCL12-204ENST00000395793 MSH6P52701 1360 aa27.3■■□□□ 1.96
CXCL12-204ENST00000395793 NEXMIFQ5QGS0 1516 aa27.3■■□□□ 1.96
CXCL12-204ENST00000395793 PIK3R4Q99570 1358 aa27.29■■□□□ 1.96
CXCL12-204ENST00000395793 XRN1Q8IZH2 1706 aaKnown RBP27.27■■□□□ 1.96
CXCL12-204ENST00000395793 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.25■■□□□ 1.95
CXCL12-204ENST00000395793 NCOA3Q9Y6Q9 1424 aa27.24■■□□□ 1.95
CXCL12-204ENST00000395793 ZNF326Q5BKZ1 582 aaKnown RBP27.23■■□□□ 1.95
CXCL12-204ENST00000395793 TRIM52Q96A61 297 aa27.23■■□□□ 1.95
CXCL12-204ENST00000395793 PHLPP1O60346 1717 aa27.2■■□□□ 1.94
CXCL12-204ENST00000395793 AMOTL2Q9Y2J4 779 aa27.2■■□□□ 1.94
CXCL12-204ENST00000395793 SLAIN2Q9P270 581 aa27.19■■□□□ 1.94
CXCL12-204ENST00000395793 METP08581 1390 aa27.18■■□□□ 1.94
CXCL12-204ENST00000395793 SETD1AO15047 1707 aaKnown RBP27.17■■□□□ 1.94
CXCL12-204ENST00000395793 SLC4A1APQ9BWU0 796 aaKnown RBP27.17■■□□□ 1.94
CXCL12-204ENST00000395793 PHF23Q9BUL5 403 aaPredicted RBP27.16■■□□□ 1.94
CXCL12-204ENST00000395793 COL16A1Q07092 1604 aaPredicted RBP27.15■■□□□ 1.94
CXCL12-204ENST00000395793 C14orf37Q86TY3 774 aa27.14■■□□□ 1.94
CXCL12-204ENST00000395793 PPLO60437 1756 aa27.14■■□□□ 1.93
CXCL12-204ENST00000395793 C19orf44Q9H6X5 657 aa27.12■■□□□ 1.93
CXCL12-204ENST00000395793 FOXD1Q16676 465 aa27.11■■□□□ 1.93
CXCL12-204ENST00000395793 RGS17Q9UGC6 210 aaPredicted RBP27.09■■□□□ 1.93
CXCL12-204ENST00000395793 NALCNQ8IZF0 1738 aa27.09■■□□□ 1.93
CXCL12-204ENST00000395793 AHDC1Q5TGY3 1603 aaPredicted RBP27.08■■□□□ 1.93
CXCL12-204ENST00000395793 CADPS2Q86UW7 1296 aa27.07■■□□□ 1.92
CXCL12-204ENST00000395793 DCCP43146 1447 aa27.07■■□□□ 1.92
CXCL12-204ENST00000395793 ATF3P18847 181 aa27.05■■□□□ 1.92
CXCL12-204ENST00000395793 IFT172Q9UG01 1749 aa27.02■■□□□ 1.92
CXCL12-204ENST00000395793 MST1RQ04912 1400 aa27.02■■□□□ 1.92
CXCL12-204ENST00000395793 ADGRL3Q9HAR2 1447 aa27.02■■□□□ 1.92
CXCL12-204ENST00000395793 JCADQ9P266 1359 aa27.02■■□□□ 1.92
CXCL12-204ENST00000395793 RPGRIP1LQ68CZ1 1315 aa27■■□□□ 1.91
CXCL12-204ENST00000395793 VGFO15240 615 aaPredicted RBP27■■□□□ 1.91
CXCL12-204ENST00000395793 BRINP3Q76B58 766 aa27■■□□□ 1.91
CXCL12-204ENST00000395793 MPHOSPH9Q99550 1183 aa27■■□□□ 1.91
CXCL12-204ENST00000395793 ASXL1Q8IXJ9 1541 aa27■■□□□ 1.91
CXCL12-204ENST00000395793 SPATA31E1Q6ZUB1 1445 aa26.99■■□□□ 1.91
CXCL12-204ENST00000395793 CCDC144AA2RUR9 1427 aa26.99■■□□□ 1.91
CXCL12-204ENST00000395793 PTCH1Q13635 1447 aa26.99■■□□□ 1.91
CXCL12-204ENST00000395793 SHPRHQ149N8 1683 aa26.98■■□□□ 1.91
CXCL12-204ENST00000395793 NHSL1Q5SYE7 1610 aa26.98■■□□□ 1.91
CXCL12-204ENST00000395793 PRAG1Q86YV5 1406 aa26.98■■□□□ 1.91
CXCL12-204ENST00000395793 LRP6O75581 1613 aa26.97■■□□□ 1.91
CXCL12-204ENST00000395793 ROBO2Q9HCK4 1378 aa26.97■■□□□ 1.91
CXCL12-204ENST00000395793 SETD5Q9C0A6 1442 aa26.95■■□□□ 1.9
CXCL12-204ENST00000395793 ADGRF5Q8IZF2 1346 aa26.92■■□□□ 1.9
CXCL12-204ENST00000395793 POTEAQ6S8J7 498 aa26.92■■□□□ 1.9
CXCL12-204ENST00000395793 RGL3Q3MIN7 710 aa26.89■■□□□ 1.9
CXCL12-204ENST00000395793 RAB3GAP2Q9H2M9 1393 aa26.87■■□□□ 1.89
CXCL12-204ENST00000395793 SPATA31A6Q5VVP1 1343 aa26.87■■□□□ 1.89
CXCL12-204ENST00000395793 C1orf167Q5SNV9 1468 aa26.86■■□□□ 1.89
CXCL12-204ENST00000395793 DDX17Q92841 729 aaKnown RBP26.85■■□□□ 1.89
CXCL12-204ENST00000395793 ANKRD30BQ9BXX2 1392 aa26.84■■□□□ 1.89
CXCL12-204ENST00000395793 LAMC1P11047 1609 aa26.84■■□□□ 1.89
CXCL12-204ENST00000395793 PIK3C2GO75747 1445 aa26.83■■□□□ 1.89
CXCL12-204ENST00000395793 KNDC1Q76NI1 1749 aa26.83■■□□□ 1.89
CXCL12-204ENST00000395793 CDC42BPGQ6DT37 1551 aa26.8■■□□□ 1.88
CXCL12-204ENST00000395793 TECPR2O15040 1411 aa26.8■■□□□ 1.88
CXCL12-204ENST00000395793 LRPPRCP42704 1394 aaKnown RBP26.77■■□□□ 1.88
CXCL12-204ENST00000395793 ACIN1Q9UKV3 1341 aaKnown RBP26.77■■□□□ 1.88
CXCL12-204ENST00000395793 NRXN1Q9ULB1 1477 aa26.76■■□□□ 1.87
CXCL12-204ENST00000395793 ORAI2Q96SN7 254 aa26.76■■□□□ 1.87
CXCL12-204ENST00000395793 PNPLA6Q8IY17 1366 aa26.75■■□□□ 1.87
CXCL12-204ENST00000395793 TMEM132EQ6IEE7 984 aa26.75■■□□□ 1.87
CXCL12-204ENST00000395793 STK26Q9P289 416 aa26.75■■□□□ 1.87
CXCL12-204ENST00000395793 MYOM2P54296 1465 aa26.74■■□□□ 1.87
CXCL12-204ENST00000395793 MEX3CQ5U5Q3 659 aaKnown RBP26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms