RNA–Protein interactions for RNA: ENST00000393747.3

CTTN-204, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-204ENST00000393747 RIMS2Q9UQ26 1411 aa27.49■■□□□ 1.99
CTTN-204ENST00000393747 KCNA6P17658 529 aa27.47■■□□□ 1.99
CTTN-204ENST00000393747 PLEKHG1Q9ULL1 1385 aa27.46■■□□□ 1.99
CTTN-204ENST00000393747 XIRP1Q702N8 1843 aaKnown RBP27.45■■□□□ 1.98
CTTN-204ENST00000393747 TMEM94Q12767 1356 aa27.45■■□□□ 1.98
CTTN-204ENST00000393747 MYO5BQ9ULV0 1848 aa27.44■■□□□ 1.98
CTTN-204ENST00000393747 SENP3Q9H4L4 574 aaPredicted RBP27.43■■□□□ 1.98
CTTN-204ENST00000393747 NWD1Q149M9 1564 aa27.43■■□□□ 1.98
CTTN-204ENST00000393747 CHGAP10645 457 aaKnown RBP27.41■■□□□ 1.98
CTTN-204ENST00000393747 NAIPQ13075 1403 aa27.41■■□□□ 1.98
CTTN-204ENST00000393747 RBM33Q96EV2 1170 aaKnown RBP27.4■■□□□ 1.98
CTTN-204ENST00000393747 NKTRP30414 1462 aaKnown RBP27.39■■□□□ 1.98
CTTN-204ENST00000393747 PPP1R15AO75807 674 aaPredicted RBP27.38■■□□□ 1.97
CTTN-204ENST00000393747 BCANQ96GW7 911 aa27.38■■□□□ 1.97
CTTN-204ENST00000393747 ADAMTS13Q76LX8 1427 aa27.37■■□□□ 1.97
CTTN-204ENST00000393747 NUTM2DQ5VT03 806 aaPredicted RBP27.37■■□□□ 1.97
CTTN-204ENST00000393747 PROSER2Q86WR7 435 aaPredicted RBP27.36■■□□□ 1.97
CTTN-204ENST00000393747 MED1Q15648 1581 aaPredicted RBP27.35■■□□□ 1.97
CTTN-204ENST00000393747 HDGFP51858 240 aaKnown RBP27.35■■□□□ 1.97
CTTN-204ENST00000393747 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.35■■□□□ 1.97
CTTN-204ENST00000393747 TBX22Q9Y458 520 aa27.34■■□□□ 1.97
CTTN-204ENST00000393747 HFM1A2PYH4 1435 aa27.31■■□□□ 1.96
CTTN-204ENST00000393747 FAM135BQ49AJ0 1406 aa27.3■■□□□ 1.96
CTTN-204ENST00000393747 SPHKAPQ2M3C7 1700 aa27.28■■□□□ 1.96
CTTN-204ENST00000393747 SOCS7O14512 581 aa27.27■■□□□ 1.96
CTTN-204ENST00000393747 DIP2AQ14689 1571 aa27.26■■□□□ 1.95
CTTN-204ENST00000393747 CHD2O14647 1828 aaKnown RBP27.25■■□□□ 1.95
CTTN-204ENST00000393747 TRPM2O94759 1503 aa27.24■■□□□ 1.95
CTTN-204ENST00000393747 CLTCL1P53675 1640 aa27.23■■□□□ 1.95
CTTN-204ENST00000393747 PTPRUQ92729 1446 aa27.22■■□□□ 1.95
CTTN-204ENST00000393747 MSH6P52701 1360 aa27.22■■□□□ 1.95
CTTN-204ENST00000393747 PIK3R4Q99570 1358 aa27.22■■□□□ 1.95
CTTN-204ENST00000393747 NRXN3Q9Y4C0 1643 aa27.2■■□□□ 1.95
CTTN-204ENST00000393747 ROBO1Q9Y6N7 1651 aa27.18■■□□□ 1.94
CTTN-204ENST00000393747 NCOA3Q9Y6Q9 1424 aa27.18■■□□□ 1.94
CTTN-204ENST00000393747 SETBP1Q9Y6X0 1596 aa27.18■■□□□ 1.94
CTTN-204ENST00000393747 ZNF326Q5BKZ1 582 aaKnown RBP27.16■■□□□ 1.94
CTTN-204ENST00000393747 TRIM52Q96A61 297 aa27.16■■□□□ 1.94
CTTN-204ENST00000393747 NEXMIFQ5QGS0 1516 aa27.16■■□□□ 1.94
CTTN-204ENST00000393747 SLAIN2Q9P270 581 aa27.16■■□□□ 1.94
CTTN-204ENST00000393747 AMOTL2Q9Y2J4 779 aa27.15■■□□□ 1.94
CTTN-204ENST00000393747 METP08581 1390 aa27.13■■□□□ 1.93
CTTN-204ENST00000393747 SLC4A1APQ9BWU0 796 aaKnown RBP27.12■■□□□ 1.93
CTTN-204ENST00000393747 XRN1Q8IZH2 1706 aaKnown RBP27.09■■□□□ 1.93
CTTN-204ENST00000393747 PHF23Q9BUL5 403 aaPredicted RBP27.08■■□□□ 1.93
CTTN-204ENST00000393747 C14orf37Q86TY3 774 aa27.07■■□□□ 1.92
CTTN-204ENST00000393747 C19orf44Q9H6X5 657 aa27.07■■□□□ 1.92
CTTN-204ENST00000393747 FOXD1Q16676 465 aa27.05■■□□□ 1.92
CTTN-204ENST00000393747 RGS17Q9UGC6 210 aaPredicted RBP27.05■■□□□ 1.92
CTTN-204ENST00000393747 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.05■■□□□ 1.92
CTTN-204ENST00000393747 CADPS2Q86UW7 1296 aa27.04■■□□□ 1.92
CTTN-204ENST00000393747 KIF1BO60333 1816 aa27.01■■□□□ 1.91
CTTN-204ENST00000393747 ATF3P18847 181 aa27■■□□□ 1.91
CTTN-204ENST00000393747 DCCP43146 1447 aa26.99■■□□□ 1.91
CTTN-204ENST00000393747 COL16A1Q07092 1604 aaPredicted RBP26.98■■□□□ 1.91
CTTN-204ENST00000393747 PHLPP1O60346 1717 aa26.97■■□□□ 1.91
CTTN-204ENST00000393747 RPGRIP1LQ68CZ1 1315 aa26.96■■□□□ 1.91
CTTN-204ENST00000393747 VGFO15240 615 aaPredicted RBP26.96■■□□□ 1.91
CTTN-204ENST00000393747 MPHOSPH9Q99550 1183 aa26.95■■□□□ 1.91
CTTN-204ENST00000393747 JCADQ9P266 1359 aa26.95■■□□□ 1.9
CTTN-204ENST00000393747 BRINP3Q76B58 766 aa26.94■■□□□ 1.9
CTTN-204ENST00000393747 SETD1AO15047 1707 aaKnown RBP26.94■■□□□ 1.9
CTTN-204ENST00000393747 MST1RQ04912 1400 aa26.94■■□□□ 1.9
CTTN-204ENST00000393747 AHDC1Q5TGY3 1603 aaPredicted RBP26.94■■□□□ 1.9
CTTN-204ENST00000393747 ADGRL3Q9HAR2 1447 aa26.93■■□□□ 1.9
CTTN-204ENST00000393747 SPATA31E1Q6ZUB1 1445 aa26.92■■□□□ 1.9
CTTN-204ENST00000393747 CCDC144AA2RUR9 1427 aa26.91■■□□□ 1.9
CTTN-204ENST00000393747 PTCH1Q13635 1447 aa26.91■■□□□ 1.9
CTTN-204ENST00000393747 PRAG1Q86YV5 1406 aa26.91■■□□□ 1.9
CTTN-204ENST00000393747 ROBO2Q9HCK4 1378 aa26.9■■□□□ 1.9
CTTN-204ENST00000393747 PPLO60437 1756 aa26.89■■□□□ 1.89
CTTN-204ENST00000393747 ASXL1Q8IXJ9 1541 aa26.88■■□□□ 1.89
CTTN-204ENST00000393747 ADGRF5Q8IZF2 1346 aa26.87■■□□□ 1.89
CTTN-204ENST00000393747 SETD5Q9C0A6 1442 aa26.87■■□□□ 1.89
CTTN-204ENST00000393747 POTEAQ6S8J7 498 aa26.87■■□□□ 1.89
CTTN-204ENST00000393747 NALCNQ8IZF0 1738 aa26.86■■□□□ 1.89
CTTN-204ENST00000393747 LRP6O75581 1613 aa26.86■■□□□ 1.89
CTTN-204ENST00000393747 RGL3Q3MIN7 710 aa26.83■■□□□ 1.89
CTTN-204ENST00000393747 SPATA31A6Q5VVP1 1343 aa26.81■■□□□ 1.88
CTTN-204ENST00000393747 RAB3GAP2Q9H2M9 1393 aa26.8■■□□□ 1.88
CTTN-204ENST00000393747 C1orf167Q5SNV9 1468 aa26.79■■□□□ 1.88
CTTN-204ENST00000393747 ANKRD30BQ9BXX2 1392 aa26.79■■□□□ 1.88
CTTN-204ENST00000393747 DDX17Q92841 729 aaKnown RBP26.78■■□□□ 1.88
CTTN-204ENST00000393747 SHPRHQ149N8 1683 aa26.77■■□□□ 1.88
CTTN-204ENST00000393747 NHSL1Q5SYE7 1610 aa26.77■■□□□ 1.88
CTTN-204ENST00000393747 PIK3C2GO75747 1445 aa26.76■■□□□ 1.87
CTTN-204ENST00000393747 IFT172Q9UG01 1749 aa26.76■■□□□ 1.87
CTTN-204ENST00000393747 ACIN1Q9UKV3 1341 aaKnown RBP26.74■■□□□ 1.87
CTTN-204ENST00000393747 TECPR2O15040 1411 aa26.73■■□□□ 1.87
CTTN-204ENST00000393747 LRPPRCP42704 1394 aaKnown RBP26.71■■□□□ 1.87
CTTN-204ENST00000393747 ORAI2Q96SN7 254 aa26.7■■□□□ 1.87
CTTN-204ENST00000393747 TMEM132EQ6IEE7 984 aa26.69■■□□□ 1.86
CTTN-204ENST00000393747 NRXN1Q9ULB1 1477 aa26.68■■□□□ 1.86
CTTN-204ENST00000393747 PNPLA6Q8IY17 1366 aa26.68■■□□□ 1.86
CTTN-204ENST00000393747 ABCC11Q96J66 1382 aa26.68■■□□□ 1.86
CTTN-204ENST00000393747 LRRC59Q96AG4 307 aaKnown RBP26.67■■□□□ 1.86
CTTN-204ENST00000393747 STK26Q9P289 416 aa26.67■■□□□ 1.86
CTTN-204ENST00000393747 PLEKHH1Q9ULM0 1364 aa26.67■■□□□ 1.86
CTTN-204ENST00000393747 MEX3CQ5U5Q3 659 aaKnown RBP26.66■■□□□ 1.86
CTTN-204ENST00000393747 CDC42BPGQ6DT37 1551 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms