RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 NUP155O75694 1391 aa27.93■■■□□ 2.06
PDLIM7-205ENST00000393551 RRBP1Q9P2E9 1410 aaKnown RBP27.92■■■□□ 2.06
PDLIM7-205ENST00000393551 KCNA6P17658 529 aa27.89■■■□□ 2.06
PDLIM7-205ENST00000393551 RIMS2Q9UQ26 1411 aa27.89■■■□□ 2.06
PDLIM7-205ENST00000393551 SENP3Q9H4L4 574 aaPredicted RBP27.88■■■□□ 2.05
PDLIM7-205ENST00000393551 NWD1Q149M9 1564 aa27.86■■■□□ 2.05
PDLIM7-205ENST00000393551 TMEM94Q12767 1356 aa27.86■■■□□ 2.05
PDLIM7-205ENST00000393551 PLEKHG1Q9ULL1 1385 aa27.86■■■□□ 2.05
PDLIM7-205ENST00000393551 RBM33Q96EV2 1170 aaKnown RBP27.83■■■□□ 2.05
PDLIM7-205ENST00000393551 CHGAP10645 457 aaKnown RBP27.82■■■□□ 2.04
PDLIM7-205ENST00000393551 MED1Q15648 1581 aaPredicted RBP27.82■■■□□ 2.04
PDLIM7-205ENST00000393551 CHD2O14647 1828 aaKnown RBP27.81■■■□□ 2.04
PDLIM7-205ENST00000393551 NUTM2DQ5VT03 806 aaPredicted RBP27.8■■■□□ 2.04
PDLIM7-205ENST00000393551 BCANQ96GW7 911 aa27.8■■■□□ 2.04
PDLIM7-205ENST00000393551 NKTRP30414 1462 aaKnown RBP27.79■■■□□ 2.04
PDLIM7-205ENST00000393551 NAIPQ13075 1403 aa27.79■■■□□ 2.04
PDLIM7-205ENST00000393551 PROSER2Q86WR7 435 aaPredicted RBP27.79■■■□□ 2.04
PDLIM7-205ENST00000393551 SPHKAPQ2M3C7 1700 aa27.78■■■□□ 2.04
PDLIM7-205ENST00000393551 PPP1R15AO75807 674 aaPredicted RBP27.78■■■□□ 2.04
PDLIM7-205ENST00000393551 ADAMTS13Q76LX8 1427 aa27.77■■■□□ 2.04
PDLIM7-205ENST00000393551 HDGFP51858 240 aaKnown RBP27.77■■■□□ 2.04
PDLIM7-205ENST00000393551 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.75■■■□□ 2.03
PDLIM7-205ENST00000393551 SOCS7O14512 581 aa27.74■■■□□ 2.03
PDLIM7-205ENST00000393551 TBX22Q9Y458 520 aa27.74■■■□□ 2.03
PDLIM7-205ENST00000393551 FAM135BQ49AJ0 1406 aa27.72■■■□□ 2.03
PDLIM7-205ENST00000393551 DIP2AQ14689 1571 aa27.68■■■□□ 2.02
PDLIM7-205ENST00000393551 ROBO1Q9Y6N7 1651 aa27.68■■■□□ 2.02
PDLIM7-205ENST00000393551 CLTCL1P53675 1640 aa27.67■■■□□ 2.02
PDLIM7-205ENST00000393551 HFM1A2PYH4 1435 aa27.67■■■□□ 2.02
PDLIM7-205ENST00000393551 NRXN3Q9Y4C0 1643 aa27.66■■■□□ 2.02
PDLIM7-205ENST00000393551 TRPM2O94759 1503 aa27.64■■■□□ 2.02
PDLIM7-205ENST00000393551 MSH6P52701 1360 aa27.63■■■□□ 2.01
PDLIM7-205ENST00000393551 PTPRUQ92729 1446 aa27.63■■■□□ 2.01
PDLIM7-205ENST00000393551 PIK3R4Q99570 1358 aa27.62■■■□□ 2.01
PDLIM7-205ENST00000393551 SETBP1Q9Y6X0 1596 aa27.6■■■□□ 2.01
PDLIM7-205ENST00000393551 NCOA3Q9Y6Q9 1424 aa27.58■■■□□ 2.01
PDLIM7-205ENST00000393551 NEXMIFQ5QGS0 1516 aa27.58■■■□□ 2.01
PDLIM7-205ENST00000393551 SLAIN2Q9P270 581 aa27.58■■■□□ 2.01
PDLIM7-205ENST00000393551 ZNF326Q5BKZ1 582 aaKnown RBP27.57■■■□□ 2
PDLIM7-205ENST00000393551 KIF1BO60333 1816 aa27.57■■■□□ 2
PDLIM7-205ENST00000393551 TRIM52Q96A61 297 aa27.56■■■□□ 2
PDLIM7-205ENST00000393551 AMOTL2Q9Y2J4 779 aa27.56■■■□□ 2
PDLIM7-205ENST00000393551 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.55■■■□□ 2
PDLIM7-205ENST00000393551 XRN1Q8IZH2 1706 aaKnown RBP27.54■■■□□ 2
PDLIM7-205ENST00000393551 METP08581 1390 aa27.52■■■□□ 2
PDLIM7-205ENST00000393551 PHF23Q9BUL5 403 aaPredicted RBP27.51■■□□□ 1.99
PDLIM7-205ENST00000393551 SLC4A1APQ9BWU0 796 aaKnown RBP27.5■■□□□ 1.99
PDLIM7-205ENST00000393551 RGS17Q9UGC6 210 aaPredicted RBP27.5■■□□□ 1.99
PDLIM7-205ENST00000393551 C19orf44Q9H6X5 657 aa27.49■■□□□ 1.99
PDLIM7-205ENST00000393551 PHLPP1O60346 1717 aa27.49■■□□□ 1.99
PDLIM7-205ENST00000393551 C14orf37Q86TY3 774 aa27.48■■□□□ 1.99
PDLIM7-205ENST00000393551 FOXD1Q16676 465 aa27.44■■□□□ 1.98
PDLIM7-205ENST00000393551 CADPS2Q86UW7 1296 aa27.44■■□□□ 1.98
PDLIM7-205ENST00000393551 COL16A1Q07092 1604 aaPredicted RBP27.44■■□□□ 1.98
PDLIM7-205ENST00000393551 SETD1AO15047 1707 aaKnown RBP27.44■■□□□ 1.98
PDLIM7-205ENST00000393551 ATF3P18847 181 aa27.42■■□□□ 1.98
PDLIM7-205ENST00000393551 PPLO60437 1756 aa27.4■■□□□ 1.98
PDLIM7-205ENST00000393551 DCCP43146 1447 aa27.38■■□□□ 1.97
PDLIM7-205ENST00000393551 AHDC1Q5TGY3 1603 aaPredicted RBP27.38■■□□□ 1.97
PDLIM7-205ENST00000393551 JCADQ9P266 1359 aa27.36■■□□□ 1.97
PDLIM7-205ENST00000393551 VGFO15240 615 aaPredicted RBP27.36■■□□□ 1.97
PDLIM7-205ENST00000393551 RPGRIP1LQ68CZ1 1315 aa27.36■■□□□ 1.97
PDLIM7-205ENST00000393551 NALCNQ8IZF0 1738 aa27.36■■□□□ 1.97
PDLIM7-205ENST00000393551 BRINP3Q76B58 766 aa27.35■■□□□ 1.97
PDLIM7-205ENST00000393551 MST1RQ04912 1400 aa27.34■■□□□ 1.97
PDLIM7-205ENST00000393551 MPHOSPH9Q99550 1183 aa27.34■■□□□ 1.97
PDLIM7-205ENST00000393551 ADGRL3Q9HAR2 1447 aa27.33■■□□□ 1.96
PDLIM7-205ENST00000393551 POTEAQ6S8J7 498 aa27.31■■□□□ 1.96
PDLIM7-205ENST00000393551 SPATA31E1Q6ZUB1 1445 aa27.3■■□□□ 1.96
PDLIM7-205ENST00000393551 ASXL1Q8IXJ9 1541 aa27.3■■□□□ 1.96
PDLIM7-205ENST00000393551 ROBO2Q9HCK4 1378 aa27.29■■□□□ 1.96
PDLIM7-205ENST00000393551 CCDC144AA2RUR9 1427 aa27.28■■□□□ 1.96
PDLIM7-205ENST00000393551 PTCH1Q13635 1447 aa27.28■■□□□ 1.96
PDLIM7-205ENST00000393551 LRP6O75581 1613 aa27.27■■□□□ 1.96
PDLIM7-205ENST00000393551 PRAG1Q86YV5 1406 aa27.27■■□□□ 1.96
PDLIM7-205ENST00000393551 SHPRHQ149N8 1683 aa27.27■■□□□ 1.96
PDLIM7-205ENST00000393551 IFT172Q9UG01 1749 aa27.26■■□□□ 1.95
PDLIM7-205ENST00000393551 NHSL1Q5SYE7 1610 aa27.26■■□□□ 1.95
PDLIM7-205ENST00000393551 ADGRF5Q8IZF2 1346 aa27.25■■□□□ 1.95
PDLIM7-205ENST00000393551 RGL3Q3MIN7 710 aa27.24■■□□□ 1.95
PDLIM7-205ENST00000393551 SETD5Q9C0A6 1442 aa27.24■■□□□ 1.95
PDLIM7-205ENST00000393551 SPATA31A6Q5VVP1 1343 aa27.21■■□□□ 1.95
PDLIM7-205ENST00000393551 DDX17Q92841 729 aaKnown RBP27.2■■□□□ 1.94
PDLIM7-205ENST00000393551 C1orf167Q5SNV9 1468 aa27.19■■□□□ 1.94
PDLIM7-205ENST00000393551 ANKRD30BQ9BXX2 1392 aa27.16■■□□□ 1.94
PDLIM7-205ENST00000393551 RAB3GAP2Q9H2M9 1393 aa27.16■■□□□ 1.94
PDLIM7-205ENST00000393551 PIK3C2GO75747 1445 aa27.14■■□□□ 1.93
PDLIM7-205ENST00000393551 LAMC1P11047 1609 aa27.13■■□□□ 1.93
PDLIM7-205ENST00000393551 ORAI2Q96SN7 254 aa27.12■■□□□ 1.93
PDLIM7-205ENST00000393551 ACIN1Q9UKV3 1341 aaKnown RBP27.11■■□□□ 1.93
PDLIM7-205ENST00000393551 TECPR2O15040 1411 aa27.1■■□□□ 1.93
PDLIM7-205ENST00000393551 TMEM132EQ6IEE7 984 aa27.1■■□□□ 1.93
PDLIM7-205ENST00000393551 LRRC59Q96AG4 307 aaKnown RBP27.1■■□□□ 1.93
PDLIM7-205ENST00000393551 NUTM2BA6NNL0 878 aaPredicted RBP27.08■■□□□ 1.93
PDLIM7-205ENST00000393551 NUTM2EB1AL46 878 aaPredicted RBP27.08■■□□□ 1.93
PDLIM7-205ENST00000393551 MEX3CQ5U5Q3 659 aaKnown RBP27.08■■□□□ 1.93
PDLIM7-205ENST00000393551 NUTM2AQ8IVF1 878 aaPredicted RBP27.08■■□□□ 1.93
PDLIM7-205ENST00000393551 STK26Q9P289 416 aa27.08■■□□□ 1.93
PDLIM7-205ENST00000393551 LRPPRCP42704 1394 aaKnown RBP27.08■■□□□ 1.93
PDLIM7-205ENST00000393551 PNPLA6Q8IY17 1366 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms