RNA–Protein interactions for RNA: ENST00000393384.3

CRAT-202, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 2 BASIC

Gene CRAT, Length 973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-202ENST00000393384 SLC52A1Q9NWF4 448 aa29.04■■■□□ 2.24
CRAT-202ENST00000393384 E9PCH4 1651 aa29.04■■■□□ 2.24
CRAT-202ENST00000393384 TMEM94Q12767 1356 aa29.03■■■□□ 2.24
CRAT-202ENST00000393384 ADGRB3O60242 1522 aa29.02■■■□□ 2.24
CRAT-202ENST00000393384 MYO5BQ9ULV0 1848 aa29.01■■■□□ 2.23
CRAT-202ENST00000393384 SLC26A8Q96RN1 970 aa28.98■■■□□ 2.23
CRAT-202ENST00000393384 PROSER2Q86WR7 435 aaPredicted RBP28.96■■■□□ 2.23
CRAT-202ENST00000393384 RGS17Q9UGC6 210 aaPredicted RBP28.96■■■□□ 2.23
CRAT-202ENST00000393384 NUP155O75694 1391 aa28.96■■■□□ 2.23
CRAT-202ENST00000393384 NKTRP30414 1462 aaKnown RBP28.96■■■□□ 2.23
CRAT-202ENST00000393384 NWD1Q149M9 1564 aa28.93■■■□□ 2.22
CRAT-202ENST00000393384 TMEM131LA2VDJ0 1609 aa28.92■■■□□ 2.22
CRAT-202ENST00000393384 ROBO1Q9Y6N7 1651 aa28.92■■■□□ 2.22
CRAT-202ENST00000393384 BCANQ96GW7 911 aa28.9■■■□□ 2.22
CRAT-202ENST00000393384 MSH6P52701 1360 aa28.88■■■□□ 2.21
CRAT-202ENST00000393384 RBM33Q96EV2 1170 aaKnown RBP28.87■■■□□ 2.21
CRAT-202ENST00000393384 HDGFP51858 240 aaKnown RBP28.85■■■□□ 2.21
CRAT-202ENST00000393384 PLEKHG1Q9ULL1 1385 aa28.85■■■□□ 2.21
CRAT-202ENST00000393384 ZFYVE9O95405 1425 aa28.85■■■□□ 2.21
CRAT-202ENST00000393384 NAIPQ13075 1403 aa28.85■■■□□ 2.21
CRAT-202ENST00000393384 SPHKAPQ2M3C7 1700 aa28.84■■■□□ 2.21
CRAT-202ENST00000393384 PPP1R15AO75807 674 aaPredicted RBP28.82■■■□□ 2.2
CRAT-202ENST00000393384 RIMS2Q9UQ26 1411 aa28.81■■■□□ 2.2
CRAT-202ENST00000393384 SLAIN2Q9P270 581 aa28.8■■■□□ 2.2
CRAT-202ENST00000393384 CHD2O14647 1828 aaKnown RBP28.79■■■□□ 2.2
CRAT-202ENST00000393384 CHGAP10645 457 aaKnown RBP28.78■■■□□ 2.2
CRAT-202ENST00000393384 POTEAQ6S8J7 498 aa28.78■■■□□ 2.2
CRAT-202ENST00000393384 HFM1A2PYH4 1435 aa28.77■■■□□ 2.2
CRAT-202ENST00000393384 PHLPP1O60346 1717 aa28.75■■■□□ 2.19
CRAT-202ENST00000393384 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.75■■■□□ 2.19
CRAT-202ENST00000393384 TBX22Q9Y458 520 aa28.75■■■□□ 2.19
CRAT-202ENST00000393384 NCOA3Q9Y6Q9 1424 aa28.75■■■□□ 2.19
CRAT-202ENST00000393384 JCADQ9P266 1359 aa28.74■■■□□ 2.19
CRAT-202ENST00000393384 DIP2AQ14689 1571 aa28.68■■■□□ 2.18
CRAT-202ENST00000393384 KIF1BO60333 1816 aa28.67■■■□□ 2.18
CRAT-202ENST00000393384 ADAMTS13Q76LX8 1427 aa28.67■■■□□ 2.18
CRAT-202ENST00000393384 PIK3R4Q99570 1358 aa28.66■■■□□ 2.18
CRAT-202ENST00000393384 C14orf37Q86TY3 774 aa28.66■■■□□ 2.18
CRAT-202ENST00000393384 CLTCL1P53675 1640 aa28.65■■■□□ 2.18
CRAT-202ENST00000393384 COL16A1Q07092 1604 aaPredicted RBP28.65■■■□□ 2.18
CRAT-202ENST00000393384 TRPM2O94759 1503 aa28.65■■■□□ 2.18
CRAT-202ENST00000393384 TRIM52Q96A61 297 aa28.65■■■□□ 2.18
CRAT-202ENST00000393384 NUTM2DQ5VT03 806 aaPredicted RBP28.64■■■□□ 2.18
CRAT-202ENST00000393384 CADPS2Q86UW7 1296 aa28.63■■■□□ 2.17
CRAT-202ENST00000393384 C19orf44Q9H6X5 657 aa28.61■■■□□ 2.17
CRAT-202ENST00000393384 SPATA31A6Q5VVP1 1343 aa28.61■■■□□ 2.17
CRAT-202ENST00000393384 ATF3P18847 181 aa28.59■■■□□ 2.17
CRAT-202ENST00000393384 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.59■■■□□ 2.17
CRAT-202ENST00000393384 AHDC1Q5TGY3 1603 aaPredicted RBP28.58■■■□□ 2.17
CRAT-202ENST00000393384 ZNF326Q5BKZ1 582 aaKnown RBP28.56■■■□□ 2.16
CRAT-202ENST00000393384 SLC4A1APQ9BWU0 796 aaKnown RBP28.56■■■□□ 2.16
CRAT-202ENST00000393384 NRXN3Q9Y4C0 1643 aa28.54■■■□□ 2.16
CRAT-202ENST00000393384 AMOTL2Q9Y2J4 779 aa28.54■■■□□ 2.16
CRAT-202ENST00000393384 SETD1AO15047 1707 aaKnown RBP28.54■■■□□ 2.16
CRAT-202ENST00000393384 LRP6O75581 1613 aa28.54■■■□□ 2.16
CRAT-202ENST00000393384 MEX3CQ5U5Q3 659 aaKnown RBP28.53■■■□□ 2.16
CRAT-202ENST00000393384 SETBP1Q9Y6X0 1596 aa28.53■■■□□ 2.16
CRAT-202ENST00000393384 NEXMIFQ5QGS0 1516 aa28.53■■■□□ 2.16
CRAT-202ENST00000393384 SHPRHQ149N8 1683 aa28.51■■■□□ 2.16
CRAT-202ENST00000393384 ZNF772Q68DY9 489 aaPredicted RBP28.51■■■□□ 2.15
CRAT-202ENST00000393384 DCCP43146 1447 aa28.5■■■□□ 2.15
CRAT-202ENST00000393384 PTPRUQ92729 1446 aa28.5■■■□□ 2.15
CRAT-202ENST00000393384 BRINP3Q76B58 766 aa28.47■■■□□ 2.15
CRAT-202ENST00000393384 XRN1Q8IZH2 1706 aaKnown RBP28.44■■■□□ 2.14
CRAT-202ENST00000393384 ACIN1Q9UKV3 1341 aaKnown RBP28.43■■■□□ 2.14
CRAT-202ENST00000393384 PPLO60437 1756 aa28.42■■■□□ 2.14
CRAT-202ENST00000393384 MPHOSPH9Q99550 1183 aa28.41■■■□□ 2.14
CRAT-202ENST00000393384 ASXL1Q8IXJ9 1541 aa28.4■■■□□ 2.14
CRAT-202ENST00000393384 RPGRIP1LQ68CZ1 1315 aa28.4■■■□□ 2.14
CRAT-202ENST00000393384 FOXD1Q16676 465 aa28.39■■■□□ 2.14
CRAT-202ENST00000393384 SETD5Q9C0A6 1442 aa28.39■■■□□ 2.14
CRAT-202ENST00000393384 MST1RQ04912 1400 aa28.38■■■□□ 2.13
CRAT-202ENST00000393384 VGFO15240 615 aaPredicted RBP28.38■■■□□ 2.13
CRAT-202ENST00000393384 METP08581 1390 aa28.37■■■□□ 2.13
CRAT-202ENST00000393384 NUTM2BA6NNL0 878 aaPredicted RBP28.35■■■□□ 2.13
CRAT-202ENST00000393384 NUTM2EB1AL46 878 aaPredicted RBP28.35■■■□□ 2.13
CRAT-202ENST00000393384 RXRBP28702 533 aa28.35■■■□□ 2.13
CRAT-202ENST00000393384 NUTM2AQ8IVF1 878 aaPredicted RBP28.35■■■□□ 2.13
CRAT-202ENST00000393384 NHSL1Q5SYE7 1610 aa28.34■■■□□ 2.13
CRAT-202ENST00000393384 UPF1Q92900 1129 aaKnown RBP eCLIP28.34■■■□□ 2.13
CRAT-202ENST00000393384 CCDC144AA2RUR9 1427 aa28.34■■■□□ 2.13
CRAT-202ENST00000393384 ADGRL3Q9HAR2 1447 aa28.33■■■□□ 2.13
CRAT-202ENST00000393384 LRRC59Q96AG4 307 aaKnown RBP28.32■■■□□ 2.12
CRAT-202ENST00000393384 CDK12Q9NYV4 1490 aaPredicted RBP28.32■■■□□ 2.12
CRAT-202ENST00000393384 IFT172Q9UG01 1749 aa28.29■■■□□ 2.12
CRAT-202ENST00000393384 AFF2P51816 1311 aa28.29■■■□□ 2.12
CRAT-202ENST00000393384 RAB3GAP2Q9H2M9 1393 aa28.26■■■□□ 2.12
CRAT-202ENST00000393384 SPATA31E1Q6ZUB1 1445 aa28.26■■■□□ 2.11
CRAT-202ENST00000393384 NALCNQ8IZF0 1738 aa28.24■■■□□ 2.11
CRAT-202ENST00000393384 PNPLA6Q8IY17 1366 aa28.24■■■□□ 2.11
CRAT-202ENST00000393384 RGL3Q3MIN7 710 aa28.21■■■□□ 2.11
CRAT-202ENST00000393384 PTCH1Q13635 1447 aa28.2■■■□□ 2.11
CRAT-202ENST00000393384 DDX17Q92841 729 aaKnown RBP28.2■■■□□ 2.1
CRAT-202ENST00000393384 C8orf37Q96NL8 207 aa28.2■■■□□ 2.1
CRAT-202ENST00000393384 C1orf167Q5SNV9 1468 aa28.2■■■□□ 2.1
CRAT-202ENST00000393384 ANKRD30BQ9BXX2 1392 aa28.19■■■□□ 2.1
CRAT-202ENST00000393384 PRAG1Q86YV5 1406 aa28.18■■■□□ 2.1
CRAT-202ENST00000393384 ADGRF5Q8IZF2 1346 aa28.18■■■□□ 2.1
CRAT-202ENST00000393384 RBM6P78332 1123 aaKnown RBP28.17■■■□□ 2.1
CRAT-202ENST00000393384 LAMC1P11047 1609 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms