RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 ITGAEP38570 1179 aa40.43■■■■■ 4.06
NPHP3-202ENST00000383282 PROSER2Q86WR7 435 aaPredicted RBP40.43■■■■■ 4.06
NPHP3-202ENST00000383282 XIRP1Q702N8 1843 aaKnown RBP40.42■■■■■ 4.06
NPHP3-202ENST00000383282 PHF23Q9BUL5 403 aaPredicted RBP40.41■■■■■ 4.06
NPHP3-202ENST00000383282 ZFYVE9O95405 1425 aa40.41■■■■■ 4.06
NPHP3-202ENST00000383282 CHGAP10645 457 aaKnown RBP40.4■■■■■ 4.06
NPHP3-202ENST00000383282 RIMS2Q9UQ26 1411 aa40.4■■■■■ 4.06
NPHP3-202ENST00000383282 PLEKHG1Q9ULL1 1385 aa40.39■■■■■ 4.06
NPHP3-202ENST00000383282 NKTRP30414 1462 aaKnown RBP40.38■■■■■ 4.05
NPHP3-202ENST00000383282 PPARGC1BQ86YN6 1023 aaKnown RBP40.37■■■■■ 4.05
NPHP3-202ENST00000383282 NUP155O75694 1391 aa40.35■■■■■ 4.05
NPHP3-202ENST00000383282 TMEM131LA2VDJ0 1609 aa40.35■■■■■ 4.05
NPHP3-202ENST00000383282 ABCF1Q8NE71 845 aaKnown RBP eCLIP40.35■■■■■ 4.05
NPHP3-202ENST00000383282 IQGAP3Q86VI3 1631 aa40.34■■■■■ 4.05
NPHP3-202ENST00000383282 NWD1Q149M9 1564 aa40.34■■■■■ 4.05
NPHP3-202ENST00000383282 FAM135BQ49AJ0 1406 aa40.33■■■■■ 4.05
NPHP3-202ENST00000383282 E9PCH4 1651 aa40.33■■■■■ 4.05
NPHP3-202ENST00000383282 RBM33Q96EV2 1170 aaKnown RBP40.31■■■■■ 4.04
NPHP3-202ENST00000383282 MYO5BQ9ULV0 1848 aa40.3■■■■■ 4.04
NPHP3-202ENST00000383282 MSH6P52701 1360 aa40.26■■■■■ 4.04
NPHP3-202ENST00000383282 TBX22Q9Y458 520 aa40.25■■■■■ 4.03
NPHP3-202ENST00000383282 NUTM2DQ5VT03 806 aaPredicted RBP40.2■■■■■ 4.03
NPHP3-202ENST00000383282 CHD2O14647 1828 aaKnown RBP40.16■■■■■ 4.02
NPHP3-202ENST00000383282 ROBO1Q9Y6N7 1651 aa40.15■■■■■ 4.02
NPHP3-202ENST00000383282 ADAMTS13Q76LX8 1427 aa40.13■■■■■ 4.01
NPHP3-202ENST00000383282 DIP2AQ14689 1571 aa40.13■■■■■ 4.01
NPHP3-202ENST00000383282 PIK3R4Q99570 1358 aa40.11■■■■■ 4.01
NPHP3-202ENST00000383282 NCOA3Q9Y6Q9 1424 aa40.11■■■■■ 4.01
NPHP3-202ENST00000383282 SLAIN2Q9P270 581 aa40.11■■■■■ 4.01
NPHP3-202ENST00000383282 C14orf37Q86TY3 774 aa40.09■■■■■ 4.01
NPHP3-202ENST00000383282 RRBP1Q9P2E9 1410 aaKnown RBP40.08■■■■■ 4.01
NPHP3-202ENST00000383282 TRPM2O94759 1503 aa40.02■■■■■ 4
NPHP3-202ENST00000383282 SPHKAPQ2M3C7 1700 aa40.02■■■■■ 4
NPHP3-202ENST00000383282 ZNF326Q5BKZ1 582 aaKnown RBP40.01■■■■■ 4
NPHP3-202ENST00000383282 AMOTL2Q9Y2J4 779 aa39.98■■■■□ 3.99
NPHP3-202ENST00000383282 CADPS2Q86UW7 1296 aa39.97■■■■□ 3.99
NPHP3-202ENST00000383282 C19orf44Q9H6X5 657 aa39.96■■■■□ 3.99
NPHP3-202ENST00000383282 NAIPQ13075 1403 aa39.95■■■■□ 3.99
NPHP3-202ENST00000383282 RGS17Q9UGC6 210 aaPredicted RBP39.95■■■■□ 3.99
NPHP3-202ENST00000383282 ATF3P18847 181 aa39.94■■■■□ 3.98
NPHP3-202ENST00000383282 PHLPP1O60346 1717 aa39.91■■■■□ 3.98
NPHP3-202ENST00000383282 JCADQ9P266 1359 aa39.9■■■■□ 3.98
NPHP3-202ENST00000383282 PTPRUQ92729 1446 aa39.9■■■■□ 3.98
NPHP3-202ENST00000383282 SETBP1Q9Y6X0 1596 aa39.89■■■■□ 3.98
NPHP3-202ENST00000383282 SIPA1L2Q9P2F8 1722 aaPredicted RBP39.85■■■■□ 3.97
NPHP3-202ENST00000383282 TRIM52Q96A61 297 aa39.85■■■■□ 3.97
NPHP3-202ENST00000383282 CLTCL1P53675 1640 aa39.83■■■■□ 3.97
NPHP3-202ENST00000383282 NRXN3Q9Y4C0 1643 aa39.83■■■■□ 3.97
NPHP3-202ENST00000383282 HFM1A2PYH4 1435 aa39.82■■■■□ 3.96
NPHP3-202ENST00000383282 DCCP43146 1447 aa39.78■■■■□ 3.96
NPHP3-202ENST00000383282 COL16A1Q07092 1604 aaPredicted RBP39.78■■■■□ 3.96
NPHP3-202ENST00000383282 NEXMIFQ5QGS0 1516 aa39.77■■■■□ 3.96
NPHP3-202ENST00000383282 METP08581 1390 aa39.77■■■■□ 3.96
NPHP3-202ENST00000383282 XRN1Q8IZH2 1706 aaKnown RBP39.77■■■■□ 3.96
NPHP3-202ENST00000383282 POTEAQ6S8J7 498 aa39.75■■■■□ 3.95
NPHP3-202ENST00000383282 AHDC1Q5TGY3 1603 aaPredicted RBP39.73■■■■□ 3.95
NPHP3-202ENST00000383282 SLC4A1APQ9BWU0 796 aaKnown RBP39.73■■■■□ 3.95
NPHP3-202ENST00000383282 KIF1BO60333 1816 aa39.72■■■■□ 3.95
NPHP3-202ENST00000383282 SPATA31A6Q5VVP1 1343 aa39.71■■■■□ 3.95
NPHP3-202ENST00000383282 BRINP3Q76B58 766 aa39.7■■■■□ 3.95
NPHP3-202ENST00000383282 VGFO15240 615 aaPredicted RBP39.69■■■■□ 3.94
NPHP3-202ENST00000383282 MEX3CQ5U5Q3 659 aaKnown RBP39.64■■■■□ 3.94
NPHP3-202ENST00000383282 RPGRIP1LQ68CZ1 1315 aa39.64■■■■□ 3.94
NPHP3-202ENST00000383282 MST1RQ04912 1400 aa39.62■■■■□ 3.93
NPHP3-202ENST00000383282 ADGRL3Q9HAR2 1447 aa39.62■■■■□ 3.93
NPHP3-202ENST00000383282 ASXL1Q8IXJ9 1541 aa39.59■■■■□ 3.93
NPHP3-202ENST00000383282 LRP6O75581 1613 aa39.57■■■■□ 3.92
NPHP3-202ENST00000383282 SHPRHQ149N8 1683 aa39.56■■■■□ 3.92
NPHP3-202ENST00000383282 PTCH1Q13635 1447 aa39.53■■■■□ 3.92
NPHP3-202ENST00000383282 ZNF772Q68DY9 489 aaPredicted RBP39.52■■■■□ 3.92
NPHP3-202ENST00000383282 SETD5Q9C0A6 1442 aa39.49■■■■□ 3.91
NPHP3-202ENST00000383282 FOXD1Q16676 465 aa39.48■■■■□ 3.91
NPHP3-202ENST00000383282 LRRC59Q96AG4 307 aaKnown RBP39.48■■■■□ 3.91
NPHP3-202ENST00000383282 NALCNQ8IZF0 1738 aa39.48■■■■□ 3.91
NPHP3-202ENST00000383282 NUTM2BA6NNL0 878 aaPredicted RBP39.46■■■■□ 3.91
NPHP3-202ENST00000383282 NUTM2EB1AL46 878 aaPredicted RBP39.46■■■■□ 3.91
NPHP3-202ENST00000383282 NUTM2AQ8IVF1 878 aaPredicted RBP39.46■■■■□ 3.91
NPHP3-202ENST00000383282 NHSL1Q5SYE7 1610 aa39.45■■■■□ 3.91
NPHP3-202ENST00000383282 CCDC144AA2RUR9 1427 aa39.45■■■■□ 3.91
NPHP3-202ENST00000383282 ROBO2Q9HCK4 1378 aa39.45■■■■□ 3.91
NPHP3-202ENST00000383282 SETD1AO15047 1707 aaKnown RBP39.44■■■■□ 3.9
NPHP3-202ENST00000383282 PPLO60437 1756 aa39.42■■■■□ 3.9
NPHP3-202ENST00000383282 PRAG1Q86YV5 1406 aa39.41■■■■□ 3.9
NPHP3-202ENST00000383282 C1orf167Q5SNV9 1468 aa39.41■■■■□ 3.9
NPHP3-202ENST00000383282 MPHOSPH9Q99550 1183 aa39.39■■■■□ 3.9
NPHP3-202ENST00000383282 DDX17Q92841 729 aaKnown RBP39.38■■■■□ 3.89
NPHP3-202ENST00000383282 RGL3Q3MIN7 710 aa39.36■■■■□ 3.89
NPHP3-202ENST00000383282 ACIN1Q9UKV3 1341 aaKnown RBP39.33■■■■□ 3.89
NPHP3-202ENST00000383282 ADGRF5Q8IZF2 1346 aa39.32■■■■□ 3.88
NPHP3-202ENST00000383282 PNPLA6Q8IY17 1366 aa39.32■■■■□ 3.88
NPHP3-202ENST00000383282 ANKRD30BQ9BXX2 1392 aa39.32■■■■□ 3.88
NPHP3-202ENST00000383282 ORAI2Q96SN7 254 aa39.29■■■■□ 3.88
NPHP3-202ENST00000383282 SPATA31E1Q6ZUB1 1445 aa39.29■■■■□ 3.88
NPHP3-202ENST00000383282 RXRBP28702 533 aa39.28■■■■□ 3.88
NPHP3-202ENST00000383282 AFF2P51816 1311 aa39.28■■■■□ 3.88
NPHP3-202ENST00000383282 SOS2Q07890 1332 aaPredicted RBP39.23■■■■□ 3.87
NPHP3-202ENST00000383282 C8orf37Q96NL8 207 aa39.23■■■■□ 3.87
NPHP3-202ENST00000383282 LAMC1P11047 1609 aa39.22■■■■□ 3.87
NPHP3-202ENST00000383282 STK26Q9P289 416 aa39.21■■■■□ 3.87
NPHP3-202ENST00000383282 LRPPRCP42704 1394 aaKnown RBP39.18■■■■□ 3.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms