RNA–Protein interactions for RNA: ENST00000380142.4

CDKN2B-202, Transcript of cyclin dependent kinase inhibitor 2B, humanhuman

TSL 1 (best) BASIC

Gene CDKN2B, Length 859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2B-202ENST00000380142 NKTRP30414 1462 aaKnown RBP35.62■■■■□ 3.29
CDKN2B-202ENST00000380142 PROSER2Q86WR7 435 aaPredicted RBP35.62■■■■□ 3.29
CDKN2B-202ENST00000380142 ZFYVE9O95405 1425 aa35.62■■■■□ 3.29
CDKN2B-202ENST00000380142 ANKRD50Q9ULJ7 1429 aa35.61■■■■□ 3.29
CDKN2B-202ENST00000380142 SLC52A1Q9NWF4 448 aa35.61■■■■□ 3.29
CDKN2B-202ENST00000380142 RPRD2Q5VT52 1461 aaKnown RBP35.6■■■■□ 3.29
CDKN2B-202ENST00000380142 TMEM131LA2VDJ0 1609 aa35.6■■■■□ 3.29
CDKN2B-202ENST00000380142 FAM50AQ14320 339 aaKnown RBP35.55■■■■□ 3.28
CDKN2B-202ENST00000380142 UNC13BO14795 1591 aa35.54■■■■□ 3.28
CDKN2B-202ENST00000380142 PLEKHG1Q9ULL1 1385 aa35.52■■■■□ 3.28
CDKN2B-202ENST00000380142 RIMS2Q9UQ26 1411 aa35.51■■■■□ 3.28
CDKN2B-202ENST00000380142 E9PCH4 1651 aa35.51■■■■□ 3.28
CDKN2B-202ENST00000380142 POTEAQ6S8J7 498 aa35.5■■■■□ 3.27
CDKN2B-202ENST00000380142 PHLPP1O60346 1717 aa35.49■■■■□ 3.27
CDKN2B-202ENST00000380142 BCANQ96GW7 911 aa35.47■■■■□ 3.27
CDKN2B-202ENST00000380142 MSH6P52701 1360 aa35.46■■■■□ 3.27
CDKN2B-202ENST00000380142 SLAIN2Q9P270 581 aa35.42■■■■□ 3.26
CDKN2B-202ENST00000380142 ADAMTS13Q76LX8 1427 aa35.4■■■■□ 3.26
CDKN2B-202ENST00000380142 COL16A1Q07092 1604 aaPredicted RBP35.39■■■■□ 3.26
CDKN2B-202ENST00000380142 IQGAP3Q86VI3 1631 aa35.39■■■■□ 3.26
CDKN2B-202ENST00000380142 TBX22Q9Y458 520 aa35.37■■■■□ 3.25
CDKN2B-202ENST00000380142 PPP1R15AO75807 674 aaPredicted RBP35.36■■■■□ 3.25
CDKN2B-202ENST00000380142 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.35■■■■□ 3.25
CDKN2B-202ENST00000380142 NUTM2DQ5VT03 806 aaPredicted RBP35.35■■■■□ 3.25
CDKN2B-202ENST00000380142 SETD1AO15047 1707 aaKnown RBP35.33■■■■□ 3.25
CDKN2B-202ENST00000380142 CHGAP10645 457 aaKnown RBP35.32■■■■□ 3.24
CDKN2B-202ENST00000380142 DIP2AQ14689 1571 aa35.31■■■■□ 3.24
CDKN2B-202ENST00000380142 HDGFP51858 240 aaKnown RBP35.31■■■■□ 3.24
CDKN2B-202ENST00000380142 NCOA3Q9Y6Q9 1424 aa35.31■■■■□ 3.24
CDKN2B-202ENST00000380142 ROCK1Q13464 1354 aa35.3■■■■□ 3.24
CDKN2B-202ENST00000380142 JCADQ9P266 1359 aa35.3■■■■□ 3.24
CDKN2B-202ENST00000380142 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.28■■■■□ 3.24
CDKN2B-202ENST00000380142 LRP6O75581 1613 aa35.25■■■■□ 3.23
CDKN2B-202ENST00000380142 PTPRUQ92729 1446 aa35.25■■■■□ 3.23
CDKN2B-202ENST00000380142 NRXN3Q9Y4C0 1643 aa35.24■■■■□ 3.23
CDKN2B-202ENST00000380142 AHDC1Q5TGY3 1603 aaPredicted RBP35.23■■■■□ 3.23
CDKN2B-202ENST00000380142 PIK3R4Q99570 1358 aa35.23■■■■□ 3.23
CDKN2B-202ENST00000380142 TRPM2O94759 1503 aa35.2■■■■□ 3.23
CDKN2B-202ENST00000380142 NUP155O75694 1391 aa35.19■■■■□ 3.22
CDKN2B-202ENST00000380142 SHPRHQ149N8 1683 aa35.18■■■■□ 3.22
CDKN2B-202ENST00000380142 C14orf37Q86TY3 774 aa35.17■■■■□ 3.22
CDKN2B-202ENST00000380142 SPHKAPQ2M3C7 1700 aa35.17■■■■□ 3.22
CDKN2B-202ENST00000380142 XRN1Q8IZH2 1706 aaKnown RBP35.17■■■■□ 3.22
CDKN2B-202ENST00000380142 C19orf44Q9H6X5 657 aa35.16■■■■□ 3.22
CDKN2B-202ENST00000380142 CADPS2Q86UW7 1296 aa35.14■■■■□ 3.22
CDKN2B-202ENST00000380142 AMOTL2Q9Y2J4 779 aa35.14■■■■□ 3.22
CDKN2B-202ENST00000380142 SETBP1Q9Y6X0 1596 aa35.11■■■■□ 3.21
CDKN2B-202ENST00000380142 SPATA31A6Q5VVP1 1343 aa35.09■■■■□ 3.21
CDKN2B-202ENST00000380142 ATF3P18847 181 aa35.09■■■■□ 3.21
CDKN2B-202ENST00000380142 ITGAEP38570 1179 aa35.09■■■■□ 3.21
CDKN2B-202ENST00000380142 BRINP3Q76B58 766 aa35.07■■■■□ 3.2
CDKN2B-202ENST00000380142 NHSL1Q5SYE7 1610 aa35.03■■■■□ 3.2
CDKN2B-202ENST00000380142 ASXL1Q8IXJ9 1541 aa35.02■■■■□ 3.2
CDKN2B-202ENST00000380142 DCCP43146 1447 aa35.02■■■■□ 3.2
CDKN2B-202ENST00000380142 METP08581 1390 aa35.01■■■■□ 3.2
CDKN2B-202ENST00000380142 PPARGC1BQ86YN6 1023 aaKnown RBP35.01■■■■□ 3.2
CDKN2B-202ENST00000380142 CLTCL1P53675 1640 aa35.01■■■■□ 3.19
CDKN2B-202ENST00000380142 MST1RQ04912 1400 aa35■■■■□ 3.19
CDKN2B-202ENST00000380142 NEXMIFQ5QGS0 1516 aa34.98■■■■□ 3.19
CDKN2B-202ENST00000380142 MEX3CQ5U5Q3 659 aaKnown RBP34.97■■■■□ 3.19
CDKN2B-202ENST00000380142 NALCNQ8IZF0 1738 aa34.97■■■■□ 3.19
CDKN2B-202ENST00000380142 ZNF772Q68DY9 489 aaPredicted RBP34.94■■■■□ 3.18
CDKN2B-202ENST00000380142 SETD5Q9C0A6 1442 aa34.93■■■■□ 3.18
CDKN2B-202ENST00000380142 KIF1BO60333 1816 aa34.91■■■■□ 3.18
CDKN2B-202ENST00000380142 ZNF326Q5BKZ1 582 aaKnown RBP34.91■■■■□ 3.18
CDKN2B-202ENST00000380142 TRIM52Q96A61 297 aa34.91■■■■□ 3.18
CDKN2B-202ENST00000380142 NUTM2BA6NNL0 878 aaPredicted RBP34.89■■■■□ 3.18
CDKN2B-202ENST00000380142 NUTM2EB1AL46 878 aaPredicted RBP34.89■■■■□ 3.18
CDKN2B-202ENST00000380142 NUTM2AQ8IVF1 878 aaPredicted RBP34.89■■■■□ 3.18
CDKN2B-202ENST00000380142 ADGRL3Q9HAR2 1447 aa34.89■■■■□ 3.18
CDKN2B-202ENST00000380142 UPF1Q92900 1129 aaKnown RBP eCLIP34.88■■■■□ 3.17
CDKN2B-202ENST00000380142 DDX17Q92841 729 aaKnown RBP34.86■■■■□ 3.17
CDKN2B-202ENST00000380142 AFF2P51816 1311 aa34.81■■■■□ 3.16
CDKN2B-202ENST00000380142 NAIPQ13075 1403 aa34.81■■■■□ 3.16
CDKN2B-202ENST00000380142 PNPLA6Q8IY17 1366 aa34.8■■■■□ 3.16
CDKN2B-202ENST00000380142 RXRBP28702 533 aa34.8■■■■□ 3.16
CDKN2B-202ENST00000380142 CDK12Q9NYV4 1490 aaPredicted RBP34.78■■■■□ 3.16
CDKN2B-202ENST00000380142 LAMC1P11047 1609 aa34.77■■■■□ 3.16
CDKN2B-202ENST00000380142 RRBP1Q9P2E9 1410 aaKnown RBP34.77■■■■□ 3.16
CDKN2B-202ENST00000380142 LRRC59Q96AG4 307 aaKnown RBP34.76■■■■□ 3.16
CDKN2B-202ENST00000380142 C1orf167Q5SNV9 1468 aa34.75■■■■□ 3.15
CDKN2B-202ENST00000380142 ROBO2Q9HCK4 1378 aa34.72■■■■□ 3.15
CDKN2B-202ENST00000380142 PTCH1Q13635 1447 aa34.72■■■■□ 3.15
CDKN2B-202ENST00000380142 PPLO60437 1756 aa34.71■■■■□ 3.15
CDKN2B-202ENST00000380142 RGS12O14924 1447 aa34.68■■■■□ 3.14
CDKN2B-202ENST00000380142 C8orf37Q96NL8 207 aa34.68■■■■□ 3.14
CDKN2B-202ENST00000380142 PRAG1Q86YV5 1406 aa34.67■■■■□ 3.14
CDKN2B-202ENST00000380142 ORAI2Q96SN7 254 aa34.65■■■■□ 3.14
CDKN2B-202ENST00000380142 SOS2Q07890 1332 aaPredicted RBP34.62■■■■□ 3.13
CDKN2B-202ENST00000380142 QTRT2Q9H974 415 aaKnown RBP34.62■■■■□ 3.13
CDKN2B-202ENST00000380142 VGFO15240 615 aaPredicted RBP34.61■■■■□ 3.13
CDKN2B-202ENST00000380142 HFM1A2PYH4 1435 aa34.58■■■■□ 3.13
CDKN2B-202ENST00000380142 ADAMTS2O95450 1211 aa34.58■■■■□ 3.13
CDKN2B-202ENST00000380142 RBM6P78332 1123 aaKnown RBP34.58■■■■□ 3.13
CDKN2B-202ENST00000380142 COL22A1Q8NFW1 1626 aaPredicted RBP34.56■■■■□ 3.12
CDKN2B-202ENST00000380142 RPGRIP1LQ68CZ1 1315 aa34.55■■■■□ 3.12
CDKN2B-202ENST00000380142 NGLY1Q96IV0 654 aa34.52■■■■□ 3.12
CDKN2B-202ENST00000380142 SLC4A1APQ9BWU0 796 aaKnown RBP34.51■■■■□ 3.12
CDKN2B-202ENST00000380142 CDC42BPGQ6DT37 1551 aa34.5■■■■□ 3.11
CDKN2B-202ENST00000380142 IFT172Q9UG01 1749 aa34.48■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms