RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 WASHC2AQ641Q2 1341 aa24.54■■□□□ 1.52
PCDH8-202ENST00000377942 CENPQQ7L2Z9 268 aaPredicted RBP24.54■■□□□ 1.52
PCDH8-202ENST00000377942 RRP1P56182 461 aaKnown RBP24.53■■□□□ 1.52
PCDH8-202ENST00000377942 API5Q9BZZ5 524 aaKnown RBP24.53■■□□□ 1.52
PCDH8-202ENST00000377942 NEXNQ0ZGT2 675 aa24.53■■□□□ 1.52
PCDH8-202ENST00000377942 POGZQ7Z3K3 1410 aa24.52■■□□□ 1.52
PCDH8-202ENST00000377942 GNL2Q13823 731 aaKnown RBP24.52■■□□□ 1.52
PCDH8-202ENST00000377942 GBP4Q96PP9 640 aa24.51■■□□□ 1.51
PCDH8-202ENST00000377942 GNAI1P63096 354 aa24.51■■□□□ 1.51
PCDH8-202ENST00000377942 CDK13Q14004 1512 aaKnown RBP24.51■■□□□ 1.51
PCDH8-202ENST00000377942 GGNBP2Q9H3C7 697 aa24.51■■□□□ 1.51
PCDH8-202ENST00000377942 BRD4O60885 1362 aaPredicted RBP24.5■■□□□ 1.51
PCDH8-202ENST00000377942 PLCB2Q00722 1185 aa24.5■■□□□ 1.51
PCDH8-202ENST00000377942 RAPGEF3O95398 923 aa24.5■■□□□ 1.51
PCDH8-202ENST00000377942 HTATSF1O43719 755 aaKnown RBP24.49■■□□□ 1.51
PCDH8-202ENST00000377942 MFAP1P55081 439 aaKnown RBP24.49■■□□□ 1.51
PCDH8-202ENST00000377942 ISY1Q9ULR0 285 aaKnown RBP24.49■■□□□ 1.51
PCDH8-202ENST00000377942 GPRASP1Q5JY77 1395 aa24.49■■□□□ 1.51
PCDH8-202ENST00000377942 BCL2L13Q9BXK5 485 aa24.49■■□□□ 1.51
PCDH8-202ENST00000377942 DDX19BQ9UMR2 479 aa24.48■■□□□ 1.51
PCDH8-202ENST00000377942 ANKRD30BQ9BXX2 1392 aa24.48■■□□□ 1.51
PCDH8-202ENST00000377942 RAPGEF4Q8WZA2 1011 aa24.48■■□□□ 1.51
PCDH8-202ENST00000377942 URB2Q14146 1524 aaKnown RBP24.47■■□□□ 1.51
PCDH8-202ENST00000377942 CCDC141Q6ZP82 1450 aa24.47■■□□□ 1.51
PCDH8-202ENST00000377942 NLRP6P59044 892 aa24.47■■□□□ 1.51
PCDH8-202ENST00000377942 SPRYD3Q8NCJ5 442 aa24.46■■□□□ 1.51
PCDH8-202ENST00000377942 DDX58O95786 925 aaKnown RBP24.46■■□□□ 1.51
PCDH8-202ENST00000377942 DNTTIP2Q5QJE6 756 aaKnown RBP24.45■■□□□ 1.5
PCDH8-202ENST00000377942 MAP3K1Q13233 1512 aa24.45■■□□□ 1.5
PCDH8-202ENST00000377942 GLIPR1L2Q4G1C9 344 aa24.44■■□□□ 1.5
PCDH8-202ENST00000377942 PRAM1Q96QH2 718 aa24.44■■□□□ 1.5
PCDH8-202ENST00000377942 NBPF1Q3BBV0 1214 aa24.43■■□□□ 1.5
PCDH8-202ENST00000377942 KIF16BQ96L93 1317 aa24.42■■□□□ 1.5
PCDH8-202ENST00000377942 G3V3G9 751 aa24.42■■□□□ 1.5
PCDH8-202ENST00000377942 DCAF8Q5TAQ9 597 aa24.42■■□□□ 1.5
PCDH8-202ENST00000377942 EIF2S2P20042 333 aaKnown RBP24.42■■□□□ 1.5
PCDH8-202ENST00000377942 L1TD1Q5T7N2 865 aaKnown RBP24.42■■□□□ 1.5
PCDH8-202ENST00000377942 PROSER2Q86WR7 435 aaPredicted RBP24.42■■□□□ 1.5
PCDH8-202ENST00000377942 DZIP1LQ8IYY4 767 aaKnown RBP24.42■■□□□ 1.5
PCDH8-202ENST00000377942 CD109Q6YHK3 1445 aa24.42■■□□□ 1.5
PCDH8-202ENST00000377942 ZNF692Q9BU19 519 aaPredicted RBP24.41■■□□□ 1.5
PCDH8-202ENST00000377942 COG6Q9Y2V7 657 aa24.41■■□□□ 1.5
PCDH8-202ENST00000377942 ARHGEF11O15085 1522 aa24.41■■□□□ 1.5
PCDH8-202ENST00000377942 C9orf78Q9NZ63 289 aaPredicted RBP24.41■■□□□ 1.5
PCDH8-202ENST00000377942 PCF11O94913 1555 aaKnown RBP24.41■■□□□ 1.5
PCDH8-202ENST00000377942 MTHFSP49914 203 aa24.4■■□□□ 1.5
PCDH8-202ENST00000377942 AAMPQ13685 434 aa24.4■■□□□ 1.5
PCDH8-202ENST00000377942 PLB1Q6P1J6 1458 aa24.4■■□□□ 1.5
PCDH8-202ENST00000377942 ANKRD45Q5TZF3 282 aa24.39■■□□□ 1.5
PCDH8-202ENST00000377942 FRAT2O75474 233 aaPredicted RBP24.39■■□□□ 1.5
PCDH8-202ENST00000377942 CRBNQ96SW2 442 aa24.39■■□□□ 1.5
PCDH8-202ENST00000377942 NAIPQ13075 1403 aa24.39■■□□□ 1.5
PCDH8-202ENST00000377942 PLIN1O60240 522 aa24.39■■□□□ 1.49
PCDH8-202ENST00000377942 TULP1O00294 542 aaPredicted RBP24.39■■□□□ 1.49
PCDH8-202ENST00000377942 TSPYL4Q9UJ04 414 aa24.38■■□□□ 1.49
PCDH8-202ENST00000377942 EXOC6Q8TAG9 804 aa24.38■■□□□ 1.49
PCDH8-202ENST00000377942 LRRFIP1Q32MZ4 808 aaKnown RBP24.38■■□□□ 1.49
PCDH8-202ENST00000377942 ERBINQ96RT1 1412 aa24.37■■□□□ 1.49
PCDH8-202ENST00000377942 ST18O60284 1047 aa24.37■■□□□ 1.49
PCDH8-202ENST00000377942 HMOX1P09601 288 aa24.37■■□□□ 1.49
PCDH8-202ENST00000377942 NLRP2Q9NX02 1062 aa24.37■■□□□ 1.49
PCDH8-202ENST00000377942 NBPF8Q3BBV2 869 aa24.36■■□□□ 1.49
PCDH8-202ENST00000377942 AEBP2Q6ZN18 517 aaPredicted RBP24.36■■□□□ 1.49
PCDH8-202ENST00000377942 ANKLE2Q86XL3 938 aa24.36■■□□□ 1.49
PCDH8-202ENST00000377942 BIVM-ERCC5R4GMW8 1640 aa24.36■■□□□ 1.49
PCDH8-202ENST00000377942 KIF14Q15058 1648 aa24.36■■□□□ 1.49
PCDH8-202ENST00000377942 ABTB2Q8N961 1025 aa24.35■■□□□ 1.49
PCDH8-202ENST00000377942 KIF3AQ9Y496 699 aa24.35■■□□□ 1.49
PCDH8-202ENST00000377942 CHMP4CQ96CF2 233 aa24.35■■□□□ 1.49
PCDH8-202ENST00000377942 PPP2R1AP30153 589 aa24.35■■□□□ 1.49
PCDH8-202ENST00000377942 FKBP5Q13451 457 aaPredicted RBP24.34■■□□□ 1.49
PCDH8-202ENST00000377942 GAS2L2Q8NHY3 880 aa24.34■■□□□ 1.49
PCDH8-202ENST00000377942 CAMSAP2Q08AD1 1489 aa24.34■■□□□ 1.49
PCDH8-202ENST00000377942 HSP90B1P14625 803 aaKnown RBP24.34■■□□□ 1.49
PCDH8-202ENST00000377942 ESCO1Q5FWF5 840 aa24.34■■□□□ 1.49
PCDH8-202ENST00000377942 SYAP1Q96A49 352 aaPredicted RBP24.34■■□□□ 1.49
PCDH8-202ENST00000377942 SLKQ9H2G2 1235 aaPredicted RBP24.33■■□□□ 1.49
PCDH8-202ENST00000377942 FAM161AQ3B820 660 aa24.33■■□□□ 1.49
PCDH8-202ENST00000377942 CDK19Q9BWU1 502 aa24.33■■□□□ 1.49
PCDH8-202ENST00000377942 CCDC34Q96HJ3 373 aa24.32■■□□□ 1.48
PCDH8-202ENST00000377942 ADAMTS8Q9UP79 889 aa24.31■■□□□ 1.48
PCDH8-202ENST00000377942 MEX3CQ5U5Q3 659 aaKnown RBP24.31■■□□□ 1.48
PCDH8-202ENST00000377942 IPO9Q96P70 1041 aaKnown RBP24.31■■□□□ 1.48
PCDH8-202ENST00000377942 CSPP1Q1MSJ5 1256 aa24.31■■□□□ 1.48
PCDH8-202ENST00000377942 ATAD2Q6PL18 1390 aa24.3■■□□□ 1.48
PCDH8-202ENST00000377942 ADGRL1O94910 1474 aa24.3■■□□□ 1.48
PCDH8-202ENST00000377942 NUTM2GQ5VZR2 741 aa24.3■■□□□ 1.48
PCDH8-202ENST00000377942 UNC13AQ9UPW8 1703 aa24.3■■□□□ 1.48
PCDH8-202ENST00000377942 ZNF608Q9ULD9 1512 aaPredicted RBP24.3■■□□□ 1.48
PCDH8-202ENST00000377942 RILPL2Q969X0 211 aa24.29■■□□□ 1.48
PCDH8-202ENST00000377942 SLC12A5Q9H2X9 1139 aa24.29■■□□□ 1.48
PCDH8-202ENST00000377942 HSP90AB4PQ58FF6 505 aa24.29■■□□□ 1.48
PCDH8-202ENST00000377942 RTEL1-TNFRSF6BF6WH68 1400 aa24.29■■□□□ 1.48
PCDH8-202ENST00000377942 TCP11L2Q8N4U5 519 aa24.29■■□□□ 1.48
PCDH8-202ENST00000377942 RUFY2Q8WXA3 655 aa24.29■■□□□ 1.48
PCDH8-202ENST00000377942 SYTL4Q96C24 671 aaPredicted RBP24.29■■□□□ 1.48
PCDH8-202ENST00000377942 ABCC5O15440 1437 aa24.28■■□□□ 1.48
PCDH8-202ENST00000377942 PLEKHO1Q53GL0 409 aaPredicted RBP24.27■■□□□ 1.48
PCDH8-202ENST00000377942 PTPN23Q9H3S7 1636 aa24.27■■□□□ 1.48
PCDH8-202ENST00000377942 CABP1Q9NZU7 370 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms