RNA–Protein interactions for RNA: ENST00000376497.7

CLCN6-207, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 3 BASIC

Gene CLCN6, Length 814 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-207ENST00000376497 PROSER2Q86WR7 435 aaPredicted RBP23.69■■□□□ 1.38
CLCN6-207ENST00000376497 NKTRP30414 1462 aaKnown RBP23.68■■□□□ 1.38
CLCN6-207ENST00000376497 ZFYVE9O95405 1425 aa23.67■■□□□ 1.38
CLCN6-207ENST00000376497 UNC13BO14795 1591 aa23.67■■□□□ 1.38
CLCN6-207ENST00000376497 TMEM131LA2VDJ0 1609 aa23.66■■□□□ 1.38
CLCN6-207ENST00000376497 CHD2O14647 1828 aaKnown RBP23.66■■□□□ 1.38
CLCN6-207ENST00000376497 ROBO1Q9Y6N7 1651 aa23.65■■□□□ 1.38
CLCN6-207ENST00000376497 PLEKHG1Q9ULL1 1385 aa23.65■■□□□ 1.38
CLCN6-207ENST00000376497 HDGFP51858 240 aaKnown RBP23.64■■□□□ 1.37
CLCN6-207ENST00000376497 RBM33Q96EV2 1170 aaKnown RBP23.63■■□□□ 1.37
CLCN6-207ENST00000376497 BCANQ96GW7 911 aa23.63■■□□□ 1.37
CLCN6-207ENST00000376497 RIMS2Q9UQ26 1411 aa23.62■■□□□ 1.37
CLCN6-207ENST00000376497 RGS17Q9UGC6 210 aaPredicted RBP23.62■■□□□ 1.37
CLCN6-207ENST00000376497 E9PCH4 1651 aa23.62■■□□□ 1.37
CLCN6-207ENST00000376497 ROCK1Q13464 1354 aa23.61■■□□□ 1.37
CLCN6-207ENST00000376497 MSH6P52701 1360 aa23.59■■□□□ 1.37
CLCN6-207ENST00000376497 IQGAP3Q86VI3 1631 aa23.59■■□□□ 1.37
CLCN6-207ENST00000376497 TBX22Q9Y458 520 aa23.58■■□□□ 1.37
CLCN6-207ENST00000376497 PPP1R15AO75807 674 aaPredicted RBP23.57■■□□□ 1.36
CLCN6-207ENST00000376497 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.57■■□□□ 1.36
CLCN6-207ENST00000376497 NCOA3Q9Y6Q9 1424 aa23.54■■□□□ 1.36
CLCN6-207ENST00000376497 SLAIN2Q9P270 581 aa23.54■■□□□ 1.36
CLCN6-207ENST00000376497 CHGAP10645 457 aaKnown RBP23.53■■□□□ 1.36
CLCN6-207ENST00000376497 PHLPP1O60346 1717 aa23.53■■□□□ 1.36
CLCN6-207ENST00000376497 ADAMTS13Q76LX8 1427 aa23.52■■□□□ 1.36
CLCN6-207ENST00000376497 DIP2AQ14689 1571 aa23.52■■□□□ 1.36
CLCN6-207ENST00000376497 PIK3R4Q99570 1358 aa23.5■■□□□ 1.35
CLCN6-207ENST00000376497 NUP155O75694 1391 aa23.49■■□□□ 1.35
CLCN6-207ENST00000376497 NUTM2DQ5VT03 806 aaPredicted RBP23.47■■□□□ 1.35
CLCN6-207ENST00000376497 PPARGC1BQ86YN6 1023 aaKnown RBP23.47■■□□□ 1.35
CLCN6-207ENST00000376497 POTEAQ6S8J7 498 aa23.46■■□□□ 1.35
CLCN6-207ENST00000376497 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.46■■□□□ 1.35
CLCN6-207ENST00000376497 JCADQ9P266 1359 aa23.45■■□□□ 1.34
CLCN6-207ENST00000376497 COL16A1Q07092 1604 aaPredicted RBP23.44■■□□□ 1.34
CLCN6-207ENST00000376497 ITGAEP38570 1179 aa23.43■■□□□ 1.34
CLCN6-207ENST00000376497 TRPM2O94759 1503 aa23.43■■□□□ 1.34
CLCN6-207ENST00000376497 SPHKAPQ2M3C7 1700 aa23.42■■□□□ 1.34
CLCN6-207ENST00000376497 C19orf44Q9H6X5 657 aa23.42■■□□□ 1.34
CLCN6-207ENST00000376497 CADPS2Q86UW7 1296 aa23.41■■□□□ 1.34
CLCN6-207ENST00000376497 C14orf37Q86TY3 774 aa23.4■■□□□ 1.34
CLCN6-207ENST00000376497 PTPRUQ92729 1446 aa23.4■■□□□ 1.34
CLCN6-207ENST00000376497 AMOTL2Q9Y2J4 779 aa23.39■■□□□ 1.33
CLCN6-207ENST00000376497 NRXN3Q9Y4C0 1643 aa23.38■■□□□ 1.33
CLCN6-207ENST00000376497 AHDC1Q5TGY3 1603 aaPredicted RBP23.37■■□□□ 1.33
CLCN6-207ENST00000376497 ATF3P18847 181 aa23.37■■□□□ 1.33
CLCN6-207ENST00000376497 SETBP1Q9Y6X0 1596 aa23.36■■□□□ 1.33
CLCN6-207ENST00000376497 XRN1Q8IZH2 1706 aaKnown RBP23.35■■□□□ 1.33
CLCN6-207ENST00000376497 SPATA31A6Q5VVP1 1343 aa23.33■■□□□ 1.33
CLCN6-207ENST00000376497 SHPRHQ149N8 1683 aa23.33■■□□□ 1.33
CLCN6-207ENST00000376497 DCCP43146 1447 aa23.32■■□□□ 1.32
CLCN6-207ENST00000376497 LRP6O75581 1613 aa23.3■■□□□ 1.32
CLCN6-207ENST00000376497 ZNF326Q5BKZ1 582 aaKnown RBP23.3■■□□□ 1.32
CLCN6-207ENST00000376497 BRINP3Q76B58 766 aa23.29■■□□□ 1.32
CLCN6-207ENST00000376497 CLTCL1P53675 1640 aa23.29■■□□□ 1.32
CLCN6-207ENST00000376497 KIF1BO60333 1816 aa23.28■■□□□ 1.32
CLCN6-207ENST00000376497 RRBP1Q9P2E9 1410 aaKnown RBP23.27■■□□□ 1.32
CLCN6-207ENST00000376497 SETD1AO15047 1707 aaKnown RBP23.27■■□□□ 1.32
CLCN6-207ENST00000376497 NEXMIFQ5QGS0 1516 aa23.27■■□□□ 1.32
CLCN6-207ENST00000376497 METP08581 1390 aa23.27■■□□□ 1.31
CLCN6-207ENST00000376497 MST1RQ04912 1400 aa23.25■■□□□ 1.31
CLCN6-207ENST00000376497 NAIPQ13075 1403 aa23.24■■□□□ 1.31
CLCN6-207ENST00000376497 ASXL1Q8IXJ9 1541 aa23.23■■□□□ 1.31
CLCN6-207ENST00000376497 NHSL1Q5SYE7 1610 aa23.23■■□□□ 1.31
CLCN6-207ENST00000376497 MEX3CQ5U5Q3 659 aaKnown RBP23.23■■□□□ 1.31
CLCN6-207ENST00000376497 ZNF772Q68DY9 489 aaPredicted RBP23.23■■□□□ 1.31
CLCN6-207ENST00000376497 SETD5Q9C0A6 1442 aa23.21■■□□□ 1.31
CLCN6-207ENST00000376497 ADGRL3Q9HAR2 1447 aa23.2■■□□□ 1.3
CLCN6-207ENST00000376497 NALCNQ8IZF0 1738 aa23.19■■□□□ 1.3
CLCN6-207ENST00000376497 LRRC59Q96AG4 307 aaKnown RBP23.15■■□□□ 1.3
CLCN6-207ENST00000376497 NUTM2BA6NNL0 878 aaPredicted RBP23.14■■□□□ 1.29
CLCN6-207ENST00000376497 NUTM2EB1AL46 878 aaPredicted RBP23.14■■□□□ 1.29
CLCN6-207ENST00000376497 VGFO15240 615 aaPredicted RBP23.14■■□□□ 1.29
CLCN6-207ENST00000376497 NUTM2AQ8IVF1 878 aaPredicted RBP23.14■■□□□ 1.29
CLCN6-207ENST00000376497 HFM1A2PYH4 1435 aa23.13■■□□□ 1.29
CLCN6-207ENST00000376497 PTCH1Q13635 1447 aa23.12■■□□□ 1.29
CLCN6-207ENST00000376497 RPGRIP1LQ68CZ1 1315 aa23.11■■□□□ 1.29
CLCN6-207ENST00000376497 RXRBP28702 533 aa23.11■■□□□ 1.29
CLCN6-207ENST00000376497 TRIM52Q96A61 297 aa23.11■■□□□ 1.29
CLCN6-207ENST00000376497 PPLO60437 1756 aa23.1■■□□□ 1.29
CLCN6-207ENST00000376497 LAMC1P11047 1609 aa23.1■■□□□ 1.29
CLCN6-207ENST00000376497 C1orf167Q5SNV9 1468 aa23.1■■□□□ 1.29
CLCN6-207ENST00000376497 PRAG1Q86YV5 1406 aa23.09■■□□□ 1.29
CLCN6-207ENST00000376497 DDX17Q92841 729 aaKnown RBP23.09■■□□□ 1.29
CLCN6-207ENST00000376497 CDK12Q9NYV4 1490 aaPredicted RBP23.09■■□□□ 1.29
CLCN6-207ENST00000376497 AFF2P51816 1311 aa23.08■■□□□ 1.29
CLCN6-207ENST00000376497 UPF1Q92900 1129 aaKnown RBP eCLIP23.08■■□□□ 1.29
CLCN6-207ENST00000376497 PNPLA6Q8IY17 1366 aa23.08■■□□□ 1.29
CLCN6-207ENST00000376497 ROBO2Q9HCK4 1378 aa23.07■■□□□ 1.28
CLCN6-207ENST00000376497 SLC4A1APQ9BWU0 796 aaKnown RBP23.07■■□□□ 1.28
CLCN6-207ENST00000376497 C8orf37Q96NL8 207 aa23.02■■□□□ 1.28
CLCN6-207ENST00000376497 SOS2Q07890 1332 aaPredicted RBP23.02■■□□□ 1.28
CLCN6-207ENST00000376497 ORAI2Q96SN7 254 aa23.01■■□□□ 1.27
CLCN6-207ENST00000376497 QTRT2Q9H974 415 aaKnown RBP22.99■■□□□ 1.27
CLCN6-207ENST00000376497 RBM6P78332 1123 aaKnown RBP22.97■■□□□ 1.27
CLCN6-207ENST00000376497 FOXD1Q16676 465 aa22.95■■□□□ 1.26
CLCN6-207ENST00000376497 IFT172Q9UG01 1749 aa22.95■■□□□ 1.26
CLCN6-207ENST00000376497 COL22A1Q8NFW1 1626 aaPredicted RBP22.94■■□□□ 1.26
CLCN6-207ENST00000376497 CDC42BPGQ6DT37 1551 aa22.94■■□□□ 1.26
CLCN6-207ENST00000376497 RGS12O14924 1447 aa22.94■■□□□ 1.26
CLCN6-207ENST00000376497 ADAMTS2O95450 1211 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms