RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 FGD1P98174 961 aa22.7■■□□□ 1.23
PTPDC1-202ENST00000375360 NCOA1Q15788 1441 aa22.7■■□□□ 1.22
PTPDC1-202ENST00000375360 NECTIN2Q92692 538 aa22.69■■□□□ 1.22
PTPDC1-202ENST00000375360 ANP32EQ9BTT0 268 aa22.69■■□□□ 1.22
PTPDC1-202ENST00000375360 ANKRD30BQ9BXX2 1392 aa22.69■■□□□ 1.22
PTPDC1-202ENST00000375360 CCDC141Q6ZP82 1450 aa22.69■■□□□ 1.22
PTPDC1-202ENST00000375360 NLRP6P59044 892 aa22.68■■□□□ 1.22
PTPDC1-202ENST00000375360 PPP2R1AP30153 589 aa22.68■■□□□ 1.22
PTPDC1-202ENST00000375360 NAP1L2Q9ULW6 460 aaPredicted RBP22.67■■□□□ 1.22
PTPDC1-202ENST00000375360 CABP1Q9NZU7 370 aa22.67■■□□□ 1.22
PTPDC1-202ENST00000375360 RUNDC1Q96C34 613 aa22.66■■□□□ 1.22
PTPDC1-202ENST00000375360 PTPN23Q9H3S7 1636 aa22.65■■□□□ 1.22
PTPDC1-202ENST00000375360 TEFQ10587 303 aa22.65■■□□□ 1.22
PTPDC1-202ENST00000375360 CHMP3Q9Y3E7 222 aa22.65■■□□□ 1.22
PTPDC1-202ENST00000375360 ERBINQ96RT1 1412 aa22.64■■□□□ 1.21
PTPDC1-202ENST00000375360 FBXO31Q5XUX0 539 aaPredicted RBP22.63■■□□□ 1.21
PTPDC1-202ENST00000375360 MAP3K1Q13233 1512 aa22.63■■□□□ 1.21
PTPDC1-202ENST00000375360 THOC2Q8NI27 1593 aaKnown RBP22.63■■□□□ 1.21
PTPDC1-202ENST00000375360 EIF2S2P20042 333 aaKnown RBP22.63■■□□□ 1.21
PTPDC1-202ENST00000375360 ZKSCAN2Q63HK3 967 aa22.63■■□□□ 1.21
PTPDC1-202ENST00000375360 TCP11L2Q8N4U5 519 aa22.63■■□□□ 1.21
PTPDC1-202ENST00000375360 CDK19Q9BWU1 502 aa22.62■■□□□ 1.21
PTPDC1-202ENST00000375360 MFAP1P55081 439 aaKnown RBP22.62■■□□□ 1.21
PTPDC1-202ENST00000375360 EIF5BO60841 1220 aaKnown RBP22.61■■□□□ 1.21
PTPDC1-202ENST00000375360 HSCBQ8IWL3 235 aa22.61■■□□□ 1.21
PTPDC1-202ENST00000375360 NGEFQ8N5V2 710 aa22.61■■□□□ 1.21
PTPDC1-202ENST00000375360 PTPRKQ15262 1439 aa22.61■■□□□ 1.21
PTPDC1-202ENST00000375360 AKNAQ7Z591 1439 aa22.6■■□□□ 1.21
PTPDC1-202ENST00000375360 SLKQ9H2G2 1235 aaPredicted RBP22.6■■□□□ 1.21
PTPDC1-202ENST00000375360 C1orf141Q5JVX7 400 aa22.6■■□□□ 1.21
PTPDC1-202ENST00000375360 EVA1CP58658 441 aa22.59■■□□□ 1.21
PTPDC1-202ENST00000375360 ADGRL1O94910 1474 aa22.59■■□□□ 1.21
PTPDC1-202ENST00000375360 BRD4O60885 1362 aaPredicted RBP22.58■■□□□ 1.21
PTPDC1-202ENST00000375360 THEMISQ8N1K5 641 aaPredicted RBP22.58■■□□□ 1.21
PTPDC1-202ENST00000375360 IDI1Q13907 227 aa22.58■■□□□ 1.2
PTPDC1-202ENST00000375360 ATF3P18847 181 aa22.57■■□□□ 1.2
PTPDC1-202ENST00000375360 PNISRQ8TF01 805 aaKnown RBP22.57■■□□□ 1.2
PTPDC1-202ENST00000375360 CHMP4AQ9BY43 222 aa22.57■■□□□ 1.2
PTPDC1-202ENST00000375360 ATP10BO94823 1461 aa22.57■■□□□ 1.2
PTPDC1-202ENST00000375360 ESCO1Q5FWF5 840 aa22.57■■□□□ 1.2
PTPDC1-202ENST00000375360 ABTB2Q8N961 1025 aa22.57■■□□□ 1.2
PTPDC1-202ENST00000375360 GPATCH8Q9UKJ3 1502 aaKnown RBP22.56■■□□□ 1.2
PTPDC1-202ENST00000375360 TRIM6-TRIM34B2RNG4 842 aa22.56■■□□□ 1.2
PTPDC1-202ENST00000375360 HMMRO75330 724 aa22.56■■□□□ 1.2
PTPDC1-202ENST00000375360 CEBPAP49715 358 aaPredicted RBP22.56■■□□□ 1.2
PTPDC1-202ENST00000375360 WAPLQ7Z5K2 1190 aa22.56■■□□□ 1.2
PTPDC1-202ENST00000375360 ADGRF5Q8IZF2 1346 aa22.55■■□□□ 1.2
PTPDC1-202ENST00000375360 PROSER2Q86WR7 435 aaPredicted RBP22.54■■□□□ 1.2
PTPDC1-202ENST00000375360 ANKRD45Q5TZF3 282 aa22.54■■□□□ 1.2
PTPDC1-202ENST00000375360 PRKAR2BP31323 418 aa22.53■■□□□ 1.2
PTPDC1-202ENST00000375360 PANK1Q8TE04 598 aa22.53■■□□□ 1.2
PTPDC1-202ENST00000375360 KIAA1211Q6ZU35 1233 aa22.52■■□□□ 1.2
PTPDC1-202ENST00000375360 KIF14Q15058 1648 aa22.51■■□□□ 1.19
PTPDC1-202ENST00000375360 NLRP2Q9NX02 1062 aa22.51■■□□□ 1.19
PTPDC1-202ENST00000375360 NUP153P49790 1475 aaKnown RBP22.51■■□□□ 1.19
PTPDC1-202ENST00000375360 DZIP1LQ8IYY4 767 aaKnown RBP22.51■■□□□ 1.19
PTPDC1-202ENST00000375360 MCCP23508 829 aa22.5■■□□□ 1.19
PTPDC1-202ENST00000375360 CENPQQ7L2Z9 268 aaPredicted RBP22.5■■□□□ 1.19
PTPDC1-202ENST00000375360 FANCAO15360 1455 aa22.48■■□□□ 1.19
PTPDC1-202ENST00000375360 TAF7LQ5H9L4 462 aa22.48■■□□□ 1.19
PTPDC1-202ENST00000375360 TSPYL4Q9UJ04 414 aa22.48■■□□□ 1.19
PTPDC1-202ENST00000375360 GORABQ5T7V8 394 aa22.48■■□□□ 1.19
PTPDC1-202ENST00000375360 RPGRIP1LQ68CZ1 1315 aa22.47■■□□□ 1.19
PTPDC1-202ENST00000375360 PDE4AP27815 886 aa22.47■■□□□ 1.19
PTPDC1-202ENST00000375360 RBM33Q96EV2 1170 aaKnown RBP22.47■■□□□ 1.19
PTPDC1-202ENST00000375360 FKBP5Q13451 457 aaPredicted RBP22.47■■□□□ 1.19
PTPDC1-202ENST00000375360 SYTL4Q96C24 671 aaPredicted RBP22.47■■□□□ 1.19
PTPDC1-202ENST00000375360 USP35Q9P2H5 1018 aa22.47■■□□□ 1.19
PTPDC1-202ENST00000375360 GNAI1P63096 354 aa22.45■■□□□ 1.19
PTPDC1-202ENST00000375360 TSR2Q969E8 191 aaKnown RBP22.45■■□□□ 1.18
PTPDC1-202ENST00000375360 RRS1Q15050 365 aaKnown RBP22.45■■□□□ 1.18
PTPDC1-202ENST00000375360 PLCB2Q00722 1185 aa22.45■■□□□ 1.18
PTPDC1-202ENST00000375360 RAPGEF4Q8WZA2 1011 aa22.45■■□□□ 1.18
PTPDC1-202ENST00000375360 SLC4A3P48751 1232 aa22.44■■□□□ 1.18
PTPDC1-202ENST00000375360 TRIM44Q96DX7 344 aaPredicted RBP22.44■■□□□ 1.18
PTPDC1-202ENST00000375360 SULT6B1Q6IMI4 303 aa22.44■■□□□ 1.18
PTPDC1-202ENST00000375360 TTC5Q8N0Z6 440 aa22.44■■□□□ 1.18
PTPDC1-202ENST00000375360 XPCQ01831 940 aaPredicted RBP22.43■■□□□ 1.18
PTPDC1-202ENST00000375360 NOL8Q76FK4 1167 aaKnown RBP22.43■■□□□ 1.18
PTPDC1-202ENST00000375360 ANKLE2Q86XL3 938 aa22.43■■□□□ 1.18
PTPDC1-202ENST00000375360 FOXD4L1Q9NU39 408 aa22.43■■□□□ 1.18
PTPDC1-202ENST00000375360 EXOSC9Q06265 439 aaKnown RBP22.42■■□□□ 1.18
PTPDC1-202ENST00000375360 DDX19BQ9UMR2 479 aa22.42■■□□□ 1.18
PTPDC1-202ENST00000375360 RTEL1-TNFRSF6BF6WH68 1400 aa22.42■■□□□ 1.18
PTPDC1-202ENST00000375360 HDAC5Q9UQL6 1122 aa22.42■■□□□ 1.18
PTPDC1-202ENST00000375360 GTF2E1P29083 439 aaPredicted RBP22.41■■□□□ 1.18
PTPDC1-202ENST00000375360 ZRSR1Q15695 479 aaKnown RBP22.4■■□□□ 1.18
PTPDC1-202ENST00000375360 CCDC61Q9Y6R9 512 aa22.4■■□□□ 1.18
PTPDC1-202ENST00000375360 IPO9Q96P70 1041 aaKnown RBP22.4■■□□□ 1.18
PTPDC1-202ENST00000375360 BCAR3O75815 825 aa22.39■■□□□ 1.18
PTPDC1-202ENST00000375360 C9orf78Q9NZ63 289 aaPredicted RBP22.39■■□□□ 1.18
PTPDC1-202ENST00000375360 RILPL2Q969X0 211 aa22.39■■□□□ 1.18
PTPDC1-202ENST00000375360 NUDT16Q96DE0 195 aaKnown RBP22.39■■□□□ 1.17
PTPDC1-202ENST00000375360 API5Q9BZZ5 524 aaKnown RBP22.39■■□□□ 1.17
PTPDC1-202ENST00000375360 CFAP44Q96MT7 982 aa22.38■■□□□ 1.17
PTPDC1-202ENST00000375360 RPRD2Q5VT52 1461 aaKnown RBP22.38■■□□□ 1.17
PTPDC1-202ENST00000375360 GPRASP1Q5JY77 1395 aa22.38■■□□□ 1.17
PTPDC1-202ENST00000375360 ZNF692Q9BU19 519 aaPredicted RBP22.37■■□□□ 1.17
PTPDC1-202ENST00000375360 DHX29Q7Z478 1369 aaKnown RBP22.37■■□□□ 1.17
PTPDC1-202ENST00000375360 LNPKQ9C0E8 428 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms