RNA–Protein interactions for RNA: ENST00000373891.2

CHPF-202, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 1,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-202ENST00000373891 ANKRD50Q9ULJ7 1429 aa31.42■■■□□ 2.62
CHPF-202ENST00000373891 RGS17Q9UGC6 210 aaPredicted RBP31.42■■■□□ 2.62
CHPF-202ENST00000373891 NWD1Q149M9 1564 aa31.42■■■□□ 2.62
CHPF-202ENST00000373891 SLC52A1Q9NWF4 448 aa31.4■■■□□ 2.62
CHPF-202ENST00000373891 NKTRP30414 1462 aaKnown RBP31.37■■■□□ 2.61
CHPF-202ENST00000373891 RPRD2Q5VT52 1461 aaKnown RBP31.37■■■□□ 2.61
CHPF-202ENST00000373891 CHD2O14647 1828 aaKnown RBP31.36■■■□□ 2.61
CHPF-202ENST00000373891 TMEM131LA2VDJ0 1609 aa31.35■■■□□ 2.61
CHPF-202ENST00000373891 ZFYVE9O95405 1425 aa31.34■■■□□ 2.61
CHPF-202ENST00000373891 PPP1R15AO75807 674 aaPredicted RBP31.34■■■□□ 2.61
CHPF-202ENST00000373891 RIMS2Q9UQ26 1411 aa31.33■■■□□ 2.61
CHPF-202ENST00000373891 CHGAP10645 457 aaKnown RBP31.32■■■□□ 2.6
CHPF-202ENST00000373891 MSH6P52701 1360 aa31.31■■■□□ 2.6
CHPF-202ENST00000373891 UNC13BO14795 1591 aa31.31■■■□□ 2.6
CHPF-202ENST00000373891 PHLPP1O60346 1717 aa31.31■■■□□ 2.6
CHPF-202ENST00000373891 E9PCH4 1651 aa31.31■■■□□ 2.6
CHPF-202ENST00000373891 PLEKHG1Q9ULL1 1385 aa31.3■■■□□ 2.6
CHPF-202ENST00000373891 NUTM2DQ5VT03 806 aaPredicted RBP31.28■■■□□ 2.6
CHPF-202ENST00000373891 POTEAQ6S8J7 498 aa31.26■■■□□ 2.59
CHPF-202ENST00000373891 SLAIN2Q9P270 581 aa31.24■■■□□ 2.59
CHPF-202ENST00000373891 HDGFP51858 240 aaKnown RBP31.21■■■□□ 2.59
CHPF-202ENST00000373891 IQGAP3Q86VI3 1631 aa31.2■■■□□ 2.58
CHPF-202ENST00000373891 C14orf37Q86TY3 774 aa31.18■■■□□ 2.58
CHPF-202ENST00000373891 ITGAEP38570 1179 aa31.16■■■□□ 2.58
CHPF-202ENST00000373891 TBX22Q9Y458 520 aa31.16■■■□□ 2.58
CHPF-202ENST00000373891 ADAMTS13Q76LX8 1427 aa31.15■■■□□ 2.58
CHPF-202ENST00000373891 SETD1AO15047 1707 aaKnown RBP31.15■■■□□ 2.58
CHPF-202ENST00000373891 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.15■■■□□ 2.58
CHPF-202ENST00000373891 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.15■■■□□ 2.58
CHPF-202ENST00000373891 COL16A1Q07092 1604 aaPredicted RBP31.14■■■□□ 2.58
CHPF-202ENST00000373891 JCADQ9P266 1359 aa31.12■■■□□ 2.57
CHPF-202ENST00000373891 ROCK1Q13464 1354 aa31.11■■■□□ 2.57
CHPF-202ENST00000373891 DIP2AQ14689 1571 aa31.11■■■□□ 2.57
CHPF-202ENST00000373891 NUP155O75694 1391 aa31.1■■■□□ 2.57
CHPF-202ENST00000373891 PPARGC1BQ86YN6 1023 aaKnown RBP31.08■■■□□ 2.57
CHPF-202ENST00000373891 TRPM2O94759 1503 aa31.05■■■□□ 2.56
CHPF-202ENST00000373891 NCOA3Q9Y6Q9 1424 aa31.05■■■□□ 2.56
CHPF-202ENST00000373891 SPHKAPQ2M3C7 1700 aa31.04■■■□□ 2.56
CHPF-202ENST00000373891 LRP6O75581 1613 aa31.03■■■□□ 2.56
CHPF-202ENST00000373891 PTPRUQ92729 1446 aa31.03■■■□□ 2.56
CHPF-202ENST00000373891 ATF3P18847 181 aa31.02■■■□□ 2.56
CHPF-202ENST00000373891 AMOTL2Q9Y2J4 779 aa31.02■■■□□ 2.56
CHPF-202ENST00000373891 PIK3R4Q99570 1358 aa31.02■■■□□ 2.56
CHPF-202ENST00000373891 CADPS2Q86UW7 1296 aa31.01■■■□□ 2.55
CHPF-202ENST00000373891 C19orf44Q9H6X5 657 aa31.01■■■□□ 2.55
CHPF-202ENST00000373891 AHDC1Q5TGY3 1603 aaPredicted RBP31■■■□□ 2.55
CHPF-202ENST00000373891 NRXN3Q9Y4C0 1643 aa31■■■□□ 2.55
CHPF-202ENST00000373891 MEX3CQ5U5Q3 659 aaKnown RBP30.98■■■□□ 2.55
CHPF-202ENST00000373891 SHPRHQ149N8 1683 aa30.97■■■□□ 2.55
CHPF-202ENST00000373891 XRN1Q8IZH2 1706 aaKnown RBP30.95■■■□□ 2.54
CHPF-202ENST00000373891 ZNF326Q5BKZ1 582 aaKnown RBP30.94■■■□□ 2.54
CHPF-202ENST00000373891 SPATA31A6Q5VVP1 1343 aa30.94■■■□□ 2.54
CHPF-202ENST00000373891 BRINP3Q76B58 766 aa30.92■■■□□ 2.54
CHPF-202ENST00000373891 SETBP1Q9Y6X0 1596 aa30.91■■■□□ 2.54
CHPF-202ENST00000373891 CLTCL1P53675 1640 aa30.88■■■□□ 2.53
CHPF-202ENST00000373891 NUTM2BA6NNL0 878 aaPredicted RBP30.88■■■□□ 2.53
CHPF-202ENST00000373891 NUTM2EB1AL46 878 aaPredicted RBP30.88■■■□□ 2.53
CHPF-202ENST00000373891 NUTM2AQ8IVF1 878 aaPredicted RBP30.88■■■□□ 2.53
CHPF-202ENST00000373891 TRIM52Q96A61 297 aa30.87■■■□□ 2.53
CHPF-202ENST00000373891 METP08581 1390 aa30.87■■■□□ 2.53
CHPF-202ENST00000373891 ASXL1Q8IXJ9 1541 aa30.87■■■□□ 2.53
CHPF-202ENST00000373891 KIF1BO60333 1816 aa30.84■■■□□ 2.53
CHPF-202ENST00000373891 DCCP43146 1447 aa30.83■■■□□ 2.53
CHPF-202ENST00000373891 MST1RQ04912 1400 aa30.83■■■□□ 2.53
CHPF-202ENST00000373891 ZNF772Q68DY9 489 aaPredicted RBP30.83■■■□□ 2.53
CHPF-202ENST00000373891 NHSL1Q5SYE7 1610 aa30.83■■■□□ 2.53
CHPF-202ENST00000373891 NALCNQ8IZF0 1738 aa30.82■■■□□ 2.52
CHPF-202ENST00000373891 NEXMIFQ5QGS0 1516 aa30.82■■■□□ 2.52
CHPF-202ENST00000373891 DDX17Q92841 729 aaKnown RBP30.79■■■□□ 2.52
CHPF-202ENST00000373891 ADGRL3Q9HAR2 1447 aa30.75■■■□□ 2.51
CHPF-202ENST00000373891 SETD5Q9C0A6 1442 aa30.73■■■□□ 2.51
CHPF-202ENST00000373891 AFF2P51816 1311 aa30.73■■■□□ 2.51
CHPF-202ENST00000373891 RXRBP28702 533 aa30.72■■■□□ 2.51
CHPF-202ENST00000373891 UPF1Q92900 1129 aaKnown RBP eCLIP30.71■■■□□ 2.51
CHPF-202ENST00000373891 NAIPQ13075 1403 aa30.69■■■□□ 2.5
CHPF-202ENST00000373891 LRRC59Q96AG4 307 aaKnown RBP30.68■■■□□ 2.5
CHPF-202ENST00000373891 C8orf37Q96NL8 207 aa30.66■■■□□ 2.5
CHPF-202ENST00000373891 PNPLA6Q8IY17 1366 aa30.66■■■□□ 2.5
CHPF-202ENST00000373891 RRBP1Q9P2E9 1410 aaKnown RBP30.65■■■□□ 2.5
CHPF-202ENST00000373891 C1orf167Q5SNV9 1468 aa30.63■■■□□ 2.49
CHPF-202ENST00000373891 PPLO60437 1756 aa30.61■■■□□ 2.49
CHPF-202ENST00000373891 ROBO2Q9HCK4 1378 aa30.6■■■□□ 2.49
CHPF-202ENST00000373891 CDK12Q9NYV4 1490 aaPredicted RBP30.59■■■□□ 2.49
CHPF-202ENST00000373891 PTCH1Q13635 1447 aa30.58■■■□□ 2.49
CHPF-202ENST00000373891 ADAMTS2O95450 1211 aa30.58■■■□□ 2.49
CHPF-202ENST00000373891 VGFO15240 615 aaPredicted RBP30.57■■■□□ 2.48
CHPF-202ENST00000373891 ORAI2Q96SN7 254 aa30.57■■■□□ 2.48
CHPF-202ENST00000373891 RGS12O14924 1447 aa30.56■■■□□ 2.48
CHPF-202ENST00000373891 QTRT2Q9H974 415 aaKnown RBP30.55■■■□□ 2.48
CHPF-202ENST00000373891 LAMC1P11047 1609 aa30.55■■■□□ 2.48
CHPF-202ENST00000373891 SLC4A1APQ9BWU0 796 aaKnown RBP30.54■■■□□ 2.48
CHPF-202ENST00000373891 NGLY1Q96IV0 654 aa30.52■■■□□ 2.48
CHPF-202ENST00000373891 HFM1A2PYH4 1435 aa30.51■■■□□ 2.47
CHPF-202ENST00000373891 RBM6P78332 1123 aaKnown RBP30.5■■■□□ 2.47
CHPF-202ENST00000373891 FOXD1Q16676 465 aa30.49■■■□□ 2.47
CHPF-202ENST00000373891 SOS2Q07890 1332 aaPredicted RBP30.47■■■□□ 2.47
CHPF-202ENST00000373891 RPGRIP1LQ68CZ1 1315 aa30.47■■■□□ 2.47
CHPF-202ENST00000373891 PRAG1Q86YV5 1406 aa30.43■■■□□ 2.46
CHPF-202ENST00000373891 USP21Q9UK80 565 aa30.41■■■□□ 2.46
CHPF-202ENST00000373891 ESCO1Q5FWF5 840 aa30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms