RNA–Protein interactions for RNA: ENST00000373193.7

PTPRT-205, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-205ENST00000373193 DYDC1Q8WWB3 177 aa11.23□□□□□ -0.61
PTPRT-205ENST00000373193 SMC2O95347 1197 aa11.23□□□□□ -0.61
PTPRT-205ENST00000373193 KIAA0754O94854 1291 aa11.22□□□□□ -0.61
PTPRT-205ENST00000373193 HOOK1Q9UJC3 728 aaKnown RBP11.22□□□□□ -0.61
PTPRT-205ENST00000373193 LTV1Q96GA3 475 aaPredicted RBP11.22□□□□□ -0.61
PTPRT-205ENST00000373193 EPS15P42566 896 aa11.22□□□□□ -0.61
PTPRT-205ENST00000373193 RALBP1Q15311 655 aa11.22□□□□□ -0.61
PTPRT-205ENST00000373193 SYNE3Q6ZMZ3 975 aa11.21□□□□□ -0.61
PTPRT-205ENST00000373193 MLECQ14165 292 aa11.21□□□□□ -0.61
PTPRT-205ENST00000373193 MTERF4Q7Z6M4 381 aaKnown RBP11.21□□□□□ -0.61
PTPRT-205ENST00000373193 NFKBIBQ15653 356 aa11.21□□□□□ -0.61
PTPRT-205ENST00000373193 CPLX1O14810 134 aa11.21□□□□□ -0.62
PTPRT-205ENST00000373193 DHX16O60231 1041 aaKnown RBP11.21□□□□□ -0.62
PTPRT-205ENST00000373193 ENOX2Q16206 610 aaKnown RBP11.21□□□□□ -0.62
PTPRT-205ENST00000373193 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.21□□□□□ -0.62
PTPRT-205ENST00000373193 ANKRD62A6NC57 917 aa11.21□□□□□ -0.62
PTPRT-205ENST00000373193 TAF3Q5VWG9 929 aa11.21□□□□□ -0.62
PTPRT-205ENST00000373193 FANCIQ9NVI1 1328 aa11.21□□□□□ -0.62
PTPRT-205ENST00000373193 CAVIN1Q6NZI2 390 aaKnown RBP11.2□□□□□ -0.62
PTPRT-205ENST00000373193 NFXL1Q6ZNB6 911 aa11.2□□□□□ -0.62
PTPRT-205ENST00000373193 CCDC27Q2M243 656 aa11.2□□□□□ -0.62
PTPRT-205ENST00000373193 ELL2O00472 640 aaPredicted RBP11.2□□□□□ -0.62
PTPRT-205ENST00000373193 CGNL1Q0VF96 1302 aa11.2□□□□□ -0.62
PTPRT-205ENST00000373193 NEFHP12036 1026 aa11.2□□□□□ -0.62
PTPRT-205ENST00000373193 TRIM5Q9C035 493 aa11.19□□□□□ -0.62
PTPRT-205ENST00000373193 CCDC47Q96A33 483 aaKnown RBP11.19□□□□□ -0.62
PTPRT-205ENST00000373193 UQCRHLA0A096LP55 91 aa11.19□□□□□ -0.62
PTPRT-205ENST00000373193 UQCRHP07919 91 aa11.19□□□□□ -0.62
PTPRT-205ENST00000373193 ZNF526Q8TF50 670 aaPredicted RBP11.19□□□□□ -0.62
PTPRT-205ENST00000373193 ERCC4Q92889 916 aaPredicted RBP11.19□□□□□ -0.62
PTPRT-205ENST00000373193 CHMP5Q9NZZ3 219 aa11.19□□□□□ -0.62
PTPRT-205ENST00000373193 SAMD1Q6SPF0 538 aaPredicted RBP11.19□□□□□ -0.62
PTPRT-205ENST00000373193 CCDC73Q6ZRK6 1079 aa11.19□□□□□ -0.62
PTPRT-205ENST00000373193 OLFM4Q6UX06 510 aa11.19□□□□□ -0.62
PTPRT-205ENST00000373193 COG6Q9Y2V7 657 aa11.18□□□□□ -0.62
PTPRT-205ENST00000373193 LMOD3Q0VAK6 560 aa11.18□□□□□ -0.62
PTPRT-205ENST00000373193 TRIM34Q9BYJ4 488 aa11.18□□□□□ -0.62
PTPRT-205ENST00000373193 SMC3Q9UQE7 1217 aa11.18□□□□□ -0.62
PTPRT-205ENST00000373193 TRERF1Q96PN7 1200 aa11.18□□□□□ -0.62
PTPRT-205ENST00000373193 OFD1O75665 1012 aa11.18□□□□□ -0.62
PTPRT-205ENST00000373193 GIMAP7Q8NHV1 300 aa11.18□□□□□ -0.62
PTPRT-205ENST00000373193 BRPF1P55201 1214 aaPredicted RBP11.18□□□□□ -0.62
PTPRT-205ENST00000373193 CCDC43Q96MW1 224 aaKnown RBP11.18□□□□□ -0.62
PTPRT-205ENST00000373193 TICAM2Q86XR7 235 aa11.18□□□□□ -0.62
PTPRT-205ENST00000373193 CCDC173Q0VFZ6 552 aa11.17□□□□□ -0.62
PTPRT-205ENST00000373193 DEF6Q9H4E7 631 aa11.17□□□□□ -0.62
PTPRT-205ENST00000373193 NGEFQ8N5V2 710 aa11.17□□□□□ -0.62
PTPRT-205ENST00000373193 GPATCH11Q8N954 259 aa11.17□□□□□ -0.62
PTPRT-205ENST00000373193 TAX1BP1Q86VP1 789 aa11.17□□□□□ -0.62
PTPRT-205ENST00000373193 FMNL2Q96PY5 1086 aa11.17□□□□□ -0.62
PTPRT-205ENST00000373193 RRP1P56182 461 aaKnown RBP11.17□□□□□ -0.62
PTPRT-205ENST00000373193 GTF2E1P29083 439 aaPredicted RBP11.17□□□□□ -0.62
PTPRT-205ENST00000373193 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.17□□□□□ -0.62
PTPRT-205ENST00000373193 CLASRPQ8N2M8 674 aaKnown RBP11.16□□□□□ -0.62
PTPRT-205ENST00000373193 ZRSR2Q15696 482 aaKnown RBP11.16□□□□□ -0.62
PTPRT-205ENST00000373193 FAM177A1Q8N128 213 aaPredicted RBP11.16□□□□□ -0.62
PTPRT-205ENST00000373193 NECTIN2Q92692 538 aa11.16□□□□□ -0.62
PTPRT-205ENST00000373193 MRE11P49959 708 aa11.16□□□□□ -0.62
PTPRT-205ENST00000373193 KANK1Q14678 1352 aa11.16□□□□□ -0.62
PTPRT-205ENST00000373193 CCAR1Q8IX12 1150 aaKnown RBP11.16□□□□□ -0.62
PTPRT-205ENST00000373193 REC8O95072 547 aa11.16□□□□□ -0.62
PTPRT-205ENST00000373193 NAT10Q9H0A0 1025 aaKnown RBP11.15□□□□□ -0.62
PTPRT-205ENST00000373193 GOLGA6L10A6NI86 522 aa11.15□□□□□ -0.62
PTPRT-205ENST00000373193 TSPY26PQ9H489 355 aa11.15□□□□□ -0.62
PTPRT-205ENST00000373193 TNNT1P13805 278 aa11.15□□□□□ -0.62
PTPRT-205ENST00000373193 ZKSCAN1P17029 563 aaPredicted RBP11.15□□□□□ -0.62
PTPRT-205ENST00000373193 CCNB3Q8WWL7 1395 aa11.15□□□□□ -0.62
PTPRT-205ENST00000373193 MYO6Q9UM54 1294 aa11.15□□□□□ -0.63
PTPRT-205ENST00000373193 EEA1Q15075 1411 aa11.14□□□□□ -0.63
PTPRT-205ENST00000373193 SEPT7Q16181 437 aaKnown RBP11.14□□□□□ -0.63
PTPRT-205ENST00000373193 CTDP1Q9Y5B0 961 aaPredicted RBP11.14□□□□□ -0.63
PTPRT-205ENST00000373193 INCENPQ9NQS7 918 aa11.14□□□□□ -0.63
PTPRT-205ENST00000373193 IPO4Q8TEX9 1081 aaKnown RBP11.14□□□□□ -0.63
PTPRT-205ENST00000373193 ZFP91Q96JP5 570 aaPredicted RBP11.14□□□□□ -0.63
PTPRT-205ENST00000373193 MTMR7Q9Y216 660 aa11.14□□□□□ -0.63
PTPRT-205ENST00000373193 TRAK2O60296 914 aa11.13□□□□□ -0.63
PTPRT-205ENST00000373193 CPLX2Q6PUV4 134 aaKnown RBP11.13□□□□□ -0.63
PTPRT-205ENST00000373193 SDF4Q9BRK5 362 aa11.13□□□□□ -0.63
PTPRT-205ENST00000373193 C22orf23Q9BZE7 217 aa11.13□□□□□ -0.63
PTPRT-205ENST00000373193 NEXNQ0ZGT2 675 aa11.12□□□□□ -0.63
PTPRT-205ENST00000373193 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.12□□□□□ -0.63
PTPRT-205ENST00000373193 FYB1O15117 783 aa11.12□□□□□ -0.63
PTPRT-205ENST00000373193 HDAC5Q9UQL6 1122 aa11.12□□□□□ -0.63
PTPRT-205ENST00000373193 CEBPZQ03701 1054 aaKnown RBP11.12□□□□□ -0.63
PTPRT-205ENST00000373193 RUFY2Q8WXA3 655 aa11.12□□□□□ -0.63
PTPRT-205ENST00000373193 GOLGA6L7A0A1B0GV03 622 aa11.12□□□□□ -0.63
PTPRT-205ENST00000373193 NUCB2P80303 420 aa11.12□□□□□ -0.63
PTPRT-205ENST00000373193 PKD2Q13563 968 aa11.12□□□□□ -0.63
PTPRT-205ENST00000373193 NUTM2DQ5VT03 806 aaPredicted RBP11.12□□□□□ -0.63
PTPRT-205ENST00000373193 SETD5Q9C0A6 1442 aa11.11□□□□□ -0.63
PTPRT-205ENST00000373193 ZKSCAN2Q63HK3 967 aa11.11□□□□□ -0.63
PTPRT-205ENST00000373193 RSPH4AQ5TD94 716 aa11.11□□□□□ -0.63
PTPRT-205ENST00000373193 IFIT2P09913 472 aaKnown RBP11.11□□□□□ -0.63
PTPRT-205ENST00000373193 E9PSI1 815 aa11.11□□□□□ -0.63
PTPRT-205ENST00000373193 CHMP4AQ9BY43 222 aa11.11□□□□□ -0.63
PTPRT-205ENST00000373193 ZHX1Q9UKY1 873 aaPredicted RBP11.11□□□□□ -0.63
PTPRT-205ENST00000373193 EIF4G1Q04637 1599 aaKnown RBP11.1□□□□□ -0.63
PTPRT-205ENST00000373193 CHMP4CQ96CF2 233 aa11.1□□□□□ -0.63
PTPRT-205ENST00000373193 ATP2B1P20020 1258 aa11.1□□□□□ -0.63
PTPRT-205ENST00000373193 PAF1Q8N7H5 531 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms