RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 NLRP6P59044 892 aa9.61□□□□□ -0.87
USP1-202ENST00000371146 CHRNA2Q15822 529 aa9.61□□□□□ -0.87
USP1-202ENST00000371146 ABTB2Q8N961 1025 aa9.61□□□□□ -0.87
USP1-202ENST00000371146 NBPF8Q3BBV2 869 aa9.6□□□□□ -0.87
USP1-202ENST00000371146 NOS1P29475 1434 aa9.6□□□□□ -0.87
USP1-202ENST00000371146 NEUROD2Q15784 382 aa9.6□□□□□ -0.87
USP1-202ENST00000371146 CABP1Q9NZU7 370 aa9.6□□□□□ -0.87
USP1-202ENST00000371146 SYTL4Q96C24 671 aaPredicted RBP9.6□□□□□ -0.87
USP1-202ENST00000371146 SLAIN2Q9P270 581 aa9.6□□□□□ -0.87
USP1-202ENST00000371146 SLC12A5Q9H2X9 1139 aa9.59□□□□□ -0.87
USP1-202ENST00000371146 NPATQ14207 1427 aa9.59□□□□□ -0.87
USP1-202ENST00000371146 HSPA5P11021 654 aaKnown RBP9.59□□□□□ -0.88
USP1-202ENST00000371146 HSPA1LP34931 641 aa9.59□□□□□ -0.88
USP1-202ENST00000371146 CDK19Q9BWU1 502 aa9.59□□□□□ -0.88
USP1-202ENST00000371146 DISP3Q9P2K9 1392 aa9.58□□□□□ -0.88
USP1-202ENST00000371146 RRBP1Q9P2E9 1410 aaKnown RBP9.58□□□□□ -0.88
USP1-202ENST00000371146 ZEB1P37275 1124 aaPredicted RBP9.58□□□□□ -0.88
USP1-202ENST00000371146 RIMS2Q9UQ26 1411 aa9.58□□□□□ -0.88
USP1-202ENST00000371146 DHX57Q6P158 1386 aaKnown RBP9.58□□□□□ -0.88
USP1-202ENST00000371146 TMEM94Q12767 1356 aa9.57□□□□□ -0.88
USP1-202ENST00000371146 UGGT1Q9NYU2 1555 aa9.57□□□□□ -0.88
USP1-202ENST00000371146 U2SURPO15042 1029 aaKnown RBP9.57□□□□□ -0.88
USP1-202ENST00000371146 CADPS2Q86UW7 1296 aa9.57□□□□□ -0.88
USP1-202ENST00000371146 GGNBP2Q9H3C7 697 aa9.57□□□□□ -0.88
USP1-202ENST00000371146 ABCC1P33527 1531 aa9.57□□□□□ -0.88
USP1-202ENST00000371146 MLH3Q9UHC1 1453 aa9.57□□□□□ -0.88
USP1-202ENST00000371146 ANO8Q9HCE9 1232 aaPredicted RBP9.56□□□□□ -0.88
USP1-202ENST00000371146 PRDM11Q9NQV5 511 aa9.56□□□□□ -0.88
USP1-202ENST00000371146 MSH6P52701 1360 aa9.56□□□□□ -0.88
USP1-202ENST00000371146 ABCA9Q8IUA7 1624 aa9.56□□□□□ -0.88
USP1-202ENST00000371146 FAM182BQ5T319 152 aa9.56□□□□□ -0.88
USP1-202ENST00000371146 ARAP3Q8WWN8 1544 aa9.56□□□□□ -0.88
USP1-202ENST00000371146 SRCAPQ6ZRS2 3230 aa9.56□□□□□ -0.88
USP1-202ENST00000371146 TMF1P82094 1093 aa9.56□□□□□ -0.88
USP1-202ENST00000371146 C19orf44Q9H6X5 657 aa9.56□□□□□ -0.88
USP1-202ENST00000371146 KIF13AQ9H1H9 1805 aa9.55□□□□□ -0.88
USP1-202ENST00000371146 CENPJQ9HC77 1338 aaPredicted RBP9.55□□□□□ -0.88
USP1-202ENST00000371146 HFM1A2PYH4 1435 aa9.55□□□□□ -0.88
USP1-202ENST00000371146 HDGFL2Q7Z4V5 671 aaPredicted RBP9.55□□□□□ -0.88
USP1-202ENST00000371146 KNSTRNQ9Y448 316 aa9.55□□□□□ -0.88
USP1-202ENST00000371146 AMPHP49418 695 aa9.55□□□□□ -0.88
USP1-202ENST00000371146 ZNF330Q9Y3S2 320 aaPredicted RBP9.55□□□□□ -0.88
USP1-202ENST00000371146 KLHL34Q8N239 644 aa9.54□□□□□ -0.88
USP1-202ENST00000371146 PKNOX2Q96KN3 472 aa9.54□□□□□ -0.88
USP1-202ENST00000371146 KRT28Q7Z3Y7 464 aa9.54□□□□□ -0.88
USP1-202ENST00000371146 NLRP2Q9NX02 1062 aa9.54□□□□□ -0.88
USP1-202ENST00000371146 CNTLNQ9NXG0 1405 aa9.54□□□□□ -0.88
USP1-202ENST00000371146 TMEM2Q9UHN6 1383 aa9.54□□□□□ -0.88
USP1-202ENST00000371146 NUDT16Q96DE0 195 aaKnown RBP9.53□□□□□ -0.88
USP1-202ENST00000371146 PHF8Q9UPP1 1060 aa9.53□□□□□ -0.88
USP1-202ENST00000371146 RTEL1-TNFRSF6BF6WH68 1400 aa9.53□□□□□ -0.88
USP1-202ENST00000371146 HECW2Q9P2P5 1572 aa9.53□□□□□ -0.88
USP1-202ENST00000371146 RIMS1Q86UR5 1692 aaKnown RBP9.53□□□□□ -0.88
USP1-202ENST00000371146 CFAP43Q8NDM7 1665 aa9.53□□□□□ -0.88
USP1-202ENST00000371146 CDC42BPBQ9Y5S2 1711 aa9.53□□□□□ -0.88
USP1-202ENST00000371146 DUOX2Q9NRD8 1548 aa9.53□□□□□ -0.88
USP1-202ENST00000371146 CDC42BPAQ5VT25 1732 aa9.53□□□□□ -0.88
USP1-202ENST00000371146 FAM9BQ8IZU0 186 aa9.52□□□□□ -0.88
USP1-202ENST00000371146 MAGI2Q86UL8 1455 aa9.52□□□□□ -0.88
USP1-202ENST00000371146 MADDQ8WXG6 1647 aa9.52□□□□□ -0.89
USP1-202ENST00000371146 ROCK1Q13464 1354 aa9.52□□□□□ -0.89
USP1-202ENST00000371146 MSH5O43196 834 aa9.51□□□□□ -0.89
USP1-202ENST00000371146 ZRANB1Q9UGI0 708 aa9.51□□□□□ -0.89
USP1-202ENST00000371146 TBX22Q9Y458 520 aa9.51□□□□□ -0.89
USP1-202ENST00000371146 ITSN2Q9NZM3 1697 aa9.5□□□□□ -0.89
USP1-202ENST00000371146 LRRIQ1Q96JM4 1722 aa9.5□□□□□ -0.89
USP1-202ENST00000371146 EVC2Q86UK5 1308 aa9.5□□□□□ -0.89
USP1-202ENST00000371146 METP08581 1390 aa9.5□□□□□ -0.89
USP1-202ENST00000371146 NPHP4O75161 1426 aaPredicted RBP9.5□□□□□ -0.89
USP1-202ENST00000371146 MORC1Q86VD1 984 aa9.5□□□□□ -0.89
USP1-202ENST00000371146 DDX54Q8TDD1 881 aaKnown RBP9.49□□□□□ -0.89
USP1-202ENST00000371146 PREX2Q70Z35 1606 aa9.49□□□□□ -0.89
USP1-202ENST00000371146 RRS1Q15050 365 aaKnown RBP9.49□□□□□ -0.89
USP1-202ENST00000371146 NEFMP07197 916 aa9.49□□□□□ -0.89
USP1-202ENST00000371146 TOM1L2Q6ZVM7 507 aa9.49□□□□□ -0.89
USP1-202ENST00000371146 LAS1LQ9Y4W2 734 aaKnown RBP9.49□□□□□ -0.89
USP1-202ENST00000371146 GLI2P10070 1586 aa9.48□□□□□ -0.89
USP1-202ENST00000371146 PANK3Q9H999 370 aa9.48□□□□□ -0.89
USP1-202ENST00000371146 GPRASP1Q5JY77 1395 aa9.48□□□□□ -0.89
USP1-202ENST00000371146 PLEKHH1Q9ULM0 1364 aa9.48□□□□□ -0.89
USP1-202ENST00000371146 TERF2IPQ9NYB0 399 aa9.48□□□□□ -0.89
USP1-202ENST00000371146 PPP1R1BQ9UD71 204 aaPredicted RBP9.48□□□□□ -0.89
USP1-202ENST00000371146 WWC3Q9ULE0 1092 aa9.48□□□□□ -0.89
USP1-202ENST00000371146 ZNF428Q96B54 188 aa9.47□□□□□ -0.89
USP1-202ENST00000371146 CCDC61Q9Y6R9 512 aa9.47□□□□□ -0.89
USP1-202ENST00000371146 USHBP1Q8N6Y0 703 aa9.47□□□□□ -0.89
USP1-202ENST00000371146 MAP3K1Q13233 1512 aa9.47□□□□□ -0.89
USP1-202ENST00000371146 MAP3K4Q9Y6R4 1608 aa9.47□□□□□ -0.89
USP1-202ENST00000371146 DIP2CQ9Y2E4 1556 aa9.47□□□□□ -0.89
USP1-202ENST00000371146 NME9Q86XW9 330 aa9.47□□□□□ -0.89
USP1-202ENST00000371146 C14orf93Q9H972 538 aaKnown RBP9.47□□□□□ -0.89
USP1-202ENST00000371146 WASLO00401 505 aaPredicted RBP9.46□□□□□ -0.89
USP1-202ENST00000371146 ERICH6BQ5W0A0 696 aa9.46□□□□□ -0.9
USP1-202ENST00000371146 COG3Q96JB2 828 aa9.46□□□□□ -0.9
USP1-202ENST00000371146 ANKRD30BQ9BXX2 1392 aa9.46□□□□□ -0.9
USP1-202ENST00000371146 ABCA6Q8N139 1617 aa9.45□□□□□ -0.9
USP1-202ENST00000371146 ANP32CO43423 234 aa9.45□□□□□ -0.9
USP1-202ENST00000371146 CDCA8Q53HL2 280 aa9.45□□□□□ -0.9
USP1-202ENST00000371146 ACEP12821 1306 aa9.45□□□□□ -0.9
USP1-202ENST00000371146 LRRC59Q96AG4 307 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms