RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 PPP4R3CPQ6ZMV5 832 aa19.17■□□□□ 0.66
MRPL55-209ENST00000366735 SLC52A1Q9NWF4 448 aa19.16■□□□□ 0.66
MRPL55-209ENST00000366735 IDI1Q13907 227 aa19.15■□□□□ 0.66
MRPL55-209ENST00000366735 CHD2O14647 1828 aaKnown RBP19.14■□□□□ 0.65
MRPL55-209ENST00000366735 ROBO1Q9Y6N7 1651 aa19.14■□□□□ 0.65
MRPL55-209ENST00000366735 E9PCH4 1651 aa19.12■□□□□ 0.65
MRPL55-209ENST00000366735 TMEM131LA2VDJ0 1609 aa19.12■□□□□ 0.65
MRPL55-209ENST00000366735 IQGAP3Q86VI3 1631 aa19.12■□□□□ 0.65
MRPL55-209ENST00000366735 KCNA6P17658 529 aa19.11■□□□□ 0.65
MRPL55-209ENST00000366735 TMEM94Q12767 1356 aa19.1■□□□□ 0.65
MRPL55-209ENST00000366735 FAM135BQ49AJ0 1406 aa19.09■□□□□ 0.65
MRPL55-209ENST00000366735 HDGFP51858 240 aaKnown RBP19.09■□□□□ 0.65
MRPL55-209ENST00000366735 BCANQ96GW7 911 aa19.09■□□□□ 0.65
MRPL55-209ENST00000366735 DIP2AQ14689 1571 aa19.09■□□□□ 0.65
MRPL55-209ENST00000366735 PLEKHG1Q9ULL1 1385 aa19.07■□□□□ 0.64
MRPL55-209ENST00000366735 PHLPP1O60346 1717 aa19.07■□□□□ 0.64
MRPL55-209ENST00000366735 ZFYVE9O95405 1425 aa19.07■□□□□ 0.64
MRPL55-209ENST00000366735 MSH6P52701 1360 aa19.06■□□□□ 0.64
MRPL55-209ENST00000366735 ROCK1Q13464 1354 aa19.06■□□□□ 0.64
MRPL55-209ENST00000366735 PPP1R15AO75807 674 aaPredicted RBP19.06■□□□□ 0.64
MRPL55-209ENST00000366735 PROSER2Q86WR7 435 aaPredicted RBP19.06■□□□□ 0.64
MRPL55-209ENST00000366735 SLC26A8Q96RN1 970 aa19.06■□□□□ 0.64
MRPL55-209ENST00000366735 RIMS2Q9UQ26 1411 aa19.06■□□□□ 0.64
MRPL55-209ENST00000366735 SPHKAPQ2M3C7 1700 aa19.03■□□□□ 0.64
MRPL55-209ENST00000366735 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.02■□□□□ 0.64
MRPL55-209ENST00000366735 TRPM2O94759 1503 aa19■□□□□ 0.63
MRPL55-209ENST00000366735 NCOA3Q9Y6Q9 1424 aa18.99■□□□□ 0.63
MRPL55-209ENST00000366735 CHGAP10645 457 aaKnown RBP18.98■□□□□ 0.63
MRPL55-209ENST00000366735 NCBP3Q53F19 620 aaKnown RBP18.98■□□□□ 0.63
MRPL55-209ENST00000366735 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.97■□□□□ 0.63
MRPL55-209ENST00000366735 PIK3R4Q99570 1358 aa18.96■□□□□ 0.63
MRPL55-209ENST00000366735 TBX22Q9Y458 520 aa18.94■□□□□ 0.62
MRPL55-209ENST00000366735 KIF1BO60333 1816 aa18.94■□□□□ 0.62
MRPL55-209ENST00000366735 NUP155O75694 1391 aa18.93■□□□□ 0.62
MRPL55-209ENST00000366735 COL16A1Q07092 1604 aaPredicted RBP18.93■□□□□ 0.62
MRPL55-209ENST00000366735 RBM33Q96EV2 1170 aaKnown RBP18.93■□□□□ 0.62
MRPL55-209ENST00000366735 C14orf37Q86TY3 774 aa18.92■□□□□ 0.62
MRPL55-209ENST00000366735 SHPRHQ149N8 1683 aa18.92■□□□□ 0.62
MRPL55-209ENST00000366735 ADAMTS13Q76LX8 1427 aa18.91■□□□□ 0.62
MRPL55-209ENST00000366735 SETD1AO15047 1707 aaKnown RBP18.91■□□□□ 0.62
MRPL55-209ENST00000366735 SLAIN2Q9P270 581 aa18.91■□□□□ 0.62
MRPL55-209ENST00000366735 JCADQ9P266 1359 aa18.91■□□□□ 0.62
MRPL55-209ENST00000366735 AHDC1Q5TGY3 1603 aaPredicted RBP18.9■□□□□ 0.62
MRPL55-209ENST00000366735 XRN1Q8IZH2 1706 aaKnown RBP18.9■□□□□ 0.62
MRPL55-209ENST00000366735 SETBP1Q9Y6X0 1596 aa18.89■□□□□ 0.62
MRPL55-209ENST00000366735 NRXN3Q9Y4C0 1643 aa18.89■□□□□ 0.61
MRPL55-209ENST00000366735 ITGAEP38570 1179 aa18.88■□□□□ 0.61
MRPL55-209ENST00000366735 CADPS2Q86UW7 1296 aa18.88■□□□□ 0.61
MRPL55-209ENST00000366735 DCCP43146 1447 aa18.86■□□□□ 0.61
MRPL55-209ENST00000366735 ATF3P18847 181 aa18.86■□□□□ 0.61
MRPL55-209ENST00000366735 RGS17Q9UGC6 210 aaPredicted RBP18.86■□□□□ 0.61
MRPL55-209ENST00000366735 NUTM2DQ5VT03 806 aaPredicted RBP18.85■□□□□ 0.61
MRPL55-209ENST00000366735 CLTCL1P53675 1640 aa18.85■□□□□ 0.61
MRPL55-209ENST00000366735 C19orf44Q9H6X5 657 aa18.84■□□□□ 0.61
MRPL55-209ENST00000366735 SPATA31A6Q5VVP1 1343 aa18.82■□□□□ 0.6
MRPL55-209ENST00000366735 NHSL1Q5SYE7 1610 aa18.82■□□□□ 0.6
MRPL55-209ENST00000366735 ZNF326Q5BKZ1 582 aaKnown RBP18.81■□□□□ 0.6
MRPL55-209ENST00000366735 NEXMIFQ5QGS0 1516 aa18.8■□□□□ 0.6
MRPL55-209ENST00000366735 AMOTL2Q9Y2J4 779 aa18.8■□□□□ 0.6
MRPL55-209ENST00000366735 NALCNQ8IZF0 1738 aa18.8■□□□□ 0.6
MRPL55-209ENST00000366735 PTPRUQ92729 1446 aa18.79■□□□□ 0.6
MRPL55-209ENST00000366735 RRBP1Q9P2E9 1410 aaKnown RBP18.78■□□□□ 0.6
MRPL55-209ENST00000366735 MEX3CQ5U5Q3 659 aaKnown RBP18.78■□□□□ 0.6
MRPL55-209ENST00000366735 POTEAQ6S8J7 498 aa18.78■□□□□ 0.6
MRPL55-209ENST00000366735 ASXL1Q8IXJ9 1541 aa18.78■□□□□ 0.6
MRPL55-209ENST00000366735 NPM3O75607 178 aaKnown RBP18.77■□□□□ 0.6
MRPL55-209ENST00000366735 LRP6O75581 1613 aa18.76■□□□□ 0.59
MRPL55-209ENST00000366735 PPLO60437 1756 aa18.75■□□□□ 0.59
MRPL55-209ENST00000366735 ADGRL3Q9HAR2 1447 aa18.74■□□□□ 0.59
MRPL55-209ENST00000366735 ZNF772Q68DY9 489 aaPredicted RBP18.73■□□□□ 0.59
MRPL55-209ENST00000366735 PPARGC1BQ86YN6 1023 aaKnown RBP18.73■□□□□ 0.59
MRPL55-209ENST00000366735 MST1RQ04912 1400 aa18.73■□□□□ 0.59
MRPL55-209ENST00000366735 NAIPQ13075 1403 aa18.73■□□□□ 0.59
MRPL55-209ENST00000366735 BRINP3Q76B58 766 aa18.72■□□□□ 0.59
MRPL55-209ENST00000366735 METP08581 1390 aa18.69■□□□□ 0.58
MRPL55-209ENST00000366735 HFM1A2PYH4 1435 aa18.69■□□□□ 0.58
MRPL55-209ENST00000366735 PTCH1Q13635 1447 aa18.69■□□□□ 0.58
MRPL55-209ENST00000366735 SETD5Q9C0A6 1442 aa18.69■□□□□ 0.58
MRPL55-209ENST00000366735 LAMC1P11047 1609 aa18.68■□□□□ 0.58
MRPL55-209ENST00000366735 SLC24A1O60721 1099 aa18.68■□□□□ 0.58
MRPL55-209ENST00000366735 ZBTB22O15209 634 aa18.67■□□□□ 0.58
MRPL55-209ENST00000366735 VGFO15240 615 aaPredicted RBP18.66■□□□□ 0.58
MRPL55-209ENST00000366735 TRIM52Q96A61 297 aa18.65■□□□□ 0.58
MRPL55-209ENST00000366735 PIAS4Q8N2W9 510 aaPredicted RBP18.64■□□□□ 0.57
MRPL55-209ENST00000366735 LRRC59Q96AG4 307 aaKnown RBP18.64■□□□□ 0.57
MRPL55-209ENST00000366735 PRAG1Q86YV5 1406 aa18.64■□□□□ 0.57
MRPL55-209ENST00000366735 CDK12Q9NYV4 1490 aaPredicted RBP18.64■□□□□ 0.57
MRPL55-209ENST00000366735 RPGRIP1LQ68CZ1 1315 aa18.63■□□□□ 0.57
MRPL55-209ENST00000366735 IFT172Q9UG01 1749 aa18.63■□□□□ 0.57
MRPL55-209ENST00000366735 NUTM2BA6NNL0 878 aaPredicted RBP18.62■□□□□ 0.57
MRPL55-209ENST00000366735 NUTM2EB1AL46 878 aaPredicted RBP18.62■□□□□ 0.57
MRPL55-209ENST00000366735 NUTM2AQ8IVF1 878 aaPredicted RBP18.62■□□□□ 0.57
MRPL55-209ENST00000366735 C1orf167Q5SNV9 1468 aa18.6■□□□□ 0.57
MRPL55-209ENST00000366735 RXRBP28702 533 aa18.6■□□□□ 0.57
MRPL55-209ENST00000366735 KNDC1Q76NI1 1749 aa18.6■□□□□ 0.57
MRPL55-209ENST00000366735 CDC42BPGQ6DT37 1551 aa18.59■□□□□ 0.57
MRPL55-209ENST00000366735 PNPLA6Q8IY17 1366 aa18.59■□□□□ 0.57
MRPL55-209ENST00000366735 MARF1Q9Y4F3 1742 aaKnown RBP18.58■□□□□ 0.57
MRPL55-209ENST00000366735 AFF2P51816 1311 aa18.58■□□□□ 0.57
MRPL55-209ENST00000366735 COL22A1Q8NFW1 1626 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms