RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 THSD4Q6ZMP0 1018 aa7.55□□□□□ -1.2
RNU4-48P-201ENST00000365559 LRCH3Q96II8 777 aa7.55□□□□□ -1.2
RNU4-48P-201ENST00000365559 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.55□□□□□ -1.2
RNU4-48P-201ENST00000365559 MDM2Q00987 491 aaPredicted RBP7.54□□□□□ -1.2
RNU4-48P-201ENST00000365559 RNF40O75150 1001 aa7.53□□□□□ -1.2
RNU4-48P-201ENST00000365559 HDGFP51858 240 aaKnown RBP7.53□□□□□ -1.2
RNU4-48P-201ENST00000365559 AMHR2Q16671 573 aa7.53□□□□□ -1.2
RNU4-48P-201ENST00000365559 REPIN1Q9BWE0 567 aaKnown RBP7.53□□□□□ -1.2
RNU4-48P-201ENST00000365559 DAXXQ9UER7 740 aaPredicted RBP7.53□□□□□ -1.2
RNU4-48P-201ENST00000365559 TMUB1Q9BVT8 246 aa7.52□□□□□ -1.21
RNU4-48P-201ENST00000365559 HPS5Q9UPZ3 1129 aa7.52□□□□□ -1.21
RNU4-48P-201ENST00000365559 CLCN1P35523 988 aa7.51□□□□□ -1.21
RNU4-48P-201ENST00000365559 PTPN5P54829 565 aa7.51□□□□□ -1.21
RNU4-48P-201ENST00000365559 PDE4DQ08499 809 aa7.51□□□□□ -1.21
RNU4-48P-201ENST00000365559 SLF2Q8IX21 1173 aa7.51□□□□□ -1.21
RNU4-48P-201ENST00000365559 PARP9Q8IXQ6 854 aa7.51□□□□□ -1.21
RNU4-48P-201ENST00000365559 PLSCR2Q9NRY7 297 aa7.51□□□□□ -1.21
RNU4-48P-201ENST00000365559 SLC10A3P09131 477 aa7.5□□□□□ -1.21
RNU4-48P-201ENST00000365559 TTLL12Q14166 644 aaPredicted RBP7.5□□□□□ -1.21
RNU4-48P-201ENST00000365559 GPCPD1Q9NPB8 672 aa7.5□□□□□ -1.21
RNU4-48P-201ENST00000365559 WBP1LQ9NX94 342 aa7.5□□□□□ -1.21
RNU4-48P-201ENST00000365559 TSR3Q9UJK0 312 aaKnown RBP7.5□□□□□ -1.21
RNU4-48P-201ENST00000365559 DDX11L8A8MPP1 907 aa7.49□□□□□ -1.21
RNU4-48P-201ENST00000365559 PPP4CP60510 307 aa7.49□□□□□ -1.21
RNU4-48P-201ENST00000365559 GIGYF2Q6Y7W6 1299 aaKnown RBP7.48□□□□□ -1.21
RNU4-48P-201ENST00000365559 FAM217BQ9NTX9 383 aaPredicted RBP7.48□□□□□ -1.21
RNU4-48P-201ENST00000365559 SLC4A3P48751 1232 aa7.47□□□□□ -1.21
RNU4-48P-201ENST00000365559 HCSTQ9UBK5 93 aa7.47□□□□□ -1.21
RNU4-48P-201ENST00000365559 SULF1Q8IWU6 871 aa7.46□□□□□ -1.22
RNU4-48P-201ENST00000365559 RDH13Q8NBN7 331 aa7.46□□□□□ -1.22
RNU4-48P-201ENST00000365559 GPBP1L1Q9HC44 474 aaPredicted RBP7.46□□□□□ -1.22
RNU4-48P-201ENST00000365559 CFHP08603 1231 aa7.45□□□□□ -1.22
RNU4-48P-201ENST00000365559 MS4A1P11836 297 aa7.45□□□□□ -1.22
RNU4-48P-201ENST00000365559 CD46P15529 392 aa7.45□□□□□ -1.22
RNU4-48P-201ENST00000365559 SSTR3P32745 418 aaPredicted RBP7.45□□□□□ -1.22
RNU4-48P-201ENST00000365559 APLP1P51693 650 aa7.45□□□□□ -1.22
RNU4-48P-201ENST00000365559 RSPH4AQ5TD94 716 aa7.43□□□□□ -1.22
RNU4-48P-201ENST00000365559 GCGRP47871 477 aa7.42□□□□□ -1.22
RNU4-48P-201ENST00000365559 BRPF1P55201 1214 aaPredicted RBP7.42□□□□□ -1.22
RNU4-48P-201ENST00000365559 NEUROD2Q15784 382 aa7.42□□□□□ -1.22
RNU4-48P-201ENST00000365559 NYAP1Q6ZVC0 841 aa7.42□□□□□ -1.22
RNU4-48P-201ENST00000365559 NECTIN2Q92692 538 aa7.42□□□□□ -1.22
RNU4-48P-201ENST00000365559 KDM4CQ9H3R0 1056 aa7.42□□□□□ -1.22
RNU4-48P-201ENST00000365559 ACTN4O43707 911 aaKnown RBP7.4□□□□□ -1.22
RNU4-48P-201ENST00000365559 KMT5BQ4FZB7 885 aa7.4□□□□□ -1.22
RNU4-48P-201ENST00000365559 BEGAINQ9BUH8 593 aa7.4□□□□□ -1.22
RNU4-48P-201ENST00000365559 FUT2Q10981 343 aa7.39□□□□□ -1.23
RNU4-48P-201ENST00000365559 PRR14Q9BWN1 585 aa7.39□□□□□ -1.23
RNU4-48P-201ENST00000365559 FAM117AQ9C073 453 aa7.38□□□□□ -1.23
RNU4-48P-201ENST00000365559 KDM4AO75164 1064 aa7.37□□□□□ -1.23
RNU4-48P-201ENST00000365559 PUS10Q3MIT2 529 aaKnown RBP7.37□□□□□ -1.23
RNU4-48P-201ENST00000365559 PCDHB3Q9Y5E6 796 aa7.37□□□□□ -1.23
RNU4-48P-201ENST00000365559 COPS2P61201 443 aa7.36□□□□□ -1.23
RNU4-48P-201ENST00000365559 TJAP1Q5JTD0 557 aa7.36□□□□□ -1.23
RNU4-48P-201ENST00000365559 BLOC1S3Q6QNY0 202 aa7.36□□□□□ -1.23
RNU4-48P-201ENST00000365559 SPIRE2Q8WWL2 714 aa7.36□□□□□ -1.23
RNU4-48P-201ENST00000365559 MTRQ99707 1265 aa7.36□□□□□ -1.23
RNU4-48P-201ENST00000365559 ATP6V1AP38606 617 aa7.35□□□□□ -1.23
RNU4-48P-201ENST00000365559 NUTM1Q86Y26 1132 aa7.35□□□□□ -1.23
RNU4-48P-201ENST00000365559 HLA-CQ95604 372 aa7.35□□□□□ -1.23
RNU4-48P-201ENST00000365559 PLEKHG3A1L390 1219 aa7.34□□□□□ -1.23
RNU4-48P-201ENST00000365559 HOXA2O43364 376 aa7.34□□□□□ -1.23
RNU4-48P-201ENST00000365559 MORN1Q5T089 497 aa7.34□□□□□ -1.23
RNU4-48P-201ENST00000365559 ZNF516Q92618 1163 aa7.34□□□□□ -1.23
RNU4-48P-201ENST00000365559 TBC1D2Q9BYX2 928 aa7.34□□□□□ -1.23
RNU4-48P-201ENST00000365559 ITGBL1O95965 494 aaPredicted RBP7.33□□□□□ -1.24
RNU4-48P-201ENST00000365559 USP46P62068 366 aa7.33□□□□□ -1.24
RNU4-48P-201ENST00000365559 GUCA2AQ02747 115 aa7.33□□□□□ -1.24
RNU4-48P-201ENST00000365559 MOXD2PA6NHM9 499 aa7.32□□□□□ -1.24
RNU4-48P-201ENST00000365559 NDUFV2P19404 249 aa7.32□□□□□ -1.24
RNU4-48P-201ENST00000365559 IL27Q8NEV9 243 aa7.32□□□□□ -1.24
RNU4-48P-201ENST00000365559 DDRGK1Q96HY6 314 aa7.32□□□□□ -1.24
RNU4-48P-201ENST00000365559 IL21Q9HBE4 155 aa7.32□□□□□ -1.24
RNU4-48P-201ENST00000365559 SLC27A5Q9Y2P5 690 aa7.32□□□□□ -1.24
RNU4-48P-201ENST00000365559 NR1I2O75469 434 aa7.31□□□□□ -1.24
RNU4-48P-201ENST00000365559 GRIPAP1Q4V328 841 aa7.31□□□□□ -1.24
RNU4-48P-201ENST00000365559 SCUBE3Q8IX30 993 aa7.31□□□□□ -1.24
RNU4-48P-201ENST00000365559 TLL1O43897 1013 aa7.3□□□□□ -1.24
RNU4-48P-201ENST00000365559 ZPR1O75312 459 aa7.3□□□□□ -1.24
RNU4-48P-201ENST00000365559 KCNC4Q03721 635 aa7.3□□□□□ -1.24
RNU4-48P-201ENST00000365559 MYSM1Q5VVJ2 828 aa7.3□□□□□ -1.24
RNU4-48P-201ENST00000365559 NKX2-3Q8TAU0 364 aa7.3□□□□□ -1.24
RNU4-48P-201ENST00000365559 PLA2G2EQ9NZK7 142 aa7.3□□□□□ -1.24
RNU4-48P-201ENST00000365559 DIXDC1Q155Q3 683 aa7.29□□□□□ -1.24
RNU4-48P-201ENST00000365559 PCDHGC3Q9UN70 934 aa7.29□□□□□ -1.24
RNU4-48P-201ENST00000365559 FDX1P10109 184 aa7.28□□□□□ -1.24
RNU4-48P-201ENST00000365559 RSBN1LQ6PCB5 846 aaPredicted RBP7.28□□□□□ -1.24
RNU4-48P-201ENST00000365559 RNF19BQ6ZMZ0 732 aa7.28□□□□□ -1.24
RNU4-48P-201ENST00000365559 RIC3Q7Z5B4 369 aa7.28□□□□□ -1.24
RNU4-48P-201ENST00000365559 THAP11Q96EK4 314 aa7.28□□□□□ -1.24
RNU4-48P-201ENST00000365559 SPTLC1O15269 473 aa7.27□□□□□ -1.25
RNU4-48P-201ENST00000365559 SYMPKQ92797 1274 aaKnown RBP7.27□□□□□ -1.25
RNU4-48P-201ENST00000365559 RSPH6AQ9H0K4 717 aa7.27□□□□□ -1.25
RNU4-48P-201ENST00000365559 POLR3EQ9NVU0 708 aa7.27□□□□□ -1.25
RNU4-48P-201ENST00000365559 LIMD1Q9UGP4 676 aa7.27□□□□□ -1.25
RNU4-48P-201ENST00000365559 PCDHB15Q9Y5E8 787 aa7.27□□□□□ -1.25
RNU4-48P-201ENST00000365559 SH3D19Q5HYK7 790 aa7.26□□□□□ -1.25
RNU4-48P-201ENST00000365559 BRICD5Q6PL45 260 aa7.26□□□□□ -1.25
RNU4-48P-201ENST00000365559 FMNL1O95466 1100 aaPredicted RBP7.25□□□□□ -1.25
RNU4-48P-201ENST00000365559 GJA5P36382 358 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms