RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 FAM98CQ17RN3 349 aaKnown RBP9.23□□□□□ -0.93
RNU6-560P-201ENST00000364007 SWT1Q5T5J6 900 aaKnown RBP9.23□□□□□ -0.93
RNU6-560P-201ENST00000364007 POTEGQ6S5H5 508 aa9.23□□□□□ -0.93
RNU6-560P-201ENST00000364007 DDX11L8A8MPP1 907 aa9.22□□□□□ -0.93
RNU6-560P-201ENST00000364007 DDRGK1Q96HY6 314 aa9.22□□□□□ -0.93
RNU6-560P-201ENST00000364007 BEGAINQ9BUH8 593 aa9.22□□□□□ -0.93
RNU6-560P-201ENST00000364007 POTEMA6NI47 508 aa9.21□□□□□ -0.94
RNU6-560P-201ENST00000364007 NBPF3Q9H094 633 aa9.21□□□□□ -0.94
RNU6-560P-201ENST00000364007 SAMD7Q7Z3H4 446 aa9.2□□□□□ -0.94
RNU6-560P-201ENST00000364007 LAPTM4BQ86VI4 370 aa9.2□□□□□ -0.94
RNU6-560P-201ENST00000364007 MRPL50Q8N5N7 158 aaKnown RBP9.2□□□□□ -0.94
RNU6-560P-201ENST00000364007 CD46P15529 392 aa9.19□□□□□ -0.94
RNU6-560P-201ENST00000364007 CDAN1Q8IWY9 1227 aa9.19□□□□□ -0.94
RNU6-560P-201ENST00000364007 ZFRQ96KR1 1074 aaKnown RBP9.19□□□□□ -0.94
RNU6-560P-201ENST00000364007 SLC10A3P09131 477 aa9.17□□□□□ -0.94
RNU6-560P-201ENST00000364007 HDGFP51858 240 aaKnown RBP9.17□□□□□ -0.94
RNU6-560P-201ENST00000364007 SULF1Q8IWU6 871 aa9.17□□□□□ -0.94
RNU6-560P-201ENST00000364007 RDH13Q8NBN7 331 aa9.16□□□□□ -0.94
RNU6-560P-201ENST00000364007 STAC3Q96MF2 364 aa9.16□□□□□ -0.94
RNU6-560P-201ENST00000364007 GTF3C3Q9Y5Q9 886 aa9.15□□□□□ -0.94
RNU6-560P-201ENST00000364007 GOLGA8CPA6NN73 597 aa9.13□□□□□ -0.95
RNU6-560P-201ENST00000364007 RNF40O75150 1001 aa9.13□□□□□ -0.95
RNU6-560P-201ENST00000364007 SPIRE2Q8WWL2 714 aa9.13□□□□□ -0.95
RNU6-560P-201ENST00000364007 TBC1D2Q9BYX2 928 aa9.13□□□□□ -0.95
RNU6-560P-201ENST00000364007 POLR3EQ9NVU0 708 aa9.12□□□□□ -0.95
RNU6-560P-201ENST00000364007 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.12□□□□□ -0.95
RNU6-560P-201ENST00000364007 GCGRP47871 477 aa9.11□□□□□ -0.95
RNU6-560P-201ENST00000364007 MYSM1Q5VVJ2 828 aa9.11□□□□□ -0.95
RNU6-560P-201ENST00000364007 NUTM1Q86Y26 1132 aa9.11□□□□□ -0.95
RNU6-560P-201ENST00000364007 SLF2Q8IX21 1173 aa9.11□□□□□ -0.95
RNU6-560P-201ENST00000364007 BCAMP50895 628 aa9.1□□□□□ -0.95
RNU6-560P-201ENST00000364007 SKIV2LQ15477 1246 aaKnown RBP9.1□□□□□ -0.95
RNU6-560P-201ENST00000364007 SH3D19Q5HYK7 790 aa9.1□□□□□ -0.95
RNU6-560P-201ENST00000364007 RSPH4AQ5TD94 716 aa9.1□□□□□ -0.95
RNU6-560P-201ENST00000364007 PROCA1Q8NCQ7 364 aaPredicted RBP9.1□□□□□ -0.95
RNU6-560P-201ENST00000364007 WNT2BQ93097 391 aa9.1□□□□□ -0.95
RNU6-560P-201ENST00000364007 LRCH3Q96II8 777 aa9.1□□□□□ -0.95
RNU6-560P-201ENST00000364007 RSPH6AQ9H0K4 717 aa9.1□□□□□ -0.95
RNU6-560P-201ENST00000364007 ANKK1Q8NFD2 765 aa9.09□□□□□ -0.95
RNU6-560P-201ENST00000364007 GOPCQ9HD26 462 aa9.09□□□□□ -0.95
RNU6-560P-201ENST00000364007 SOWAHBA6NEL2 793 aa9.08□□□□□ -0.96
RNU6-560P-201ENST00000364007 KDM4AO75164 1064 aa9.08□□□□□ -0.96
RNU6-560P-201ENST00000364007 NDUFV2P19404 249 aa9.08□□□□□ -0.96
RNU6-560P-201ENST00000364007 SLC4A3P48751 1232 aa9.08□□□□□ -0.96
RNU6-560P-201ENST00000364007 MOXD2PA6NHM9 499 aa9.07□□□□□ -0.96
RNU6-560P-201ENST00000364007 CFHP08603 1231 aa9.07□□□□□ -0.96
RNU6-560P-201ENST00000364007 PCMTD1Q96MG8 357 aaPredicted RBP9.07□□□□□ -0.96
RNU6-560P-201ENST00000364007 LIMD1Q9UGP4 676 aa9.07□□□□□ -0.96
RNU6-560P-201ENST00000364007 DIXDC1Q155Q3 683 aa9.06□□□□□ -0.96
RNU6-560P-201ENST00000364007 RIC3Q7Z5B4 369 aa9.06□□□□□ -0.96
RNU6-560P-201ENST00000364007 KCTD12Q96CX2 325 aaKnown RBP9.06□□□□□ -0.96
RNU6-560P-201ENST00000364007 ATP1B4Q9UN42 357 aaPredicted RBP9.06□□□□□ -0.96
RNU6-560P-201ENST00000364007 HPS5Q9UPZ3 1129 aa9.06□□□□□ -0.96
RNU6-560P-201ENST00000364007 PPP4CP60510 307 aa9.05□□□□□ -0.96
RNU6-560P-201ENST00000364007 HLA-CQ95604 372 aa9.05□□□□□ -0.96
RNU6-560P-201ENST00000364007 CLK2P49760 499 aaKnown RBP9.04□□□□□ -0.96
RNU6-560P-201ENST00000364007 GUCA2AQ02747 115 aa9.04□□□□□ -0.96
RNU6-560P-201ENST00000364007 FUT2Q10981 343 aa9.04□□□□□ -0.96
RNU6-560P-201ENST00000364007 PCDHB15Q9Y5E8 787 aa9.04□□□□□ -0.96
RNU6-560P-201ENST00000364007 HOXA2O43364 376 aa9.03□□□□□ -0.96
RNU6-560P-201ENST00000364007 FBXO31Q5XUX0 539 aaPredicted RBP9.03□□□□□ -0.96
RNU6-560P-201ENST00000364007 RSBN1LQ6PCB5 846 aaPredicted RBP9.03□□□□□ -0.96
RNU6-560P-201ENST00000364007 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.03□□□□□ -0.96
RNU6-560P-201ENST00000364007 TSR3Q9UJK0 312 aaKnown RBP9.03□□□□□ -0.96
RNU6-560P-201ENST00000364007 SPTLC1O15269 473 aa9.02□□□□□ -0.97
RNU6-560P-201ENST00000364007 APLP1P51693 650 aa9.02□□□□□ -0.97
RNU6-560P-201ENST00000364007 USP46P62068 366 aa9.02□□□□□ -0.97
RNU6-560P-201ENST00000364007 CSPP1Q1MSJ5 1256 aa9.02□□□□□ -0.97
RNU6-560P-201ENST00000364007 KMT5BQ4FZB7 885 aa9.02□□□□□ -0.97
RNU6-560P-201ENST00000364007 THSD4Q6ZMP0 1018 aa9.02□□□□□ -0.97
RNU6-560P-201ENST00000364007 WBP1LQ9NX94 342 aa9.02□□□□□ -0.97
RNU6-560P-201ENST00000364007 PUS10Q3MIT2 529 aaKnown RBP9.01□□□□□ -0.97
RNU6-560P-201ENST00000364007 ATP6V1AP38606 617 aa9□□□□□ -0.97
RNU6-560P-201ENST00000364007 PCDHGC3Q9UN70 934 aa9□□□□□ -0.97
RNU6-560P-201ENST00000364007 ACTN4O43707 911 aaKnown RBP8.99□□□□□ -0.97
RNU6-560P-201ENST00000364007 FDX1P10109 184 aa8.99□□□□□ -0.97
RNU6-560P-201ENST00000364007 PTPN5P54829 565 aa8.98□□□□□ -0.97
RNU6-560P-201ENST00000364007 QPCTQ16769 361 aa8.98□□□□□ -0.97
RNU6-560P-201ENST00000364007 NECTIN2Q92692 538 aa8.98□□□□□ -0.97
RNU6-560P-201ENST00000364007 GJA5P36382 358 aa8.97□□□□□ -0.97
RNU6-560P-201ENST00000364007 GRIPAP1Q4V328 841 aa8.97□□□□□ -0.97
RNU6-560P-201ENST00000364007 MORN1Q5T089 497 aa8.97□□□□□ -0.97
RNU6-560P-201ENST00000364007 CABLES1Q8TDN4 633 aa8.97□□□□□ -0.97
RNU6-560P-201ENST00000364007 MYT1LQ9UL68 1186 aa8.97□□□□□ -0.97
RNU6-560P-201ENST00000364007 LILRB3O75022 631 aa8.96□□□□□ -0.98
RNU6-560P-201ENST00000364007 TUSC1Q2TAM9 212 aa8.96□□□□□ -0.98
RNU6-560P-201ENST00000364007 RTL5Q5HYW3 569 aaPredicted RBP8.96□□□□□ -0.98
RNU6-560P-201ENST00000364007 HRCP23327 699 aa8.95□□□□□ -0.98
RNU6-560P-201ENST00000364007 SPNS2Q8IVW8 549 aa8.95□□□□□ -0.98
RNU6-560P-201ENST00000364007 SYMPKQ92797 1274 aaKnown RBP8.95□□□□□ -0.98
RNU6-560P-201ENST00000364007 PCDH10Q9P2E7 1040 aa8.95□□□□□ -0.98
RNU6-560P-201ENST00000364007 SLC27A5Q9Y2P5 690 aa8.95□□□□□ -0.98
RNU6-560P-201ENST00000364007 RFC5P40937 340 aa8.94□□□□□ -0.98
RNU6-560P-201ENST00000364007 PPP2R2DQ66LE6 453 aa8.94□□□□□ -0.98
RNU6-560P-201ENST00000364007 PRR14Q9BWN1 585 aa8.94□□□□□ -0.98
RNU6-560P-201ENST00000364007 TIMELESSQ9UNS1 1208 aa8.94□□□□□ -0.98
RNU6-560P-201ENST00000364007 PCDHB3Q9Y5E6 796 aa8.94□□□□□ -0.98
RNU6-560P-201ENST00000364007 NUTM2BA6NNL0 878 aaPredicted RBP8.93□□□□□ -0.98
RNU6-560P-201ENST00000364007 NUTM2EB1AL46 878 aaPredicted RBP8.93□□□□□ -0.98
RNU6-560P-201ENST00000364007 NUTM2DQ5VT03 806 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms