RNA–Protein interactions for RNA: ENST00000359461.10

YIF1A-201, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene YIF1A, Length 943 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-201ENST00000359461 FAM135BQ49AJ0 1406 aa35.79■■■■□ 3.32
YIF1A-201ENST00000359461 PHF23Q9BUL5 403 aaPredicted RBP35.76■■■■□ 3.32
YIF1A-201ENST00000359461 SENP3Q9H4L4 574 aaPredicted RBP35.76■■■■□ 3.32
YIF1A-201ENST00000359461 ROBO1Q9Y6N7 1651 aa35.75■■■■□ 3.31
YIF1A-201ENST00000359461 SLC26A8Q96RN1 970 aa35.75■■■■□ 3.31
YIF1A-201ENST00000359461 CHD2O14647 1828 aaKnown RBP35.75■■■■□ 3.31
YIF1A-201ENST00000359461 E9PCH4 1651 aa35.75■■■■□ 3.31
YIF1A-201ENST00000359461 IQGAP3Q86VI3 1631 aa35.72■■■■□ 3.31
YIF1A-201ENST00000359461 PLEKHG1Q9ULL1 1385 aa35.69■■■■□ 3.3
YIF1A-201ENST00000359461 ROCK1Q13464 1354 aa35.67■■■■□ 3.3
YIF1A-201ENST00000359461 RIMS2Q9UQ26 1411 aa35.66■■■■□ 3.3
YIF1A-201ENST00000359461 PROSER2Q86WR7 435 aaPredicted RBP35.65■■■■□ 3.3
YIF1A-201ENST00000359461 RBM33Q96EV2 1170 aaKnown RBP35.59■■■■□ 3.29
YIF1A-201ENST00000359461 DIP2AQ14689 1571 aa35.59■■■■□ 3.29
YIF1A-201ENST00000359461 MSH6P52701 1360 aa35.57■■■■□ 3.28
YIF1A-201ENST00000359461 RGS17Q9UGC6 210 aaPredicted RBP35.57■■■■□ 3.28
YIF1A-201ENST00000359461 PHLPP1O60346 1717 aa35.54■■■■□ 3.28
YIF1A-201ENST00000359461 HDGFP51858 240 aaKnown RBP35.53■■■■□ 3.28
YIF1A-201ENST00000359461 ADAMTS13Q76LX8 1427 aa35.53■■■■□ 3.28
YIF1A-201ENST00000359461 BCANQ96GW7 911 aa35.53■■■■□ 3.28
YIF1A-201ENST00000359461 PPP1R15AO75807 674 aaPredicted RBP35.51■■■■□ 3.28
YIF1A-201ENST00000359461 NCOA3Q9Y6Q9 1424 aa35.5■■■■□ 3.27
YIF1A-201ENST00000359461 TBX22Q9Y458 520 aa35.5■■■■□ 3.27
YIF1A-201ENST00000359461 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.49■■■■□ 3.27
YIF1A-201ENST00000359461 SPHKAPQ2M3C7 1700 aa35.46■■■■□ 3.27
YIF1A-201ENST00000359461 COL16A1Q07092 1604 aaPredicted RBP35.46■■■■□ 3.27
YIF1A-201ENST00000359461 PIK3R4Q99570 1358 aa35.45■■■■□ 3.27
YIF1A-201ENST00000359461 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.45■■■■□ 3.27
YIF1A-201ENST00000359461 SLAIN2Q9P270 581 aa35.44■■■■□ 3.26
YIF1A-201ENST00000359461 TRPM2O94759 1503 aa35.42■■■■□ 3.26
YIF1A-201ENST00000359461 NUP155O75694 1391 aa35.42■■■■□ 3.26
YIF1A-201ENST00000359461 CHGAP10645 457 aaKnown RBP35.41■■■■□ 3.26
YIF1A-201ENST00000359461 NRXN3Q9Y4C0 1643 aa35.4■■■■□ 3.26
YIF1A-201ENST00000359461 XRN1Q8IZH2 1706 aaKnown RBP35.37■■■■□ 3.25
YIF1A-201ENST00000359461 JCADQ9P266 1359 aa35.36■■■■□ 3.25
YIF1A-201ENST00000359461 AHDC1Q5TGY3 1603 aaPredicted RBP35.35■■■■□ 3.25
YIF1A-201ENST00000359461 SETBP1Q9Y6X0 1596 aa35.35■■■■□ 3.25
YIF1A-201ENST00000359461 NUTM2DQ5VT03 806 aaPredicted RBP35.35■■■■□ 3.25
YIF1A-201ENST00000359461 PTPRUQ92729 1446 aa35.32■■■■□ 3.25
YIF1A-201ENST00000359461 POTEAQ6S8J7 498 aa35.32■■■■□ 3.24
YIF1A-201ENST00000359461 SHPRHQ149N8 1683 aa35.3■■■■□ 3.24
YIF1A-201ENST00000359461 ITGAEP38570 1179 aa35.28■■■■□ 3.24
YIF1A-201ENST00000359461 CADPS2Q86UW7 1296 aa35.26■■■■□ 3.24
YIF1A-201ENST00000359461 C19orf44Q9H6X5 657 aa35.26■■■■□ 3.24
YIF1A-201ENST00000359461 CLTCL1P53675 1640 aa35.25■■■■□ 3.23
YIF1A-201ENST00000359461 DCCP43146 1447 aa35.24■■■■□ 3.23
YIF1A-201ENST00000359461 C14orf37Q86TY3 774 aa35.24■■■■□ 3.23
YIF1A-201ENST00000359461 LRP6O75581 1613 aa35.23■■■■□ 3.23
YIF1A-201ENST00000359461 AMOTL2Q9Y2J4 779 aa35.22■■■■□ 3.23
YIF1A-201ENST00000359461 SETD1AO15047 1707 aaKnown RBP35.21■■■■□ 3.23
YIF1A-201ENST00000359461 NEXMIFQ5QGS0 1516 aa35.21■■■■□ 3.23
YIF1A-201ENST00000359461 KIF1BO60333 1816 aa35.19■■■■□ 3.22
YIF1A-201ENST00000359461 RRBP1Q9P2E9 1410 aaKnown RBP35.19■■■■□ 3.22
YIF1A-201ENST00000359461 ATF3P18847 181 aa35.18■■■■□ 3.22
YIF1A-201ENST00000359461 SPATA31A6Q5VVP1 1343 aa35.17■■■■□ 3.22
YIF1A-201ENST00000359461 PPARGC1BQ86YN6 1023 aaKnown RBP35.16■■■■□ 3.22
YIF1A-201ENST00000359461 NHSL1Q5SYE7 1610 aa35.16■■■■□ 3.22
YIF1A-201ENST00000359461 ASXL1Q8IXJ9 1541 aa35.13■■■■□ 3.21
YIF1A-201ENST00000359461 NAIPQ13075 1403 aa35.13■■■■□ 3.21
YIF1A-201ENST00000359461 NALCNQ8IZF0 1738 aa35.12■■■■□ 3.21
YIF1A-201ENST00000359461 METP08581 1390 aa35.12■■■■□ 3.21
YIF1A-201ENST00000359461 BRINP3Q76B58 766 aa35.11■■■■□ 3.21
YIF1A-201ENST00000359461 MST1RQ04912 1400 aa35.11■■■■□ 3.21
YIF1A-201ENST00000359461 ZNF326Q5BKZ1 582 aaKnown RBP35.07■■■■□ 3.2
YIF1A-201ENST00000359461 ADGRL3Q9HAR2 1447 aa35.06■■■■□ 3.2
YIF1A-201ENST00000359461 SETD5Q9C0A6 1442 aa35.03■■■■□ 3.2
YIF1A-201ENST00000359461 HFM1A2PYH4 1435 aa34.98■■■■□ 3.19
YIF1A-201ENST00000359461 LAMC1P11047 1609 aa34.97■■■■□ 3.19
YIF1A-201ENST00000359461 PPLO60437 1756 aa34.97■■■■□ 3.19
YIF1A-201ENST00000359461 MEX3CQ5U5Q3 659 aaKnown RBP34.96■■■■□ 3.19
YIF1A-201ENST00000359461 ZNF772Q68DY9 489 aaPredicted RBP34.96■■■■□ 3.19
YIF1A-201ENST00000359461 PTCH1Q13635 1447 aa34.96■■■■□ 3.19
YIF1A-201ENST00000359461 PRAG1Q86YV5 1406 aa34.96■■■■□ 3.19
YIF1A-201ENST00000359461 C1orf167Q5SNV9 1468 aa34.86■■■■□ 3.17
YIF1A-201ENST00000359461 CDK12Q9NYV4 1490 aaPredicted RBP34.86■■■■□ 3.17
YIF1A-201ENST00000359461 PNPLA6Q8IY17 1366 aa34.85■■■■□ 3.17
YIF1A-201ENST00000359461 VGFO15240 615 aaPredicted RBP34.84■■■■□ 3.17
YIF1A-201ENST00000359461 LRRC59Q96AG4 307 aaKnown RBP34.84■■■■□ 3.17
YIF1A-201ENST00000359461 ROBO2Q9HCK4 1378 aa34.84■■■■□ 3.17
YIF1A-201ENST00000359461 RPGRIP1LQ68CZ1 1315 aa34.82■■■■□ 3.17
YIF1A-201ENST00000359461 NUTM2BA6NNL0 878 aaPredicted RBP34.82■■■■□ 3.16
YIF1A-201ENST00000359461 NUTM2EB1AL46 878 aaPredicted RBP34.82■■■■□ 3.16
YIF1A-201ENST00000359461 NUTM2AQ8IVF1 878 aaPredicted RBP34.82■■■■□ 3.16
YIF1A-201ENST00000359461 DDX17Q92841 729 aaKnown RBP34.79■■■■□ 3.16
YIF1A-201ENST00000359461 AFF2P51816 1311 aa34.79■■■■□ 3.16
YIF1A-201ENST00000359461 TRIM52Q96A61 297 aa34.78■■■■□ 3.16
YIF1A-201ENST00000359461 IFT172Q9UG01 1749 aa34.78■■■■□ 3.16
YIF1A-201ENST00000359461 SLC4A1APQ9BWU0 796 aaKnown RBP34.76■■■■□ 3.16
YIF1A-201ENST00000359461 RXRBP28702 533 aa34.75■■■■□ 3.15
YIF1A-201ENST00000359461 CDC42BPGQ6DT37 1551 aa34.74■■■■□ 3.15
YIF1A-201ENST00000359461 UPF1Q92900 1129 aaKnown RBP eCLIP34.73■■■■□ 3.15
YIF1A-201ENST00000359461 COL22A1Q8NFW1 1626 aaPredicted RBP34.72■■■■□ 3.15
YIF1A-201ENST00000359461 SOS2Q07890 1332 aaPredicted RBP34.7■■■■□ 3.15
YIF1A-201ENST00000359461 KNDC1Q76NI1 1749 aa34.67■■■■□ 3.14
YIF1A-201ENST00000359461 SPATA31E1Q6ZUB1 1445 aa34.66■■■■□ 3.14
YIF1A-201ENST00000359461 ORAI2Q96SN7 254 aa34.66■■■■□ 3.14
YIF1A-201ENST00000359461 RGS12O14924 1447 aa34.65■■■■□ 3.14
YIF1A-201ENST00000359461 C8orf37Q96NL8 207 aa34.65■■■■□ 3.14
YIF1A-201ENST00000359461 TECPR2O15040 1411 aa34.64■■■■□ 3.14
YIF1A-201ENST00000359461 CCDC144AA2RUR9 1427 aa34.63■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms