RNA–Protein interactions for RNA: ENST00000359062.3

PDE3A-201, Transcript of phosphodiesterase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE3A, Length 7,576 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3A-201ENST00000359062 COG3Q96JB2 828 aa18.96■□□□□ 0.63
PDE3A-201ENST00000359062 HOMER1Q86YM7 354 aa18.95■□□□□ 0.62
PDE3A-201ENST00000359062 EXOC6Q8TAG9 804 aa18.95■□□□□ 0.62
PDE3A-201ENST00000359062 BCL11BQ9C0K0 894 aaPredicted RBP18.95■□□□□ 0.62
PDE3A-201ENST00000359062 COG6Q9Y2V7 657 aa18.95■□□□□ 0.62
PDE3A-201ENST00000359062 CHMP4CQ96CF2 233 aa18.95■□□□□ 0.62
PDE3A-201ENST00000359062 RRP1P56182 461 aaKnown RBP18.94■□□□□ 0.62
PDE3A-201ENST00000359062 LRRFIP1Q32MZ4 808 aaKnown RBP18.94■□□□□ 0.62
PDE3A-201ENST00000359062 VPS37DQ86XT2 251 aa18.94■□□□□ 0.62
PDE3A-201ENST00000359062 DHX16O60231 1041 aaKnown RBP18.94■□□□□ 0.62
PDE3A-201ENST00000359062 RUFY2Q8WXA3 655 aa18.94■□□□□ 0.62
PDE3A-201ENST00000359062 NEXNQ0ZGT2 675 aa18.93■□□□□ 0.62
PDE3A-201ENST00000359062 E9PSI1 815 aa18.93■□□□□ 0.62
PDE3A-201ENST00000359062 BICD2Q8TD16 824 aa18.93■□□□□ 0.62
PDE3A-201ENST00000359062 CCDC18Q5T9S5 1454 aa18.93■□□□□ 0.62
PDE3A-201ENST00000359062 ST20-MTHFSA0A0A6YYL1 179 aa18.92■□□□□ 0.62
PDE3A-201ENST00000359062 TEFQ10587 303 aa18.92■□□□□ 0.62
PDE3A-201ENST00000359062 CGNL1Q0VF96 1302 aa18.92■□□□□ 0.62
PDE3A-201ENST00000359062 IPO7O95373 1038 aaKnown RBP18.92■□□□□ 0.62
PDE3A-201ENST00000359062 NFXL1Q6ZNB6 911 aa18.92■□□□□ 0.62
PDE3A-201ENST00000359062 TTC5Q8N0Z6 440 aa18.92■□□□□ 0.62
PDE3A-201ENST00000359062 ANKRD20A12PQ8NF67 263 aa18.92■□□□□ 0.62
PDE3A-201ENST00000359062 IFIT2P09913 472 aaKnown RBP18.92■□□□□ 0.62
PDE3A-201ENST00000359062 CPLX2Q6PUV4 134 aaKnown RBP18.92■□□□□ 0.62
PDE3A-201ENST00000359062 HOOK1Q9UJC3 728 aaKnown RBP18.92■□□□□ 0.62
PDE3A-201ENST00000359062 VSIG10Q8N0Z9 540 aa18.91■□□□□ 0.62
PDE3A-201ENST00000359062 CPLX1O14810 134 aa18.91■□□□□ 0.62
PDE3A-201ENST00000359062 CCDC47Q96A33 483 aaKnown RBP18.91■□□□□ 0.62
PDE3A-201ENST00000359062 CECR2Q9BXF3 1484 aa18.9■□□□□ 0.62
PDE3A-201ENST00000359062 SYTL4Q96C24 671 aaPredicted RBP18.9■□□□□ 0.62
PDE3A-201ENST00000359062 ZKSCAN1P17029 563 aaPredicted RBP18.9■□□□□ 0.62
PDE3A-201ENST00000359062 CNKSR2Q8WXI2 1034 aa18.9■□□□□ 0.62
PDE3A-201ENST00000359062 CCDC144AA2RUR9 1427 aa18.9■□□□□ 0.62
PDE3A-201ENST00000359062 CCDC88BA6NC98 1476 aa18.9■□□□□ 0.62
PDE3A-201ENST00000359062 NAP1L1P55209 391 aaKnown RBP18.9■□□□□ 0.62
PDE3A-201ENST00000359062 TEX35Q5T0J7 233 aa18.9■□□□□ 0.62
PDE3A-201ENST00000359062 REC8O95072 547 aa18.89■□□□□ 0.62
PDE3A-201ENST00000359062 WIZO95785 1651 aa18.89■□□□□ 0.61
PDE3A-201ENST00000359062 FAM13BQ9NYF5 915 aa18.88■□□□□ 0.61
PDE3A-201ENST00000359062 SAMD1Q6SPF0 538 aaPredicted RBP18.88■□□□□ 0.61
PDE3A-201ENST00000359062 TRDNQ13061 729 aa18.88■□□□□ 0.61
PDE3A-201ENST00000359062 KRI1Q8N9T8 703 aaKnown RBP18.88■□□□□ 0.61
PDE3A-201ENST00000359062 EVC2Q86UK5 1308 aa18.87■□□□□ 0.61
PDE3A-201ENST00000359062 SASS6Q6UVJ0 657 aa18.87■□□□□ 0.61
PDE3A-201ENST00000359062 ERICH2A1L162 156 aa18.87■□□□□ 0.61
PDE3A-201ENST00000359062 FHOD3Q2V2M9 1422 aa18.86■□□□□ 0.61
PDE3A-201ENST00000359062 VPS37CA5D8V6 355 aaPredicted RBP18.86■□□□□ 0.61
PDE3A-201ENST00000359062 MINK1Q8N4C8 1332 aaPredicted RBP18.85■□□□□ 0.61
PDE3A-201ENST00000359062 UACAQ9BZF9 1416 aa18.85■□□□□ 0.61
PDE3A-201ENST00000359062 RUFY1Q96T51 708 aa18.85■□□□□ 0.61
PDE3A-201ENST00000359062 CCDC43Q96MW1 224 aaKnown RBP18.85■□□□□ 0.61
PDE3A-201ENST00000359062 TDRD9Q8NDG6 1382 aaKnown RBP18.84■□□□□ 0.61
PDE3A-201ENST00000359062 RRP12Q5JTH9 1297 aaKnown RBP18.84■□□□□ 0.61
PDE3A-201ENST00000359062 DDX19BQ9UMR2 479 aa18.84■□□□□ 0.61
PDE3A-201ENST00000359062 RNF20Q5VTR2 975 aa18.84■□□□□ 0.61
PDE3A-201ENST00000359062 SMC3Q9UQE7 1217 aa18.83■□□□□ 0.61
PDE3A-201ENST00000359062 APAF1O14727 1248 aa18.83■□□□□ 0.6
PDE3A-201ENST00000359062 FYB1O15117 783 aa18.83■□□□□ 0.6
PDE3A-201ENST00000359062 RIPK4P57078 832 aa18.82■□□□□ 0.6
PDE3A-201ENST00000359062 G3BP1Q13283 466 aaKnown RBP eCLIP18.82■□□□□ 0.6
PDE3A-201ENST00000359062 IFT57Q9NWB7 429 aa18.82■□□□□ 0.6
PDE3A-201ENST00000359062 ROCK1Q13464 1354 aa18.82■□□□□ 0.6
PDE3A-201ENST00000359062 KDM4AO75164 1064 aa18.81■□□□□ 0.6
PDE3A-201ENST00000359062 AK7Q96M32 723 aa18.81■□□□□ 0.6
PDE3A-201ENST00000359062 CWC22Q9HCG8 908 aaKnown RBP18.81■□□□□ 0.6
PDE3A-201ENST00000359062 CT47A1Q5JQC4 288 aaPredicted RBP18.8■□□□□ 0.6
PDE3A-201ENST00000359062 ZBED9Q6R2W3 1325 aa18.8■□□□□ 0.6
PDE3A-201ENST00000359062 EPS15P42566 896 aa18.8■□□□□ 0.6
PDE3A-201ENST00000359062 ODF2Q5BJF6 829 aa18.8■□□□□ 0.6
PDE3A-201ENST00000359062 USP47Q96K76 1375 aa18.8■□□□□ 0.6
PDE3A-201ENST00000359062 DDX58O95786 925 aaKnown RBP18.8■□□□□ 0.6
PDE3A-201ENST00000359062 FKBP5Q13451 457 aaPredicted RBP18.8■□□□□ 0.6
PDE3A-201ENST00000359062 INTS3Q68E01 1043 aaKnown RBP18.8■□□□□ 0.6
PDE3A-201ENST00000359062 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.79■□□□□ 0.6
PDE3A-201ENST00000359062 DZIP1LQ8IYY4 767 aaKnown RBP18.79■□□□□ 0.6
PDE3A-201ENST00000359062 PSME1Q06323 249 aa18.79■□□□□ 0.6
PDE3A-201ENST00000359062 SMARCA2P51531 1590 aa18.78■□□□□ 0.6
PDE3A-201ENST00000359062 MEX3CQ5U5Q3 659 aaKnown RBP18.78■□□□□ 0.6
PDE3A-201ENST00000359062 DIAPH1O60610 1272 aaKnown RBP18.78■□□□□ 0.6
PDE3A-201ENST00000359062 PDILTQ8N807 584 aa18.78■□□□□ 0.6
PDE3A-201ENST00000359062 PDS5BQ9NTI5 1447 aa18.78■□□□□ 0.6
PDE3A-201ENST00000359062 CHMP5Q9NZZ3 219 aa18.77■□□□□ 0.6
PDE3A-201ENST00000359062 CCDC27Q2M243 656 aa18.77■□□□□ 0.6
PDE3A-201ENST00000359062 MTMR7Q9Y216 660 aa18.77■□□□□ 0.59
PDE3A-201ENST00000359062 SAFBQ15424 915 aaKnown RBP eCLIP18.76■□□□□ 0.597e-8■■■■■ 31.2
PDE3A-201ENST00000359062 RSPH4AQ5TD94 716 aa18.76■□□□□ 0.59
PDE3A-201ENST00000359062 TTLL5Q6EMB2 1281 aa18.76■□□□□ 0.59
PDE3A-201ENST00000359062 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.76■□□□□ 0.595e-18■□□□□ 9.3
PDE3A-201ENST00000359062 MNS1Q8NEH6 495 aa18.76■□□□□ 0.59
PDE3A-201ENST00000359062 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.76■□□□□ 0.59
PDE3A-201ENST00000359062 LNPKQ9C0E8 428 aa18.76■□□□□ 0.59
PDE3A-201ENST00000359062 ZFYVE27Q5T4F4 411 aa18.75■□□□□ 0.59
PDE3A-201ENST00000359062 CALRP27797 417 aaKnown RBP18.75■□□□□ 0.59
PDE3A-201ENST00000359062 HSP90AB2PQ58FF8 381 aa18.75■□□□□ 0.59
PDE3A-201ENST00000359062 TSPYL4Q9UJ04 414 aa18.75■□□□□ 0.59
PDE3A-201ENST00000359062 AIMP1Q12904 312 aaKnown RBP18.75■□□□□ 0.59
PDE3A-201ENST00000359062 OLFM4Q6UX06 510 aa18.75■□□□□ 0.59
PDE3A-201ENST00000359062 NEUROD6Q96NK8 337 aa18.75■□□□□ 0.59
PDE3A-201ENST00000359062 HMOX1P09601 288 aa18.74■□□□□ 0.59
PDE3A-201ENST00000359062 CCDC73Q6ZRK6 1079 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms