RNA–Protein interactions for RNA: ENST00000352127.11

XRCC3-201, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-201ENST00000352127 RTEL1-TNFRSF6BF6WH68 1400 aa23.46■■□□□ 1.35
XRCC3-201ENST00000352127 ADGRF5Q8IZF2 1346 aa23.46■■□□□ 1.35
XRCC3-201ENST00000352127 WDR43Q15061 677 aaKnown RBP eCLIP23.46■■□□□ 1.35
XRCC3-201ENST00000352127 ATP7AQ04656 1500 aa23.45■■□□□ 1.34
XRCC3-201ENST00000352127 ANP32AP39687 249 aaKnown RBP23.45■■□□□ 1.34
XRCC3-201ENST00000352127 ZMYM4Q5VZL5 1548 aa23.44■■□□□ 1.34
XRCC3-201ENST00000352127 KANK1Q14678 1352 aa23.42■■□□□ 1.34
XRCC3-201ENST00000352127 DEPDC5O75140 1603 aa23.41■■□□□ 1.34
XRCC3-201ENST00000352127 TET3O43151 1660 aa23.41■■□□□ 1.34
XRCC3-201ENST00000352127 ADGRL1O94910 1474 aa23.41■■□□□ 1.34
XRCC3-201ENST00000352127 IPO9Q96P70 1041 aaKnown RBP23.41■■□□□ 1.34
XRCC3-201ENST00000352127 CHGAP10645 457 aaKnown RBP23.4■■□□□ 1.34
XRCC3-201ENST00000352127 MYOM1P52179 1685 aa23.39■■□□□ 1.33
XRCC3-201ENST00000352127 INO80Q9ULG1 1556 aaPredicted RBP23.39■■□□□ 1.33
XRCC3-201ENST00000352127 DUSP27Q5VZP5 1158 aa23.38■■□□□ 1.33
XRCC3-201ENST00000352127 ASXL1Q8IXJ9 1541 aa23.37■■□□□ 1.33
XRCC3-201ENST00000352127 SYNMO15061 1565 aa23.37■■□□□ 1.33
XRCC3-201ENST00000352127 PDE4AP27815 886 aa23.37■■□□□ 1.33
XRCC3-201ENST00000352127 CDCA8Q53HL2 280 aa23.37■■□□□ 1.33
XRCC3-201ENST00000352127 ABCA9Q8IUA7 1624 aa23.36■■□□□ 1.33
XRCC3-201ENST00000352127 BCL11AQ9H165 835 aa23.36■■□□□ 1.33
XRCC3-201ENST00000352127 CFAP65Q6ZU64 1925 aaKnown RBP23.36■■□□□ 1.33
XRCC3-201ENST00000352127 CARD14Q9BXL6 1004 aa23.35■■□□□ 1.33
XRCC3-201ENST00000352127 SPINK5Q9NQ38 1064 aaPredicted RBP23.35■■□□□ 1.33
XRCC3-201ENST00000352127 MROH1Q8NDA8 1641 aa23.35■■□□□ 1.33
XRCC3-201ENST00000352127 ARAP3Q8WWN8 1544 aa23.35■■□□□ 1.33
XRCC3-201ENST00000352127 TCERG1O14776 1098 aaKnown RBP23.35■■□□□ 1.33
XRCC3-201ENST00000352127 VWDEQ8N2E2 1590 aa23.34■■□□□ 1.33
XRCC3-201ENST00000352127 INSRP06213 1382 aa23.34■■□□□ 1.33
XRCC3-201ENST00000352127 ZBTB47Q9UFB7 747 aaPredicted RBP23.34■■□□□ 1.33
XRCC3-201ENST00000352127 ABCA6Q8N139 1617 aa23.33■■□□□ 1.33
XRCC3-201ENST00000352127 APAF1O14727 1248 aa23.33■■□□□ 1.32
XRCC3-201ENST00000352127 EIF3AQ14152 1382 aaKnown RBP23.32■■□□□ 1.32
XRCC3-201ENST00000352127 ASXL2Q76L83 1435 aa23.32■■□□□ 1.32
XRCC3-201ENST00000352127 ERVK-7P63135 1459 aa23.32■■□□□ 1.32
XRCC3-201ENST00000352127 GOLGA2Q08379 1002 aa23.32■■□□□ 1.32
XRCC3-201ENST00000352127 SENP3Q9H4L4 574 aaPredicted RBP23.32■■□□□ 1.32
XRCC3-201ENST00000352127 ZNF521Q96K83 1311 aa23.31■■□□□ 1.32
XRCC3-201ENST00000352127 MROH2AA6NES4 1674 aa23.3■■□□□ 1.32
XRCC3-201ENST00000352127 BACH2Q9BYV9 841 aa23.3■■□□□ 1.32
XRCC3-201ENST00000352127 DMRT2Q9Y5R5 561 aa23.3■■□□□ 1.32
XRCC3-201ENST00000352127 KDM5AP29375 1690 aaKnown RBP23.3■■□□□ 1.32
XRCC3-201ENST00000352127 MAP3K4Q9Y6R4 1608 aa23.29■■□□□ 1.32
XRCC3-201ENST00000352127 TNNT2P45379 298 aaPredicted RBP23.29■■□□□ 1.32
XRCC3-201ENST00000352127 TRAK1Q9UPV9 953 aa23.29■■□□□ 1.32
XRCC3-201ENST00000352127 GGT6Q6P531 493 aa23.29■■□□□ 1.32
XRCC3-201ENST00000352127 NUTM2DQ5VT03 806 aaPredicted RBP23.28■■□□□ 1.32
XRCC3-201ENST00000352127 STAC3Q96MF2 364 aa23.27■■□□□ 1.32
XRCC3-201ENST00000352127 PPRC1Q5VV67 1664 aaKnown RBP23.27■■□□□ 1.32
XRCC3-201ENST00000352127 PIK3C2GO75747 1445 aa23.27■■□□□ 1.32
XRCC3-201ENST00000352127 NOS1P29475 1434 aa23.27■■□□□ 1.32
XRCC3-201ENST00000352127 TMEM132EQ6IEE7 984 aa23.27■■□□□ 1.32
XRCC3-201ENST00000352127 KIDINS220Q9ULH0 1771 aa23.26■■□□□ 1.31
XRCC3-201ENST00000352127 SLFN5Q08AF3 891 aa23.26■■□□□ 1.31
XRCC3-201ENST00000352127 KIF1BO60333 1816 aa23.25■■□□□ 1.31
XRCC3-201ENST00000352127 DEKP35659 375 aaKnown RBP23.25■■□□□ 1.31
XRCC3-201ENST00000352127 EFCAB6Q5THR3 1501 aa23.24■■□□□ 1.31
XRCC3-201ENST00000352127 BCAR3O75815 825 aa23.23■■□□□ 1.31
XRCC3-201ENST00000352127 KIAA1210Q9ULL0 1709 aa23.22■■□□□ 1.31
XRCC3-201ENST00000352127 SLC12A5Q9H2X9 1139 aa23.22■■□□□ 1.31
XRCC3-201ENST00000352127 MYOM2P54296 1465 aa23.22■■□□□ 1.31
XRCC3-201ENST00000352127 LAS1LQ9Y4W2 734 aaKnown RBP23.2■■□□□ 1.3
XRCC3-201ENST00000352127 MS4A1P11836 297 aa23.2■■□□□ 1.3
XRCC3-201ENST00000352127 NPC1L1Q9UHC9 1359 aa23.2■■□□□ 1.3
XRCC3-201ENST00000352127 KDM2BQ8NHM5 1336 aa23.19■■□□□ 1.3
XRCC3-201ENST00000352127 CENPJQ9HC77 1338 aaPredicted RBP23.19■■□□□ 1.3
XRCC3-201ENST00000352127 NEUROD2Q15784 382 aa23.19■■□□□ 1.3
XRCC3-201ENST00000352127 IFT172Q9UG01 1749 aa23.18■■□□□ 1.3
XRCC3-201ENST00000352127 RRP7AQ9Y3A4 280 aaKnown RBP23.18■■□□□ 1.3
XRCC3-201ENST00000352127 NPATQ14207 1427 aa23.17■■□□□ 1.3
XRCC3-201ENST00000352127 TRMT2AQ8IZ69 625 aaKnown RBP23.16■■□□□ 1.3
XRCC3-201ENST00000352127 NSD3Q9BZ95 1437 aa23.15■■□□□ 1.3
XRCC3-201ENST00000352127 ZNF518AQ6AHZ1 1483 aa23.14■■□□□ 1.3
XRCC3-201ENST00000352127 RGS3P49796 1198 aa23.13■■□□□ 1.29
XRCC3-201ENST00000352127 MORC1Q86VD1 984 aa23.13■■□□□ 1.29
XRCC3-201ENST00000352127 RAPGEF3O95398 923 aa23.12■■□□□ 1.29
XRCC3-201ENST00000352127 SAFB2Q14151 953 aaKnown RBP eCLIP23.12■■□□□ 1.29
XRCC3-201ENST00000352127 NRXN1Q9ULB1 1477 aa23.12■■□□□ 1.29
XRCC3-201ENST00000352127 ADGRB3O60242 1522 aa23.12■■□□□ 1.29
XRCC3-201ENST00000352127 NPM1P06748 294 aaKnown RBP eCLIP23.12■■□□□ 1.29
XRCC3-201ENST00000352127 NEURL4Q96JN8 1562 aa23.11■■□□□ 1.29
XRCC3-201ENST00000352127 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.11■■□□□ 1.29
XRCC3-201ENST00000352127 NKTRP30414 1462 aaKnown RBP23.11■■□□□ 1.29
XRCC3-201ENST00000352127 FRMPD1Q5SYB0 1578 aa23.1■■□□□ 1.29
XRCC3-201ENST00000352127 CENPQQ7L2Z9 268 aaPredicted RBP23.1■■□□□ 1.29
XRCC3-201ENST00000352127 CD109Q6YHK3 1445 aa23.1■■□□□ 1.29
XRCC3-201ENST00000352127 SLC4A3P48751 1232 aa23.1■■□□□ 1.29
XRCC3-201ENST00000352127 C14orf93Q9H972 538 aaKnown RBP23.1■■□□□ 1.29
XRCC3-201ENST00000352127 E9PSI1 815 aa23.08■■□□□ 1.29
XRCC3-201ENST00000352127 WWC1Q8IX03 1113 aa23.08■■□□□ 1.29
XRCC3-201ENST00000352127 RTL5Q5HYW3 569 aaPredicted RBP23.07■■□□□ 1.28
XRCC3-201ENST00000352127 POGZQ7Z3K3 1410 aa23.06■■□□□ 1.28
XRCC3-201ENST00000352127 LMTK2Q8IWU2 1503 aa23.06■■□□□ 1.28
XRCC3-201ENST00000352127 MYO3AQ8NEV4 1616 aa23.06■■□□□ 1.28
XRCC3-201ENST00000352127 PANK1Q8TE04 598 aa23.06■■□□□ 1.28
XRCC3-201ENST00000352127 QRICH2Q9H0J4 1663 aa23.06■■□□□ 1.28
XRCC3-201ENST00000352127 PPLO60437 1756 aa23.05■■□□□ 1.28
XRCC3-201ENST00000352127 SBNO2Q9Y2G9 1366 aa23.04■■□□□ 1.28
XRCC3-201ENST00000352127 ADGRB1O14514 1584 aa23.04■■□□□ 1.28
XRCC3-201ENST00000352127 POLR3AO14802 1390 aaPredicted RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms