RNA–Protein interactions for RNA: ENST00000338372.6

VSTM1-201, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSTM1, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-201ENST00000338372 SLC26A8Q96RN1 970 aa26.17■■□□□ 1.78
VSTM1-201ENST00000338372 ITGAEP38570 1179 aa26.16■■□□□ 1.78
VSTM1-201ENST00000338372 SCAF1Q9H7N4 1312 aaKnown RBP26.15■■□□□ 1.78
VSTM1-201ENST00000338372 CHD2O14647 1828 aaKnown RBP26.15■■□□□ 1.78
VSTM1-201ENST00000338372 NUP155O75694 1391 aa26.15■■□□□ 1.78
VSTM1-201ENST00000338372 RIMS2Q9UQ26 1411 aa26.14■■□□□ 1.78
VSTM1-201ENST00000338372 PLEKHG1Q9ULL1 1385 aa26.13■■□□□ 1.77
VSTM1-201ENST00000338372 MED1Q15648 1581 aaPredicted RBP26.11■■□□□ 1.77
VSTM1-201ENST00000338372 TMEM94Q12767 1356 aa26.1■■□□□ 1.77
VSTM1-201ENST00000338372 NKTRP30414 1462 aaKnown RBP26.08■■□□□ 1.77
VSTM1-201ENST00000338372 ADAMTS13Q76LX8 1427 aa26.07■■□□□ 1.76
VSTM1-201ENST00000338372 NAIPQ13075 1403 aa26.06■■□□□ 1.76
VSTM1-201ENST00000338372 SPHKAPQ2M3C7 1700 aa26.06■■□□□ 1.76
VSTM1-201ENST00000338372 SOCS7O14512 581 aa26.05■■□□□ 1.76
VSTM1-201ENST00000338372 RBM33Q96EV2 1170 aaKnown RBP26.04■■□□□ 1.76
VSTM1-201ENST00000338372 TBX22Q9Y458 520 aa26.04■■□□□ 1.76
VSTM1-201ENST00000338372 FAM135BQ49AJ0 1406 aa26.04■■□□□ 1.76
VSTM1-201ENST00000338372 PROSER2Q86WR7 435 aaPredicted RBP26.03■■□□□ 1.76
VSTM1-201ENST00000338372 HDGFP51858 240 aaKnown RBP26.01■■□□□ 1.75
VSTM1-201ENST00000338372 SENP3Q9H4L4 574 aaPredicted RBP26.01■■□□□ 1.75
VSTM1-201ENST00000338372 ABCF1Q8NE71 845 aaKnown RBP eCLIP26■■□□□ 1.75
VSTM1-201ENST00000338372 CHGAP10645 457 aaKnown RBP25.99■■□□□ 1.75
VSTM1-201ENST00000338372 NUTM2DQ5VT03 806 aaPredicted RBP25.99■■□□□ 1.75
VSTM1-201ENST00000338372 NRXN3Q9Y4C0 1643 aa25.99■■□□□ 1.75
VSTM1-201ENST00000338372 DIP2AQ14689 1571 aa25.98■■□□□ 1.75
VSTM1-201ENST00000338372 ROBO1Q9Y6N7 1651 aa25.96■■□□□ 1.75
VSTM1-201ENST00000338372 CLTCL1P53675 1640 aa25.96■■□□□ 1.75
VSTM1-201ENST00000338372 PPP1R15AO75807 674 aaPredicted RBP25.95■■□□□ 1.74
VSTM1-201ENST00000338372 BCANQ96GW7 911 aa25.95■■□□□ 1.74
VSTM1-201ENST00000338372 HFM1A2PYH4 1435 aa25.94■■□□□ 1.74
VSTM1-201ENST00000338372 PTPRUQ92729 1446 aa25.94■■□□□ 1.74
VSTM1-201ENST00000338372 PIK3R4Q99570 1358 aa25.94■■□□□ 1.74
VSTM1-201ENST00000338372 TRPM2O94759 1503 aa25.93■■□□□ 1.74
VSTM1-201ENST00000338372 NCOA3Q9Y6Q9 1424 aa25.92■■□□□ 1.74
VSTM1-201ENST00000338372 SETBP1Q9Y6X0 1596 aa25.91■■□□□ 1.74
VSTM1-201ENST00000338372 NEXMIFQ5QGS0 1516 aa25.88■■□□□ 1.73
VSTM1-201ENST00000338372 MSH6P52701 1360 aa25.88■■□□□ 1.73
VSTM1-201ENST00000338372 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.88■■□□□ 1.73
VSTM1-201ENST00000338372 XRN1Q8IZH2 1706 aaKnown RBP25.87■■□□□ 1.73
VSTM1-201ENST00000338372 KIF1BO60333 1816 aa25.86■■□□□ 1.73
VSTM1-201ENST00000338372 SLAIN2Q9P270 581 aa25.86■■□□□ 1.73
VSTM1-201ENST00000338372 RGS17Q9UGC6 210 aaPredicted RBP25.83■■□□□ 1.73
VSTM1-201ENST00000338372 AMOTL2Q9Y2J4 779 aa25.83■■□□□ 1.73
VSTM1-201ENST00000338372 METP08581 1390 aa25.81■■□□□ 1.72
VSTM1-201ENST00000338372 SETD1AO15047 1707 aaKnown RBP25.8■■□□□ 1.72
VSTM1-201ENST00000338372 PHLPP1O60346 1717 aa25.79■■□□□ 1.72
VSTM1-201ENST00000338372 C19orf44Q9H6X5 657 aa25.78■■□□□ 1.72
VSTM1-201ENST00000338372 COL16A1Q07092 1604 aaPredicted RBP25.77■■□□□ 1.72
VSTM1-201ENST00000338372 ZNF326Q5BKZ1 582 aaKnown RBP25.76■■□□□ 1.71
VSTM1-201ENST00000338372 TRIM52Q96A61 297 aa25.75■■□□□ 1.71
VSTM1-201ENST00000338372 PPLO60437 1756 aa25.73■■□□□ 1.71
VSTM1-201ENST00000338372 CADPS2Q86UW7 1296 aa25.72■■□□□ 1.71
VSTM1-201ENST00000338372 SLC4A1APQ9BWU0 796 aaKnown RBP25.72■■□□□ 1.71
VSTM1-201ENST00000338372 AHDC1Q5TGY3 1603 aaPredicted RBP25.71■■□□□ 1.71
VSTM1-201ENST00000338372 PHF23Q9BUL5 403 aaPredicted RBP25.71■■□□□ 1.71
VSTM1-201ENST00000338372 DCCP43146 1447 aa25.7■■□□□ 1.7
VSTM1-201ENST00000338372 FOXD1Q16676 465 aa25.67■■□□□ 1.7
VSTM1-201ENST00000338372 NALCNQ8IZF0 1738 aa25.66■■□□□ 1.7
VSTM1-201ENST00000338372 RPGRIP1LQ68CZ1 1315 aa25.65■■□□□ 1.7
VSTM1-201ENST00000338372 MST1RQ04912 1400 aa25.65■■□□□ 1.7
VSTM1-201ENST00000338372 PRAG1Q86YV5 1406 aa25.65■■□□□ 1.7
VSTM1-201ENST00000338372 ATF3P18847 181 aa25.65■■□□□ 1.7
VSTM1-201ENST00000338372 C14orf37Q86TY3 774 aa25.65■■□□□ 1.7
VSTM1-201ENST00000338372 JCADQ9P266 1359 aa25.65■■□□□ 1.7
VSTM1-201ENST00000338372 VGFO15240 615 aaPredicted RBP25.64■■□□□ 1.7
VSTM1-201ENST00000338372 BRINP3Q76B58 766 aa25.64■■□□□ 1.7
VSTM1-201ENST00000338372 IFT172Q9UG01 1749 aa25.63■■□□□ 1.69
VSTM1-201ENST00000338372 SPATA31E1Q6ZUB1 1445 aa25.63■■□□□ 1.69
VSTM1-201ENST00000338372 ADGRL3Q9HAR2 1447 aa25.63■■□□□ 1.69
VSTM1-201ENST00000338372 POTEAQ6S8J7 498 aa25.62■■□□□ 1.69
VSTM1-201ENST00000338372 SHPRHQ149N8 1683 aa25.61■■□□□ 1.69
VSTM1-201ENST00000338372 MPHOSPH9Q99550 1183 aa25.61■■□□□ 1.69
VSTM1-201ENST00000338372 NHSL1Q5SYE7 1610 aa25.6■■□□□ 1.69
VSTM1-201ENST00000338372 LRP6O75581 1613 aa25.59■■□□□ 1.69
VSTM1-201ENST00000338372 ROBO2Q9HCK4 1378 aa25.59■■□□□ 1.69
VSTM1-201ENST00000338372 ASXL1Q8IXJ9 1541 aa25.59■■□□□ 1.69
VSTM1-201ENST00000338372 PTCH1Q13635 1447 aa25.59■■□□□ 1.69
VSTM1-201ENST00000338372 ADGRF5Q8IZF2 1346 aa25.55■■□□□ 1.68
VSTM1-201ENST00000338372 LAMC1P11047 1609 aa25.53■■□□□ 1.68
VSTM1-201ENST00000338372 CCDC144AA2RUR9 1427 aa25.53■■□□□ 1.68
VSTM1-201ENST00000338372 SETD5Q9C0A6 1442 aa25.53■■□□□ 1.68
VSTM1-201ENST00000338372 SPATA31A6Q5VVP1 1343 aa25.52■■□□□ 1.68
VSTM1-201ENST00000338372 C1orf167Q5SNV9 1468 aa25.5■■□□□ 1.67
VSTM1-201ENST00000338372 RGL3Q3MIN7 710 aa25.47■■□□□ 1.67
VSTM1-201ENST00000338372 DDX17Q92841 729 aaKnown RBP25.47■■□□□ 1.67
VSTM1-201ENST00000338372 ANKRD30BQ9BXX2 1392 aa25.45■■□□□ 1.67
VSTM1-201ENST00000338372 TECPR2O15040 1411 aa25.45■■□□□ 1.66
VSTM1-201ENST00000338372 PIK3C2GO75747 1445 aa25.45■■□□□ 1.66
VSTM1-201ENST00000338372 KNDC1Q76NI1 1749 aa25.43■■□□□ 1.66
VSTM1-201ENST00000338372 RAB3GAP2Q9H2M9 1393 aa25.43■■□□□ 1.66
VSTM1-201ENST00000338372 ACIN1Q9UKV3 1341 aaKnown RBP25.42■■□□□ 1.66
VSTM1-201ENST00000338372 NRXN1Q9ULB1 1477 aa25.41■■□□□ 1.66
VSTM1-201ENST00000338372 ORAI2Q96SN7 254 aa25.41■■□□□ 1.66
VSTM1-201ENST00000338372 LRRC59Q96AG4 307 aaKnown RBP25.4■■□□□ 1.66
VSTM1-201ENST00000338372 LRPPRCP42704 1394 aaKnown RBP25.4■■□□□ 1.66
VSTM1-201ENST00000338372 CDC42BPGQ6DT37 1551 aa25.39■■□□□ 1.66
VSTM1-201ENST00000338372 PNPLA6Q8IY17 1366 aa25.39■■□□□ 1.65
VSTM1-201ENST00000338372 ABCC11Q96J66 1382 aa25.39■■□□□ 1.65
VSTM1-201ENST00000338372 SOS2Q07890 1332 aaPredicted RBP25.38■■□□□ 1.65
VSTM1-201ENST00000338372 TMEM132EQ6IEE7 984 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms