RNA–Protein interactions for RNA: ENST00000334000.7

C5orf38-201, Transcript of chromosome 5 open reading frame 38, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C5orf38, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C5orf38-201ENST00000334000 SENP3Q9H4L4 574 aaPredicted RBP32.66■■■□□ 2.82
C5orf38-201ENST00000334000 NUP155O75694 1391 aa32.66■■■□□ 2.82
C5orf38-201ENST00000334000 RRBP1Q9P2E9 1410 aaKnown RBP32.66■■■□□ 2.82
C5orf38-201ENST00000334000 RIMS2Q9UQ26 1411 aa32.6■■■□□ 2.81
C5orf38-201ENST00000334000 CHGAP10645 457 aaKnown RBP32.56■■■□□ 2.8
C5orf38-201ENST00000334000 KCNA6P17658 529 aa32.56■■■□□ 2.8
C5orf38-201ENST00000334000 NWD1Q149M9 1564 aa32.56■■■□□ 2.8
C5orf38-201ENST00000334000 RBM33Q96EV2 1170 aaKnown RBP32.55■■■□□ 2.8
C5orf38-201ENST00000334000 TMEM94Q12767 1356 aa32.54■■■□□ 2.8
C5orf38-201ENST00000334000 PLEKHG1Q9ULL1 1385 aa32.54■■■□□ 2.8
C5orf38-201ENST00000334000 NUTM2DQ5VT03 806 aaPredicted RBP32.52■■■□□ 2.8
C5orf38-201ENST00000334000 BCANQ96GW7 911 aa32.51■■■□□ 2.79
C5orf38-201ENST00000334000 NAIPQ13075 1403 aa32.51■■■□□ 2.79
C5orf38-201ENST00000334000 MED1Q15648 1581 aaPredicted RBP32.49■■■□□ 2.79
C5orf38-201ENST00000334000 CHD2O14647 1828 aaKnown RBP32.49■■■□□ 2.79
C5orf38-201ENST00000334000 SPHKAPQ2M3C7 1700 aa32.49■■■□□ 2.79
C5orf38-201ENST00000334000 PPP1R15AO75807 674 aaPredicted RBP32.48■■■□□ 2.79
C5orf38-201ENST00000334000 PROSER2Q86WR7 435 aaPredicted RBP32.47■■■□□ 2.79
C5orf38-201ENST00000334000 NKTRP30414 1462 aaKnown RBP32.46■■■□□ 2.79
C5orf38-201ENST00000334000 ADAMTS13Q76LX8 1427 aa32.45■■■□□ 2.79
C5orf38-201ENST00000334000 HDGFP51858 240 aaKnown RBP32.41■■■□□ 2.78
C5orf38-201ENST00000334000 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.4■■■□□ 2.78
C5orf38-201ENST00000334000 TBX22Q9Y458 520 aa32.39■■■□□ 2.78
C5orf38-201ENST00000334000 CLTCL1P53675 1640 aa32.37■■■□□ 2.77
C5orf38-201ENST00000334000 HFM1A2PYH4 1435 aa32.34■■■□□ 2.77
C5orf38-201ENST00000334000 FAM135BQ49AJ0 1406 aa32.34■■■□□ 2.77
C5orf38-201ENST00000334000 NRXN3Q9Y4C0 1643 aa32.34■■■□□ 2.77
C5orf38-201ENST00000334000 ROBO1Q9Y6N7 1651 aa32.34■■■□□ 2.77
C5orf38-201ENST00000334000 DIP2AQ14689 1571 aa32.33■■■□□ 2.77
C5orf38-201ENST00000334000 SOCS7O14512 581 aa32.33■■■□□ 2.77
C5orf38-201ENST00000334000 TRPM2O94759 1503 aa32.31■■■□□ 2.76
C5orf38-201ENST00000334000 PTPRUQ92729 1446 aa32.31■■■□□ 2.76
C5orf38-201ENST00000334000 MSH6P52701 1360 aa32.28■■■□□ 2.76
C5orf38-201ENST00000334000 TRIM52Q96A61 297 aa32.25■■■□□ 2.75
C5orf38-201ENST00000334000 NEXMIFQ5QGS0 1516 aa32.25■■■□□ 2.75
C5orf38-201ENST00000334000 SETBP1Q9Y6X0 1596 aa32.24■■■□□ 2.75
C5orf38-201ENST00000334000 PIK3R4Q99570 1358 aa32.24■■■□□ 2.75
C5orf38-201ENST00000334000 ZNF326Q5BKZ1 582 aaKnown RBP32.24■■■□□ 2.75
C5orf38-201ENST00000334000 KIF1BO60333 1816 aa32.23■■■□□ 2.75
C5orf38-201ENST00000334000 AMOTL2Q9Y2J4 779 aa32.2■■■□□ 2.75
C5orf38-201ENST00000334000 XRN1Q8IZH2 1706 aaKnown RBP32.2■■■□□ 2.74
C5orf38-201ENST00000334000 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.2■■■□□ 2.74
C5orf38-201ENST00000334000 SLAIN2Q9P270 581 aa32.19■■■□□ 2.74
C5orf38-201ENST00000334000 NCOA3Q9Y6Q9 1424 aa32.17■■■□□ 2.74
C5orf38-201ENST00000334000 METP08581 1390 aa32.17■■■□□ 2.74
C5orf38-201ENST00000334000 SLC4A1APQ9BWU0 796 aaKnown RBP32.16■■■□□ 2.74
C5orf38-201ENST00000334000 FOXD1Q16676 465 aa32.13■■■□□ 2.73
C5orf38-201ENST00000334000 PHF23Q9BUL5 403 aaPredicted RBP32.13■■■□□ 2.73
C5orf38-201ENST00000334000 PHLPP1O60346 1717 aa32.12■■■□□ 2.73
C5orf38-201ENST00000334000 C14orf37Q86TY3 774 aa32.12■■■□□ 2.73
C5orf38-201ENST00000334000 RGS17Q9UGC6 210 aaPredicted RBP32.09■■■□□ 2.73
C5orf38-201ENST00000334000 C19orf44Q9H6X5 657 aa32.08■■■□□ 2.73
C5orf38-201ENST00000334000 SETD1AO15047 1707 aaKnown RBP32.08■■■□□ 2.73
C5orf38-201ENST00000334000 COL16A1Q07092 1604 aaPredicted RBP32.06■■■□□ 2.72
C5orf38-201ENST00000334000 PPLO60437 1756 aa32.04■■■□□ 2.72
C5orf38-201ENST00000334000 CADPS2Q86UW7 1296 aa32.03■■■□□ 2.72
C5orf38-201ENST00000334000 ATF3P18847 181 aa32.01■■■□□ 2.71
C5orf38-201ENST00000334000 NALCNQ8IZF0 1738 aa31.98■■■□□ 2.71
C5orf38-201ENST00000334000 AHDC1Q5TGY3 1603 aaPredicted RBP31.97■■■□□ 2.71
C5orf38-201ENST00000334000 MPHOSPH9Q99550 1183 aa31.97■■■□□ 2.71
C5orf38-201ENST00000334000 DCCP43146 1447 aa31.96■■■□□ 2.71
C5orf38-201ENST00000334000 VGFO15240 615 aaPredicted RBP31.95■■■□□ 2.71
C5orf38-201ENST00000334000 BRINP3Q76B58 766 aa31.95■■■□□ 2.71
C5orf38-201ENST00000334000 JCADQ9P266 1359 aa31.94■■■□□ 2.7
C5orf38-201ENST00000334000 MST1RQ04912 1400 aa31.94■■■□□ 2.7
C5orf38-201ENST00000334000 RPGRIP1LQ68CZ1 1315 aa31.94■■■□□ 2.7
C5orf38-201ENST00000334000 ADGRL3Q9HAR2 1447 aa31.92■■■□□ 2.7
C5orf38-201ENST00000334000 SPATA31E1Q6ZUB1 1445 aa31.91■■■□□ 2.7
C5orf38-201ENST00000334000 ROBO2Q9HCK4 1378 aa31.9■■■□□ 2.7
C5orf38-201ENST00000334000 CCDC144AA2RUR9 1427 aa31.9■■■□□ 2.7
C5orf38-201ENST00000334000 ASXL1Q8IXJ9 1541 aa31.9■■■□□ 2.7
C5orf38-201ENST00000334000 POTEAQ6S8J7 498 aa31.89■■■□□ 2.7
C5orf38-201ENST00000334000 IFT172Q9UG01 1749 aa31.89■■■□□ 2.69
C5orf38-201ENST00000334000 LRP6O75581 1613 aa31.88■■■□□ 2.69
C5orf38-201ENST00000334000 PTCH1Q13635 1447 aa31.87■■■□□ 2.69
C5orf38-201ENST00000334000 SETD5Q9C0A6 1442 aa31.87■■■□□ 2.69
C5orf38-201ENST00000334000 ADGRF5Q8IZF2 1346 aa31.87■■■□□ 2.69
C5orf38-201ENST00000334000 RGL3Q3MIN7 710 aa31.86■■■□□ 2.69
C5orf38-201ENST00000334000 ACIN1Q9UKV3 1341 aaKnown RBP31.85■■■□□ 2.69
C5orf38-201ENST00000334000 NHSL1Q5SYE7 1610 aa31.85■■■□□ 2.69
C5orf38-201ENST00000334000 SHPRHQ149N8 1683 aa31.84■■■□□ 2.69
C5orf38-201ENST00000334000 PRAG1Q86YV5 1406 aa31.83■■■□□ 2.69
C5orf38-201ENST00000334000 DDX17Q92841 729 aaKnown RBP31.81■■■□□ 2.68
C5orf38-201ENST00000334000 RAB3GAP2Q9H2M9 1393 aa31.79■■■□□ 2.68
C5orf38-201ENST00000334000 C1orf167Q5SNV9 1468 aa31.77■■■□□ 2.68
C5orf38-201ENST00000334000 SPATA31A6Q5VVP1 1343 aa31.75■■■□□ 2.67
C5orf38-201ENST00000334000 ANKRD30BQ9BXX2 1392 aa31.73■■■□□ 2.67
C5orf38-201ENST00000334000 PIK3C2GO75747 1445 aa31.71■■■□□ 2.67
C5orf38-201ENST00000334000 TMEM132EQ6IEE7 984 aa31.69■■■□□ 2.66
C5orf38-201ENST00000334000 ORAI2Q96SN7 254 aa31.69■■■□□ 2.66
C5orf38-201ENST00000334000 STK26Q9P289 416 aa31.68■■■□□ 2.66
C5orf38-201ENST00000334000 LAMC1P11047 1609 aa31.67■■■□□ 2.66
C5orf38-201ENST00000334000 TECPR2O15040 1411 aa31.66■■■□□ 2.66
C5orf38-201ENST00000334000 NUTM2BA6NNL0 878 aaPredicted RBP31.66■■■□□ 2.66
C5orf38-201ENST00000334000 NUTM2EB1AL46 878 aaPredicted RBP31.66■■■□□ 2.66
C5orf38-201ENST00000334000 NUTM2AQ8IVF1 878 aaPredicted RBP31.66■■■□□ 2.66
C5orf38-201ENST00000334000 LRPPRCP42704 1394 aaKnown RBP31.66■■■□□ 2.66
C5orf38-201ENST00000334000 WAPLQ7Z5K2 1190 aa31.65■■■□□ 2.66
C5orf38-201ENST00000334000 KNDC1Q76NI1 1749 aa31.65■■■□□ 2.66
C5orf38-201ENST00000334000 PLEKHH1Q9ULM0 1364 aa31.65■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms