RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 ENOX2Q16206 610 aaKnown RBP19.95■□□□□ 0.78
PTCH1-201ENST00000331920 ELL2O00472 640 aaPredicted RBP19.94■□□□□ 0.78
PTCH1-201ENST00000331920 SEPT7Q16181 437 aaKnown RBP19.94■□□□□ 0.78
PTCH1-201ENST00000331920 FOXD1Q16676 465 aa19.93■□□□□ 0.78
PTCH1-201ENST00000331920 RRP7AQ9Y3A4 280 aaKnown RBP19.93■□□□□ 0.78
PTCH1-201ENST00000331920 CENPJQ9HC77 1338 aaPredicted RBP19.93■□□□□ 0.78
PTCH1-201ENST00000331920 WWC2Q6AWC2 1192 aa19.93■□□□□ 0.78
PTCH1-201ENST00000331920 TRDNQ13061 729 aa19.92■□□□□ 0.78
PTCH1-201ENST00000331920 MYO6Q9UM54 1294 aa19.92■□□□□ 0.78
PTCH1-201ENST00000331920 IKQ13123 557 aaPredicted RBP19.92■□□□□ 0.78
PTCH1-201ENST00000331920 BCL2L13Q9BXK5 485 aa19.92■□□□□ 0.78
PTCH1-201ENST00000331920 SKOR2Q2VWA4 1001 aaPredicted RBP19.92■□□□□ 0.78
PTCH1-201ENST00000331920 CWC15Q9P013 229 aaKnown RBP19.92■□□□□ 0.78
PTCH1-201ENST00000331920 VPS37CA5D8V6 355 aaPredicted RBP19.91■□□□□ 0.78
PTCH1-201ENST00000331920 AXDND1Q5T1B0 1012 aaPredicted RBP19.9■□□□□ 0.78
PTCH1-201ENST00000331920 GSE1Q14687 1217 aa19.9■□□□□ 0.78
PTCH1-201ENST00000331920 LRRFIP1Q32MZ4 808 aaKnown RBP19.89■□□□□ 0.77
PTCH1-201ENST00000331920 EIF2S2P20042 333 aaKnown RBP19.89■□□□□ 0.77
PTCH1-201ENST00000331920 C1orf141Q5JVX7 400 aa19.89■□□□□ 0.77
PTCH1-201ENST00000331920 CHMP4CQ96CF2 233 aa19.89■□□□□ 0.77
PTCH1-201ENST00000331920 C9orf78Q9NZ63 289 aaPredicted RBP19.89■□□□□ 0.77
PTCH1-201ENST00000331920 PPM1FP49593 454 aaPredicted RBP19.88■□□□□ 0.77
PTCH1-201ENST00000331920 HSPA5P11021 654 aaKnown RBP19.88■□□□□ 0.77
PTCH1-201ENST00000331920 BRPF1P55201 1214 aaPredicted RBP19.88■□□□□ 0.77
PTCH1-201ENST00000331920 CCDC27Q2M243 656 aa19.87■□□□□ 0.77
PTCH1-201ENST00000331920 PHF23Q9BUL5 403 aaPredicted RBP19.87■□□□□ 0.77
PTCH1-201ENST00000331920 MEX3CQ5U5Q3 659 aaKnown RBP19.87■□□□□ 0.77
PTCH1-201ENST00000331920 OLFM4Q6UX06 510 aa19.87■□□□□ 0.77
PTCH1-201ENST00000331920 ZKSCAN1P17029 563 aaPredicted RBP19.85■□□□□ 0.77
PTCH1-201ENST00000331920 SYCP1Q15431 976 aa19.85■□□□□ 0.77
PTCH1-201ENST00000331920 CCAR1Q8IX12 1150 aaKnown RBP19.85■□□□□ 0.77
PTCH1-201ENST00000331920 EIF4G1Q04637 1599 aaKnown RBP19.85■□□□□ 0.77
PTCH1-201ENST00000331920 CENPHQ9H3R5 247 aa19.84■□□□□ 0.77
PTCH1-201ENST00000331920 CLASRPQ8N2M8 674 aaKnown RBP19.84■□□□□ 0.77
PTCH1-201ENST00000331920 SAFBQ15424 915 aaKnown RBP eCLIP19.84■□□□□ 0.77
PTCH1-201ENST00000331920 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.84■□□□□ 0.77
PTCH1-201ENST00000331920 STK11IPQ8N1F8 1099 aa19.83■□□□□ 0.77
PTCH1-201ENST00000331920 IFIT2P09913 472 aaKnown RBP19.83■□□□□ 0.77
PTCH1-201ENST00000331920 NEXNQ0ZGT2 675 aa19.83■□□□□ 0.77
PTCH1-201ENST00000331920 MAPK8IP2Q13387 824 aaPredicted RBP19.83■□□□□ 0.77
PTCH1-201ENST00000331920 CGNL1Q0VF96 1302 aa19.83■□□□□ 0.76
PTCH1-201ENST00000331920 LEKR1Q6ZMV7 388 aa19.83■□□□□ 0.76
PTCH1-201ENST00000331920 RUFY2Q8WXA3 655 aa19.83■□□□□ 0.76
PTCH1-201ENST00000331920 CT47B1P0C2W7 299 aaPredicted RBP19.82■□□□□ 0.76
PTCH1-201ENST00000331920 LMOD3Q0VAK6 560 aa19.82■□□□□ 0.76
PTCH1-201ENST00000331920 TAX1BP1Q86VP1 789 aa19.82■□□□□ 0.76
PTCH1-201ENST00000331920 RBM33Q96EV2 1170 aaKnown RBP19.82■□□□□ 0.76
PTCH1-201ENST00000331920 CCNB3Q8WWL7 1395 aa19.81■□□□□ 0.76
PTCH1-201ENST00000331920 DYDC1Q8WWB3 177 aa19.81■□□□□ 0.76
PTCH1-201ENST00000331920 FAM43AQ8N2R8 423 aa19.81■□□□□ 0.76
PTCH1-201ENST00000331920 IBSPP21815 317 aaPredicted RBP19.8■□□□□ 0.76
PTCH1-201ENST00000331920 TTC5Q8N0Z6 440 aa19.8■□□□□ 0.76
PTCH1-201ENST00000331920 ERCC4Q92889 916 aaPredicted RBP19.8■□□□□ 0.76
PTCH1-201ENST00000331920 SMC3Q9UQE7 1217 aa19.8■□□□□ 0.76
PTCH1-201ENST00000331920 PLIN1O60240 522 aa19.8■□□□□ 0.76
PTCH1-201ENST00000331920 SMC2O95347 1197 aa19.79■□□□□ 0.76
PTCH1-201ENST00000331920 CCDC73Q6ZRK6 1079 aa19.79■□□□□ 0.76
PTCH1-201ENST00000331920 BRMS1Q9HCU9 246 aa19.78■□□□□ 0.76
PTCH1-201ENST00000331920 TERF2IPQ9NYB0 399 aa19.78■□□□□ 0.76
PTCH1-201ENST00000331920 GOLGA6L10A6NI86 522 aa19.78■□□□□ 0.76
PTCH1-201ENST00000331920 NAT10Q9H0A0 1025 aaKnown RBP19.77■□□□□ 0.76
PTCH1-201ENST00000331920 ANKRD18AQ8IVF6 992 aa19.77■□□□□ 0.76
PTCH1-201ENST00000331920 ERLIN2O94905 339 aa19.76■□□□□ 0.75
PTCH1-201ENST00000331920 CDK5RAP3Q96JB5 506 aa19.76■□□□□ 0.75
PTCH1-201ENST00000331920 RALBP1Q15311 655 aa19.76■□□□□ 0.75
PTCH1-201ENST00000331920 HMGN5P82970 282 aaKnown RBP19.76■□□□□ 0.75
PTCH1-201ENST00000331920 RNF20Q5VTR2 975 aa19.76■□□□□ 0.75
PTCH1-201ENST00000331920 FAM193AP78312 1265 aa19.75■□□□□ 0.75
PTCH1-201ENST00000331920 NF2P35240 595 aa19.75■□□□□ 0.75
PTCH1-201ENST00000331920 MAGEC2Q9UBF1 373 aaPredicted RBP19.75■□□□□ 0.75
PTCH1-201ENST00000331920 KIAA0754O94854 1291 aa19.75■□□□□ 0.75
PTCH1-201ENST00000331920 CEP162Q5TB80 1403 aa19.75■□□□□ 0.75
PTCH1-201ENST00000331920 CCER2I3L3R5 266 aa19.74■□□□□ 0.75
PTCH1-201ENST00000331920 FMNL2Q96PY5 1086 aa19.74■□□□□ 0.75
PTCH1-201ENST00000331920 FAM161AQ3B820 660 aa19.74■□□□□ 0.75
PTCH1-201ENST00000331920 REC8O95072 547 aa19.73■□□□□ 0.75
PTCH1-201ENST00000331920 ATP2B1P20020 1258 aa19.73■□□□□ 0.75
PTCH1-201ENST00000331920 TEFQ10587 303 aa19.73■□□□□ 0.75
PTCH1-201ENST00000331920 EID1Q9Y6B2 187 aa19.73■□□□□ 0.75
PTCH1-201ENST00000331920 EIF3AQ14152 1382 aaKnown RBP19.73■□□□□ 0.75
PTCH1-201ENST00000331920 WASHC4Q2M389 1173 aa19.73■□□□□ 0.75
PTCH1-201ENST00000331920 KRT18P05783 430 aaKnown RBP19.73■□□□□ 0.75
PTCH1-201ENST00000331920 RALYLQ86SE5 291 aaKnown RBP19.72■□□□□ 0.75
PTCH1-201ENST00000331920 PDCL3Q9H2J4 239 aa19.72■□□□□ 0.75
PTCH1-201ENST00000331920 GBP2P32456 591 aaPredicted RBP19.72■□□□□ 0.75
PTCH1-201ENST00000331920 TSHZ2Q9NRE2 1034 aa19.72■□□□□ 0.75
PTCH1-201ENST00000331920 RNF214Q8ND24 703 aa19.72■□□□□ 0.75
PTCH1-201ENST00000331920 SDF4Q9BRK5 362 aa19.72■□□□□ 0.75
PTCH1-201ENST00000331920 GOLGA3Q08378 1498 aa19.72■□□□□ 0.75
PTCH1-201ENST00000331920 PPP1R1BQ9UD71 204 aaPredicted RBP19.71■□□□□ 0.75
PTCH1-201ENST00000331920 CCDC66A2RUB6 948 aa19.71■□□□□ 0.75
PTCH1-201ENST00000331920 PKD2Q13563 968 aa19.71■□□□□ 0.75
PTCH1-201ENST00000331920 EZRP15311 586 aaKnown RBP19.71■□□□□ 0.75
PTCH1-201ENST00000331920 GOLGA6L7A0A1B0GV03 622 aa19.71■□□□□ 0.75
PTCH1-201ENST00000331920 SMARCE1Q969G3 411 aa19.71■□□□□ 0.75
PTCH1-201ENST00000331920 NEUROD6Q96NK8 337 aa19.71■□□□□ 0.75
PTCH1-201ENST00000331920 RBM10P98175 930 aaKnown RBP19.7■□□□□ 0.74
PTCH1-201ENST00000331920 NEBLO76041 1014 aa19.7■□□□□ 0.74
PTCH1-201ENST00000331920 SPC24Q8NBT2 197 aa19.7■□□□□ 0.74
PTCH1-201ENST00000331920 ZHX3Q9H4I2 956 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms