RNA–Protein interactions for RNA: ENST00000315127.8

EDC3-201, Transcript of enhancer of mRNA decapping 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC3, Length 3,763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-201ENST00000315127 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.35■□□□□ 0.53
EDC3-201ENST00000315127 GOLGA2Q08379 1002 aa18.35■□□□□ 0.53
EDC3-201ENST00000315127 ANP32AP39687 249 aaKnown RBP18.35■□□□□ 0.53
EDC3-201ENST00000315127 TERF2IPQ9NYB0 399 aa18.35■□□□□ 0.53
EDC3-201ENST00000315127 ITSN2Q9NZM3 1697 aa18.35■□□□□ 0.53
EDC3-201ENST00000315127 A0A0G2JS52 829 aa18.34■□□□□ 0.53
EDC3-201ENST00000315127 HDGFP51858 240 aaKnown RBP18.34■□□□□ 0.53
EDC3-201ENST00000315127 CABP1Q9NZU7 370 aa18.34■□□□□ 0.53
EDC3-201ENST00000315127 HMOX1P09601 288 aa18.33■□□□□ 0.52
EDC3-201ENST00000315127 NGDNQ8NEJ9 315 aaKnown RBP18.33■□□□□ 0.52
EDC3-201ENST00000315127 NOS1P29475 1434 aa18.33■□□□□ 0.52
EDC3-201ENST00000315127 EID1Q9Y6B2 187 aa18.33■□□□□ 0.52
EDC3-201ENST00000315127 PMFBP1Q8TBY8 1022 aa18.32■□□□□ 0.52
EDC3-201ENST00000315127 DENND4BO75064 1496 aaPredicted RBP18.31■□□□□ 0.52
EDC3-201ENST00000315127 TESK2Q96S53 571 aa18.31■□□□□ 0.52
EDC3-201ENST00000315127 KDM5BQ9UGL1 1544 aa18.31■□□□□ 0.52
EDC3-201ENST00000315127 FTSJ3Q8IY81 847 aaKnown RBP18.31■□□□□ 0.52
EDC3-201ENST00000315127 TTC37Q6PGP7 1564 aa18.31■□□□□ 0.52
EDC3-201ENST00000315127 CGNL1Q0VF96 1302 aa18.3■□□□□ 0.52
EDC3-201ENST00000315127 ARHGEF12Q9NZN5 1544 aa18.3■□□□□ 0.52
EDC3-201ENST00000315127 TEX14Q8IWB6 1497 aa18.29■□□□□ 0.52
EDC3-201ENST00000315127 SKAP1Q86WV1 359 aa18.29■□□□□ 0.52
EDC3-201ENST00000315127 ZBTB47Q9UFB7 747 aaPredicted RBP18.28■□□□□ 0.52
EDC3-201ENST00000315127 CDK19Q9BWU1 502 aa18.27■□□□□ 0.51
EDC3-201ENST00000315127 SLC52A1Q9NWF4 448 aa18.27■□□□□ 0.51
EDC3-201ENST00000315127 CRBNQ96SW2 442 aa18.26■□□□□ 0.51
EDC3-201ENST00000315127 SAMD9LQ8IVG5 1584 aa18.25■□□□□ 0.51
EDC3-201ENST00000315127 PRAG1Q86YV5 1406 aa18.25■□□□□ 0.51
EDC3-201ENST00000315127 RRP1P56182 461 aaKnown RBP18.24■□□□□ 0.51
EDC3-201ENST00000315127 A2MP01023 1474 aa18.23■□□□□ 0.51
EDC3-201ENST00000315127 ADGRL2O95490 1459 aa18.23■□□□□ 0.51
EDC3-201ENST00000315127 NCKAP5LQ9HCH0 1330 aa18.22■□□□□ 0.51
EDC3-201ENST00000315127 COG6Q9Y2V7 657 aa18.22■□□□□ 0.51
EDC3-201ENST00000315127 DUOX2Q9NRD8 1548 aa18.22■□□□□ 0.51
EDC3-201ENST00000315127 BRD4O60885 1362 aaPredicted RBP18.21■□□□□ 0.51
EDC3-201ENST00000315127 TCP11L2Q8N4U5 519 aa18.21■□□□□ 0.51
EDC3-201ENST00000315127 APBB1O00213 710 aa18.2■□□□□ 0.5
EDC3-201ENST00000315127 RTL5Q5HYW3 569 aaPredicted RBP18.2■□□□□ 0.5
EDC3-201ENST00000315127 RRS1Q15050 365 aaKnown RBP18.2■□□□□ 0.5
EDC3-201ENST00000315127 HAP1P54257 671 aaPredicted RBP18.19■□□□□ 0.5
EDC3-201ENST00000315127 BCAR3O75815 825 aa18.18■□□□□ 0.5
EDC3-201ENST00000315127 SHANK2Q9UPX8 1470 aa18.18■□□□□ 0.5
EDC3-201ENST00000315127 TSR2Q969E8 191 aaKnown RBP18.17■□□□□ 0.5
EDC3-201ENST00000315127 SMC4Q9NTJ3 1288 aa18.17■□□□□ 0.5
EDC3-201ENST00000315127 UGGT1Q9NYU2 1555 aa18.17■□□□□ 0.5
EDC3-201ENST00000315127 COG3Q96JB2 828 aa18.17■□□□□ 0.5
EDC3-201ENST00000315127 STAC3Q96MF2 364 aa18.17■□□□□ 0.5
EDC3-201ENST00000315127 XPCQ01831 940 aaPredicted RBP18.17■□□□□ 0.5
EDC3-201ENST00000315127 CARD14Q9BXL6 1004 aa18.17■□□□□ 0.5
EDC3-201ENST00000315127 C14orf93Q9H972 538 aaKnown RBP18.17■□□□□ 0.5
EDC3-201ENST00000315127 NSD3Q9BZ95 1437 aa18.17■□□□□ 0.5
EDC3-201ENST00000315127 YEATS2Q9ULM3 1422 aa18.17■□□□□ 0.5
EDC3-201ENST00000315127 AMPHP49418 695 aa18.16■□□□□ 0.5
EDC3-201ENST00000315127 ZNF518AQ6AHZ1 1483 aa18.16■□□□□ 0.5
EDC3-201ENST00000315127 PER1O15534 1290 aaPredicted RBP18.16■□□□□ 0.5
EDC3-201ENST00000315127 RIPK4P57078 832 aa18.15■□□□□ 0.5
EDC3-201ENST00000315127 CDC42BPAQ5VT25 1732 aa18.15■□□□□ 0.5
EDC3-201ENST00000315127 PANK1Q8TE04 598 aa18.15■□□□□ 0.5
EDC3-201ENST00000315127 RALGAPBQ86X10 1494 aa18.15■□□□□ 0.5
EDC3-201ENST00000315127 GCC2Q8IWJ2 1684 aa18.15■□□□□ 0.5
EDC3-201ENST00000315127 DIAPH1O60610 1272 aaKnown RBP18.14■□□□□ 0.5
EDC3-201ENST00000315127 C20orf194Q5TEA3 1177 aa18.14■□□□□ 0.49
EDC3-201ENST00000315127 ITPRIPQ8IWB1 547 aa18.14■□□□□ 0.49
EDC3-201ENST00000315127 NECTIN2Q92692 538 aa18.14■□□□□ 0.49
EDC3-201ENST00000315127 THUMPD2Q9BTF0 503 aaKnown RBP18.14■□□□□ 0.49
EDC3-201ENST00000315127 PDE3BQ13370 1112 aa18.13■□□□□ 0.49
EDC3-201ENST00000315127 PLA2R1Q13018 1463 aa18.13■□□□□ 0.49
EDC3-201ENST00000315127 AMER1Q5JTC6 1135 aaPredicted RBP18.13■□□□□ 0.49
EDC3-201ENST00000315127 ARXQ96QS3 562 aa18.13■□□□□ 0.49
EDC3-201ENST00000315127 ZRANB1Q9UGI0 708 aa18.12■□□□□ 0.49
EDC3-201ENST00000315127 NME9Q86XW9 330 aa18.11■□□□□ 0.49
EDC3-201ENST00000315127 ZCCHC11Q5TAX3 1644 aaKnown RBP18.11■□□□□ 0.49
EDC3-201ENST00000315127 SPATA31E1Q6ZUB1 1445 aa18.1■□□□□ 0.49
EDC3-201ENST00000315127 ATP7AQ04656 1500 aa18.1■□□□□ 0.49
EDC3-201ENST00000315127 PRKAR2BP31323 418 aa18.09■□□□□ 0.49
EDC3-201ENST00000315127 ZNF428Q96B54 188 aa18.09■□□□□ 0.49
EDC3-201ENST00000315127 SCAF11Q99590 1463 aaKnown RBP18.09■□□□□ 0.49
EDC3-201ENST00000315127 NLRP6P59044 892 aa18.08■□□□□ 0.48
EDC3-201ENST00000315127 RUNDC1Q96C34 613 aa18.08■□□□□ 0.48
EDC3-201ENST00000315127 EMILIN1Q9Y6C2 1016 aa18.08■□□□□ 0.48
EDC3-201ENST00000315127 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.07■□□□□ 0.48
EDC3-201ENST00000315127 NUDT16Q96DE0 195 aaKnown RBP18.07■□□□□ 0.48
EDC3-201ENST00000315127 E9PSI1 815 aa18.06■□□□□ 0.48
EDC3-201ENST00000315127 RTF1Q92541 710 aaKnown RBP18.06■□□□□ 0.48
EDC3-201ENST00000315127 MYH16Q9H6N6 1097 aa18.06■□□□□ 0.48
EDC3-201ENST00000315127 RPGRIP1LQ68CZ1 1315 aa18.05■□□□□ 0.48
EDC3-201ENST00000315127 MYO5CQ9NQX4 1742 aa18.05■□□□□ 0.48
EDC3-201ENST00000315127 SLC4A10Q6U841 1118 aa18.05■□□□□ 0.48
EDC3-201ENST00000315127 NPATQ14207 1427 aa18.04■□□□□ 0.48
EDC3-201ENST00000315127 DCTN1Q14203 1278 aa18.04■□□□□ 0.48
EDC3-201ENST00000315127 SLC4A3P48751 1232 aa18.04■□□□□ 0.48
EDC3-201ENST00000315127 SPRYD3Q8NCJ5 442 aa18.04■□□□□ 0.48
EDC3-201ENST00000315127 RTEL1-TNFRSF6BF6WH68 1400 aa18.04■□□□□ 0.48
EDC3-201ENST00000315127 ESCO1Q5FWF5 840 aa18.02■□□□□ 0.48
EDC3-201ENST00000315127 CSB-PGBD3P0DP91 1061 aa18.02■□□□□ 0.48
EDC3-201ENST00000315127 EXOSC9Q06265 439 aaKnown RBP18.02■□□□□ 0.47
EDC3-201ENST00000315127 PSME1Q06323 249 aa18.02■□□□□ 0.47
EDC3-201ENST00000315127 PREX2Q70Z35 1606 aa18.01■□□□□ 0.47
EDC3-201ENST00000315127 AMOTL2Q9Y2J4 779 aa18.01■□□□□ 0.47
EDC3-201ENST00000315127 ATP10AO60312 1499 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms