RNA–Protein interactions for RNA: ENST00000299572.9

CENPN-201, Transcript of centromere protein N, humanhuman

TSL 1 (best) BASIC

Gene CENPN, Length 1,398 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPN-201ENST00000299572 NUP155O75694 1391 aa31.1■■■□□ 2.57
CENPN-201ENST00000299572 RIMS2Q9UQ26 1411 aa31.08■■■□□ 2.57
CENPN-201ENST00000299572 KCNA6P17658 529 aa31.07■■■□□ 2.56
CENPN-201ENST00000299572 NWD1Q149M9 1564 aa31.07■■■□□ 2.56
CENPN-201ENST00000299572 MED1Q15648 1581 aaPredicted RBP31.07■■■□□ 2.56
CENPN-201ENST00000299572 BCANQ96GW7 911 aa31.06■■■□□ 2.56
CENPN-201ENST00000299572 PLEKHG1Q9ULL1 1385 aa31.05■■■□□ 2.56
CENPN-201ENST00000299572 PPP1R15AO75807 674 aaPredicted RBP31.05■■■□□ 2.56
CENPN-201ENST00000299572 HDGFP51858 240 aaKnown RBP31.05■■■□□ 2.56
CENPN-201ENST00000299572 NKTRP30414 1462 aaKnown RBP31.04■■■□□ 2.56
CENPN-201ENST00000299572 TMEM94Q12767 1356 aa31.04■■■□□ 2.56
CENPN-201ENST00000299572 RRBP1Q9P2E9 1410 aaKnown RBP31.03■■■□□ 2.56
CENPN-201ENST00000299572 CHGAP10645 457 aaKnown RBP31.03■■■□□ 2.56
CENPN-201ENST00000299572 SOCS7O14512 581 aa31.01■■■□□ 2.55
CENPN-201ENST00000299572 PROSER2Q86WR7 435 aaPredicted RBP30.99■■■□□ 2.55
CENPN-201ENST00000299572 SENP3Q9H4L4 574 aaPredicted RBP30.99■■■□□ 2.55
CENPN-201ENST00000299572 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.98■■■□□ 2.55
CENPN-201ENST00000299572 CHD2O14647 1828 aaKnown RBP30.96■■■□□ 2.55
CENPN-201ENST00000299572 SPHKAPQ2M3C7 1700 aa30.95■■■□□ 2.55
CENPN-201ENST00000299572 RBM33Q96EV2 1170 aaKnown RBP30.92■■■□□ 2.54
CENPN-201ENST00000299572 FAM135BQ49AJ0 1406 aa30.91■■■□□ 2.54
CENPN-201ENST00000299572 DIP2AQ14689 1571 aa30.91■■■□□ 2.54
CENPN-201ENST00000299572 TBX22Q9Y458 520 aa30.9■■■□□ 2.54
CENPN-201ENST00000299572 NUTM2DQ5VT03 806 aaPredicted RBP30.89■■■□□ 2.54
CENPN-201ENST00000299572 NAIPQ13075 1403 aa30.88■■■□□ 2.53
CENPN-201ENST00000299572 ADAMTS13Q76LX8 1427 aa30.88■■■□□ 2.53
CENPN-201ENST00000299572 MSH6P52701 1360 aa30.88■■■□□ 2.53
CENPN-201ENST00000299572 ROBO1Q9Y6N7 1651 aa30.87■■■□□ 2.53
CENPN-201ENST00000299572 PIK3R4Q99570 1358 aa30.83■■■□□ 2.53
CENPN-201ENST00000299572 PHF23Q9BUL5 403 aaPredicted RBP30.82■■■□□ 2.52
CENPN-201ENST00000299572 TRPM2O94759 1503 aa30.82■■■□□ 2.52
CENPN-201ENST00000299572 HFM1A2PYH4 1435 aa30.79■■■□□ 2.52
CENPN-201ENST00000299572 NCOA3Q9Y6Q9 1424 aa30.79■■■□□ 2.52
CENPN-201ENST00000299572 CLTCL1P53675 1640 aa30.78■■■□□ 2.52
CENPN-201ENST00000299572 SETBP1Q9Y6X0 1596 aa30.75■■■□□ 2.51
CENPN-201ENST00000299572 NRXN3Q9Y4C0 1643 aa30.75■■■□□ 2.51
CENPN-201ENST00000299572 ZNF326Q5BKZ1 582 aaKnown RBP30.75■■■□□ 2.51
CENPN-201ENST00000299572 SLAIN2Q9P270 581 aa30.74■■■□□ 2.51
CENPN-201ENST00000299572 C14orf37Q86TY3 774 aa30.72■■■□□ 2.51
CENPN-201ENST00000299572 KIF1BO60333 1816 aa30.72■■■□□ 2.51
CENPN-201ENST00000299572 TRIM52Q96A61 297 aa30.7■■■□□ 2.51
CENPN-201ENST00000299572 PTPRUQ92729 1446 aa30.7■■■□□ 2.5
CENPN-201ENST00000299572 NEXMIFQ5QGS0 1516 aa30.69■■■□□ 2.5
CENPN-201ENST00000299572 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.69■■■□□ 2.5
CENPN-201ENST00000299572 PHLPP1O60346 1717 aa30.68■■■□□ 2.5
CENPN-201ENST00000299572 XRN1Q8IZH2 1706 aaKnown RBP30.68■■■□□ 2.5
CENPN-201ENST00000299572 AMOTL2Q9Y2J4 779 aa30.68■■■□□ 2.5
CENPN-201ENST00000299572 C19orf44Q9H6X5 657 aa30.65■■■□□ 2.5
CENPN-201ENST00000299572 CADPS2Q86UW7 1296 aa30.64■■■□□ 2.5
CENPN-201ENST00000299572 SLC4A1APQ9BWU0 796 aaKnown RBP30.62■■■□□ 2.49
CENPN-201ENST00000299572 ATF3P18847 181 aa30.61■■■□□ 2.49
CENPN-201ENST00000299572 METP08581 1390 aa30.6■■■□□ 2.49
CENPN-201ENST00000299572 COL16A1Q07092 1604 aaPredicted RBP30.59■■■□□ 2.49
CENPN-201ENST00000299572 DCCP43146 1447 aa30.57■■■□□ 2.48
CENPN-201ENST00000299572 JCADQ9P266 1359 aa30.56■■■□□ 2.48
CENPN-201ENST00000299572 RGS17Q9UGC6 210 aaPredicted RBP30.55■■■□□ 2.48
CENPN-201ENST00000299572 AHDC1Q5TGY3 1603 aaPredicted RBP30.54■■■□□ 2.48
CENPN-201ENST00000299572 VGFO15240 615 aaPredicted RBP30.51■■■□□ 2.47
CENPN-201ENST00000299572 PPLO60437 1756 aa30.5■■■□□ 2.47
CENPN-201ENST00000299572 SETD1AO15047 1707 aaKnown RBP30.5■■■□□ 2.47
CENPN-201ENST00000299572 RPGRIP1LQ68CZ1 1315 aa30.49■■■□□ 2.47
CENPN-201ENST00000299572 ADGRL3Q9HAR2 1447 aa30.47■■■□□ 2.47
CENPN-201ENST00000299572 NALCNQ8IZF0 1738 aa30.46■■■□□ 2.47
CENPN-201ENST00000299572 FOXD1Q16676 465 aa30.45■■■□□ 2.47
CENPN-201ENST00000299572 BRINP3Q76B58 766 aa30.45■■■□□ 2.47
CENPN-201ENST00000299572 MST1RQ04912 1400 aa30.45■■■□□ 2.46
CENPN-201ENST00000299572 ASXL1Q8IXJ9 1541 aa30.44■■■□□ 2.46
CENPN-201ENST00000299572 SHPRHQ149N8 1683 aa30.43■■■□□ 2.46
CENPN-201ENST00000299572 CCDC144AA2RUR9 1427 aa30.42■■■□□ 2.46
CENPN-201ENST00000299572 PTCH1Q13635 1447 aa30.42■■■□□ 2.46
CENPN-201ENST00000299572 SPATA31A6Q5VVP1 1343 aa30.41■■■□□ 2.46
CENPN-201ENST00000299572 POTEAQ6S8J7 498 aa30.39■■■□□ 2.45
CENPN-201ENST00000299572 NHSL1Q5SYE7 1610 aa30.38■■■□□ 2.45
CENPN-201ENST00000299572 MPHOSPH9Q99550 1183 aa30.38■■■□□ 2.45
CENPN-201ENST00000299572 LRP6O75581 1613 aa30.38■■■□□ 2.45
CENPN-201ENST00000299572 PRAG1Q86YV5 1406 aa30.37■■■□□ 2.45
CENPN-201ENST00000299572 ROBO2Q9HCK4 1378 aa30.35■■■□□ 2.45
CENPN-201ENST00000299572 IFT172Q9UG01 1749 aa30.33■■■□□ 2.45
CENPN-201ENST00000299572 SPATA31E1Q6ZUB1 1445 aa30.33■■■□□ 2.45
CENPN-201ENST00000299572 ACIN1Q9UKV3 1341 aaKnown RBP30.31■■■□□ 2.44
CENPN-201ENST00000299572 SETD5Q9C0A6 1442 aa30.31■■■□□ 2.44
CENPN-201ENST00000299572 MEX3CQ5U5Q3 659 aaKnown RBP30.3■■■□□ 2.44
CENPN-201ENST00000299572 RGL3Q3MIN7 710 aa30.29■■■□□ 2.44
CENPN-201ENST00000299572 C1orf167Q5SNV9 1468 aa30.29■■■□□ 2.44
CENPN-201ENST00000299572 ANKRD30BQ9BXX2 1392 aa30.28■■■□□ 2.44
CENPN-201ENST00000299572 ADGRF5Q8IZF2 1346 aa30.28■■■□□ 2.44
CENPN-201ENST00000299572 LRRC59Q96AG4 307 aaKnown RBP30.24■■■□□ 2.43
CENPN-201ENST00000299572 DDX17Q92841 729 aaKnown RBP30.23■■■□□ 2.43
CENPN-201ENST00000299572 LAMC1P11047 1609 aa30.22■■■□□ 2.43
CENPN-201ENST00000299572 NUTM2BA6NNL0 878 aaPredicted RBP30.21■■■□□ 2.43
CENPN-201ENST00000299572 NUTM2EB1AL46 878 aaPredicted RBP30.21■■■□□ 2.43
CENPN-201ENST00000299572 NUTM2AQ8IVF1 878 aaPredicted RBP30.21■■■□□ 2.43
CENPN-201ENST00000299572 ZNF772Q68DY9 489 aaPredicted RBP30.2■■■□□ 2.43
CENPN-201ENST00000299572 PIK3C2GO75747 1445 aa30.2■■■□□ 2.43
CENPN-201ENST00000299572 CDC42BPGQ6DT37 1551 aa30.2■■■□□ 2.42
CENPN-201ENST00000299572 TECPR2O15040 1411 aa30.18■■■□□ 2.42
CENPN-201ENST00000299572 PNPLA6Q8IY17 1366 aa30.18■■■□□ 2.42
CENPN-201ENST00000299572 RAB3GAP2Q9H2M9 1393 aa30.18■■■□□ 2.42
CENPN-201ENST00000299572 KNDC1Q76NI1 1749 aa30.18■■■□□ 2.42
CENPN-201ENST00000299572 LRPPRCP42704 1394 aaKnown RBP30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms