RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 XIRP1Q702N8 1843 aaKnown RBP24.8■■□□□ 1.56
NPM1-201ENST00000296930 SLC26A8Q96RN1 970 aa24.8■■□□□ 1.56
NPM1-201ENST00000296930 RIMS2Q9UQ26 1411 aa24.78■■□□□ 1.56
NPM1-201ENST00000296930 KCNA6P17658 529 aa24.78■■□□□ 1.56
NPM1-201ENST00000296930 BCANQ96GW7 911 aa24.77■■□□□ 1.56
NPM1-201ENST00000296930 CHGAP10645 457 aaKnown RBP24.77■■□□□ 1.56
NPM1-201ENST00000296930 PLEKHG1Q9ULL1 1385 aa24.76■■□□□ 1.55
NPM1-201ENST00000296930 PPP1R15AO75807 674 aaPredicted RBP24.76■■□□□ 1.55
NPM1-201ENST00000296930 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.75■■□□□ 1.55
NPM1-201ENST00000296930 NWD1Q149M9 1564 aa24.72■■□□□ 1.55
NPM1-201ENST00000296930 SPHKAPQ2M3C7 1700 aa24.72■■□□□ 1.55
NPM1-201ENST00000296930 NKTRP30414 1462 aaKnown RBP24.71■■□□□ 1.55
NPM1-201ENST00000296930 NAIPQ13075 1403 aa24.71■■□□□ 1.55
NPM1-201ENST00000296930 TMEM94Q12767 1356 aa24.71■■□□□ 1.55
NPM1-201ENST00000296930 PROSER2Q86WR7 435 aaPredicted RBP24.7■■□□□ 1.55
NPM1-201ENST00000296930 CHD2O14647 1828 aaKnown RBP24.69■■□□□ 1.54
NPM1-201ENST00000296930 ILDR2Q71H61 639 aa24.69■■□□□ 1.54
NPM1-201ENST00000296930 SENP3Q9H4L4 574 aaPredicted RBP24.68■■□□□ 1.54
NPM1-201ENST00000296930 TBX22Q9Y458 520 aa24.67■■□□□ 1.54
NPM1-201ENST00000296930 HFM1A2PYH4 1435 aa24.65■■□□□ 1.54
NPM1-201ENST00000296930 DIP2AQ14689 1571 aa24.64■■□□□ 1.54
NPM1-201ENST00000296930 NUTM2DQ5VT03 806 aaPredicted RBP24.64■■□□□ 1.53
NPM1-201ENST00000296930 ADAMTS13Q76LX8 1427 aa24.62■■□□□ 1.53
NPM1-201ENST00000296930 MED1Q15648 1581 aaPredicted RBP24.62■■□□□ 1.53
NPM1-201ENST00000296930 RBM33Q96EV2 1170 aaKnown RBP24.62■■□□□ 1.53
NPM1-201ENST00000296930 FAM135BQ49AJ0 1406 aa24.6■■□□□ 1.53
NPM1-201ENST00000296930 PIK3R4Q99570 1358 aa24.6■■□□□ 1.53
NPM1-201ENST00000296930 TRPM2O94759 1503 aa24.59■■□□□ 1.53
NPM1-201ENST00000296930 MSH6P52701 1360 aa24.59■■□□□ 1.53
NPM1-201ENST00000296930 TRIM52Q96A61 297 aa24.57■■□□□ 1.52
NPM1-201ENST00000296930 CLTCL1P53675 1640 aa24.57■■□□□ 1.52
NPM1-201ENST00000296930 ZNF326Q5BKZ1 582 aaKnown RBP24.57■■□□□ 1.52
NPM1-201ENST00000296930 KIF1BO60333 1816 aa24.55■■□□□ 1.52
NPM1-201ENST00000296930 NCOA3Q9Y6Q9 1424 aa24.55■■□□□ 1.52
NPM1-201ENST00000296930 ROBO1Q9Y6N7 1651 aa24.54■■□□□ 1.52
NPM1-201ENST00000296930 SOCS7O14512 581 aa24.54■■□□□ 1.52
NPM1-201ENST00000296930 SETBP1Q9Y6X0 1596 aa24.53■■□□□ 1.52
NPM1-201ENST00000296930 NRXN3Q9Y4C0 1643 aa24.51■■□□□ 1.51
NPM1-201ENST00000296930 SLC4A1APQ9BWU0 796 aaKnown RBP24.51■■□□□ 1.51
NPM1-201ENST00000296930 SLAIN2Q9P270 581 aa24.49■■□□□ 1.51
NPM1-201ENST00000296930 NEXMIFQ5QGS0 1516 aa24.49■■□□□ 1.51
NPM1-201ENST00000296930 AMOTL2Q9Y2J4 779 aa24.49■■□□□ 1.51
NPM1-201ENST00000296930 C14orf37Q86TY3 774 aa24.48■■□□□ 1.51
NPM1-201ENST00000296930 PTPRUQ92729 1446 aa24.47■■□□□ 1.51
NPM1-201ENST00000296930 PHF23Q9BUL5 403 aaPredicted RBP24.47■■□□□ 1.51
NPM1-201ENST00000296930 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.45■■□□□ 1.5
NPM1-201ENST00000296930 C19orf44Q9H6X5 657 aa24.44■■□□□ 1.5
NPM1-201ENST00000296930 XRN1Q8IZH2 1706 aaKnown RBP24.44■■□□□ 1.5
NPM1-201ENST00000296930 CADPS2Q86UW7 1296 aa24.42■■□□□ 1.5
NPM1-201ENST00000296930 TRIM26Q12899 539 aaPredicted RBP24.42■■□□□ 1.5
NPM1-201ENST00000296930 ATF3P18847 181 aa24.41■■□□□ 1.5
NPM1-201ENST00000296930 METP08581 1390 aa24.4■■□□□ 1.5
NPM1-201ENST00000296930 PHLPP1O60346 1717 aa24.4■■□□□ 1.5
NPM1-201ENST00000296930 VGFO15240 615 aaPredicted RBP24.39■■□□□ 1.5
NPM1-201ENST00000296930 RPGRIP1LQ68CZ1 1315 aa24.39■■□□□ 1.49
NPM1-201ENST00000296930 DCCP43146 1447 aa24.36■■□□□ 1.49
NPM1-201ENST00000296930 PPLO60437 1756 aa24.35■■□□□ 1.49
NPM1-201ENST00000296930 ACIN1Q9UKV3 1341 aaKnown RBP24.35■■□□□ 1.49
NPM1-201ENST00000296930 FOXD1Q16676 465 aa24.35■■□□□ 1.49
NPM1-201ENST00000296930 MPHOSPH9Q99550 1183 aa24.34■■□□□ 1.49
NPM1-201ENST00000296930 CCDC144AA2RUR9 1427 aa24.33■■□□□ 1.48
NPM1-201ENST00000296930 SETD1AO15047 1707 aaKnown RBP24.32■■□□□ 1.48
NPM1-201ENST00000296930 COL16A1Q07092 1604 aaPredicted RBP24.31■■□□□ 1.48
NPM1-201ENST00000296930 JCADQ9P266 1359 aa24.3■■□□□ 1.48
NPM1-201ENST00000296930 AHDC1Q5TGY3 1603 aaPredicted RBP24.3■■□□□ 1.48
NPM1-201ENST00000296930 SETD5Q9C0A6 1442 aa24.29■■□□□ 1.48
NPM1-201ENST00000296930 PCGF6Q9BYE7 350 aa24.29■■□□□ 1.48
NPM1-201ENST00000296930 ADGRL3Q9HAR2 1447 aa24.28■■□□□ 1.48
NPM1-201ENST00000296930 NALCNQ8IZF0 1738 aa24.26■■□□□ 1.47
NPM1-201ENST00000296930 PTCH1Q13635 1447 aa24.26■■□□□ 1.47
NPM1-201ENST00000296930 BRINP3Q76B58 766 aa24.26■■□□□ 1.47
NPM1-201ENST00000296930 RGS17Q9UGC6 210 aaPredicted RBP24.26■■□□□ 1.47
NPM1-201ENST00000296930 MST1RQ04912 1400 aa24.25■■□□□ 1.47
NPM1-201ENST00000296930 SPATA31E1Q6ZUB1 1445 aa24.24■■□□□ 1.47
NPM1-201ENST00000296930 PRAG1Q86YV5 1406 aa24.24■■□□□ 1.47
NPM1-201ENST00000296930 RGL3Q3MIN7 710 aa24.23■■□□□ 1.47
NPM1-201ENST00000296930 IFT172Q9UG01 1749 aa24.22■■□□□ 1.47
NPM1-201ENST00000296930 ASXL1Q8IXJ9 1541 aa24.22■■□□□ 1.47
NPM1-201ENST00000296930 ANKRD30BQ9BXX2 1392 aa24.22■■□□□ 1.47
NPM1-201ENST00000296930 ROBO2Q9HCK4 1378 aa24.21■■□□□ 1.47
NPM1-201ENST00000296930 SHPRHQ149N8 1683 aa24.2■■□□□ 1.46
NPM1-201ENST00000296930 SPATA31A6Q5VVP1 1343 aa24.2■■□□□ 1.46
NPM1-201ENST00000296930 ADGRF5Q8IZF2 1346 aa24.19■■□□□ 1.46
NPM1-201ENST00000296930 NHSL1Q5SYE7 1610 aa24.18■■□□□ 1.46
NPM1-201ENST00000296930 RAB3GAP2Q9H2M9 1393 aa24.18■■□□□ 1.46
NPM1-201ENST00000296930 POTEAQ6S8J7 498 aa24.14■■□□□ 1.45
NPM1-201ENST00000296930 C1orf167Q5SNV9 1468 aa24.13■■□□□ 1.45
NPM1-201ENST00000296930 LRP6O75581 1613 aa24.12■■□□□ 1.45
NPM1-201ENST00000296930 PIK3C2GO75747 1445 aa24.12■■□□□ 1.45
NPM1-201ENST00000296930 MEX3CQ5U5Q3 659 aaKnown RBP24.1■■□□□ 1.45
NPM1-201ENST00000296930 LRRC59Q96AG4 307 aaKnown RBP24.1■■□□□ 1.45
NPM1-201ENST00000296930 TECPR2O15040 1411 aa24.09■■□□□ 1.45
NPM1-201ENST00000296930 LRPPRCP42704 1394 aaKnown RBP24.09■■□□□ 1.45
NPM1-201ENST00000296930 KNDC1Q76NI1 1749 aa24.08■■□□□ 1.44
NPM1-201ENST00000296930 LAMC1P11047 1609 aa24.07■■□□□ 1.44
NPM1-201ENST00000296930 STK26Q9P289 416 aa24.07■■□□□ 1.44
NPM1-201ENST00000296930 CDC42BPGQ6DT37 1551 aa24.07■■□□□ 1.44
NPM1-201ENST00000296930 ABCC11Q96J66 1382 aa24.07■■□□□ 1.44
NPM1-201ENST00000296930 DDX17Q92841 729 aaKnown RBP24.06■■□□□ 1.44
NPM1-201ENST00000296930 MYOM2P54296 1465 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms