RNA–Protein interactions for RNA: ENST00000293549.3

WNT1-201, Transcript of Wnt family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene WNT1, Length 1,185 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WNT1-201ENST00000293549 SENP3Q9H4L4 574 aaPredicted RBP29.37■■■□□ 2.29
WNT1-201ENST00000293549 KCNA6P17658 529 aa29.34■■■□□ 2.29
WNT1-201ENST00000293549 NUP155O75694 1391 aa29.34■■■□□ 2.29
WNT1-201ENST00000293549 RBM33Q96EV2 1170 aaKnown RBP29.33■■■□□ 2.29
WNT1-201ENST00000293549 RIMS2Q9UQ26 1411 aa29.33■■■□□ 2.29
WNT1-201ENST00000293549 MED1Q15648 1581 aaPredicted RBP29.32■■■□□ 2.28
WNT1-201ENST00000293549 NWD1Q149M9 1564 aa29.31■■■□□ 2.28
WNT1-201ENST00000293549 TMEM94Q12767 1356 aa29.31■■■□□ 2.28
WNT1-201ENST00000293549 RRBP1Q9P2E9 1410 aaKnown RBP29.29■■■□□ 2.28
WNT1-201ENST00000293549 PLEKHG1Q9ULL1 1385 aa29.28■■■□□ 2.28
WNT1-201ENST00000293549 CHD2O14647 1828 aaKnown RBP29.27■■■□□ 2.28
WNT1-201ENST00000293549 SOCS7O14512 581 aa29.27■■■□□ 2.28
WNT1-201ENST00000293549 NUTM2DQ5VT03 806 aaPredicted RBP29.26■■■□□ 2.27
WNT1-201ENST00000293549 CHGAP10645 457 aaKnown RBP29.25■■■□□ 2.27
WNT1-201ENST00000293549 PROSER2Q86WR7 435 aaPredicted RBP29.23■■■□□ 2.27
WNT1-201ENST00000293549 BCANQ96GW7 911 aa29.22■■■□□ 2.27
WNT1-201ENST00000293549 ADAMTS13Q76LX8 1427 aa29.21■■■□□ 2.27
WNT1-201ENST00000293549 NKTRP30414 1462 aaKnown RBP29.21■■■□□ 2.27
WNT1-201ENST00000293549 SPHKAPQ2M3C7 1700 aa29.2■■■□□ 2.26
WNT1-201ENST00000293549 PPP1R15AO75807 674 aaPredicted RBP29.19■■■□□ 2.26
WNT1-201ENST00000293549 NAIPQ13075 1403 aa29.19■■■□□ 2.26
WNT1-201ENST00000293549 TBX22Q9Y458 520 aa29.17■■■□□ 2.26
WNT1-201ENST00000293549 FAM135BQ49AJ0 1406 aa29.17■■■□□ 2.26
WNT1-201ENST00000293549 HDGFP51858 240 aaKnown RBP29.14■■■□□ 2.26
WNT1-201ENST00000293549 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.14■■■□□ 2.26
WNT1-201ENST00000293549 ROBO1Q9Y6N7 1651 aa29.14■■■□□ 2.26
WNT1-201ENST00000293549 NRXN3Q9Y4C0 1643 aa29.11■■■□□ 2.25
WNT1-201ENST00000293549 CLTCL1P53675 1640 aa29.09■■■□□ 2.25
WNT1-201ENST00000293549 PTPRUQ92729 1446 aa29.09■■■□□ 2.25
WNT1-201ENST00000293549 DIP2AQ14689 1571 aa29.09■■■□□ 2.25
WNT1-201ENST00000293549 MSH6P52701 1360 aa29.05■■■□□ 2.24
WNT1-201ENST00000293549 HFM1A2PYH4 1435 aa29.03■■■□□ 2.24
WNT1-201ENST00000293549 TRPM2O94759 1503 aa29.03■■■□□ 2.24
WNT1-201ENST00000293549 PIK3R4Q99570 1358 aa29.02■■■□□ 2.24
WNT1-201ENST00000293549 SLAIN2Q9P270 581 aa29.02■■■□□ 2.24
WNT1-201ENST00000293549 SETBP1Q9Y6X0 1596 aa29.01■■■□□ 2.24
WNT1-201ENST00000293549 SIPA1L2Q9P2F8 1722 aaPredicted RBP29■■■□□ 2.23
WNT1-201ENST00000293549 RGS17Q9UGC6 210 aaPredicted RBP29■■■□□ 2.23
WNT1-201ENST00000293549 NEXMIFQ5QGS0 1516 aa28.99■■■□□ 2.23
WNT1-201ENST00000293549 AMOTL2Q9Y2J4 779 aa28.99■■■□□ 2.23
WNT1-201ENST00000293549 NCOA3Q9Y6Q9 1424 aa28.99■■■□□ 2.23
WNT1-201ENST00000293549 XRN1Q8IZH2 1706 aaKnown RBP28.97■■■□□ 2.23
WNT1-201ENST00000293549 ZNF326Q5BKZ1 582 aaKnown RBP28.97■■■□□ 2.23
WNT1-201ENST00000293549 PHF23Q9BUL5 403 aaPredicted RBP28.97■■■□□ 2.23
WNT1-201ENST00000293549 KIF1BO60333 1816 aa28.97■■■□□ 2.23
WNT1-201ENST00000293549 METP08581 1390 aa28.96■■■□□ 2.23
WNT1-201ENST00000293549 PHLPP1O60346 1717 aa28.95■■■□□ 2.23
WNT1-201ENST00000293549 TRIM52Q96A61 297 aa28.93■■■□□ 2.22
WNT1-201ENST00000293549 C19orf44Q9H6X5 657 aa28.91■■■□□ 2.22
WNT1-201ENST00000293549 C14orf37Q86TY3 774 aa28.89■■■□□ 2.22
WNT1-201ENST00000293549 COL16A1Q07092 1604 aaPredicted RBP28.89■■■□□ 2.22
WNT1-201ENST00000293549 SLC4A1APQ9BWU0 796 aaKnown RBP28.87■■■□□ 2.21
WNT1-201ENST00000293549 SETD1AO15047 1707 aaKnown RBP28.86■■■□□ 2.21
WNT1-201ENST00000293549 FOXD1Q16676 465 aa28.86■■■□□ 2.21
WNT1-201ENST00000293549 CADPS2Q86UW7 1296 aa28.84■■■□□ 2.21
WNT1-201ENST00000293549 ATF3P18847 181 aa28.82■■■□□ 2.2
WNT1-201ENST00000293549 PPLO60437 1756 aa28.8■■■□□ 2.2
WNT1-201ENST00000293549 AHDC1Q5TGY3 1603 aaPredicted RBP28.8■■■□□ 2.2
WNT1-201ENST00000293549 JCADQ9P266 1359 aa28.79■■■□□ 2.2
WNT1-201ENST00000293549 POTEAQ6S8J7 498 aa28.79■■■□□ 2.2
WNT1-201ENST00000293549 BRINP3Q76B58 766 aa28.79■■■□□ 2.2
WNT1-201ENST00000293549 DCCP43146 1447 aa28.77■■■□□ 2.2
WNT1-201ENST00000293549 NALCNQ8IZF0 1738 aa28.77■■■□□ 2.2
WNT1-201ENST00000293549 MST1RQ04912 1400 aa28.77■■■□□ 2.2
WNT1-201ENST00000293549 LRP6O75581 1613 aa28.74■■■□□ 2.19
WNT1-201ENST00000293549 VGFO15240 615 aaPredicted RBP28.73■■■□□ 2.19
WNT1-201ENST00000293549 ADGRL3Q9HAR2 1447 aa28.72■■■□□ 2.19
WNT1-201ENST00000293549 ASXL1Q8IXJ9 1541 aa28.72■■■□□ 2.19
WNT1-201ENST00000293549 RPGRIP1LQ68CZ1 1315 aa28.71■■■□□ 2.19
WNT1-201ENST00000293549 MPHOSPH9Q99550 1183 aa28.71■■■□□ 2.19
WNT1-201ENST00000293549 ROBO2Q9HCK4 1378 aa28.71■■■□□ 2.19
WNT1-201ENST00000293549 SHPRHQ149N8 1683 aa28.7■■■□□ 2.19
WNT1-201ENST00000293549 NHSL1Q5SYE7 1610 aa28.69■■■□□ 2.18
WNT1-201ENST00000293549 SPATA31E1Q6ZUB1 1445 aa28.69■■■□□ 2.18
WNT1-201ENST00000293549 PTCH1Q13635 1447 aa28.67■■■□□ 2.18
WNT1-201ENST00000293549 DDX17Q92841 729 aaKnown RBP28.66■■■□□ 2.18
WNT1-201ENST00000293549 ADGRF5Q8IZF2 1346 aa28.66■■■□□ 2.18
WNT1-201ENST00000293549 IFT172Q9UG01 1749 aa28.66■■■□□ 2.18
WNT1-201ENST00000293549 PRAG1Q86YV5 1406 aa28.65■■■□□ 2.18
WNT1-201ENST00000293549 CCDC144AA2RUR9 1427 aa28.63■■■□□ 2.17
WNT1-201ENST00000293549 SPATA31A6Q5VVP1 1343 aa28.63■■■□□ 2.17
WNT1-201ENST00000293549 RGL3Q3MIN7 710 aa28.62■■■□□ 2.17
WNT1-201ENST00000293549 SETD5Q9C0A6 1442 aa28.6■■■□□ 2.17
WNT1-201ENST00000293549 C1orf167Q5SNV9 1468 aa28.59■■■□□ 2.17
WNT1-201ENST00000293549 ORAI2Q96SN7 254 aa28.54■■■□□ 2.16
WNT1-201ENST00000293549 LAMC1P11047 1609 aa28.54■■■□□ 2.16
WNT1-201ENST00000293549 NUTM2BA6NNL0 878 aaPredicted RBP28.51■■■□□ 2.15
WNT1-201ENST00000293549 NUTM2EB1AL46 878 aaPredicted RBP28.51■■■□□ 2.15
WNT1-201ENST00000293549 NUTM2AQ8IVF1 878 aaPredicted RBP28.51■■■□□ 2.15
WNT1-201ENST00000293549 PIK3C2GO75747 1445 aa28.51■■■□□ 2.15
WNT1-201ENST00000293549 ANKRD30BQ9BXX2 1392 aa28.5■■■□□ 2.15
WNT1-201ENST00000293549 RAB3GAP2Q9H2M9 1393 aa28.5■■■□□ 2.15
WNT1-201ENST00000293549 MEX3CQ5U5Q3 659 aaKnown RBP28.5■■■□□ 2.15
WNT1-201ENST00000293549 PNPLA6Q8IY17 1366 aa28.5■■■□□ 2.15
WNT1-201ENST00000293549 TMEM132EQ6IEE7 984 aa28.49■■■□□ 2.15
WNT1-201ENST00000293549 LRRC59Q96AG4 307 aaKnown RBP28.49■■■□□ 2.15
WNT1-201ENST00000293549 WAPLQ7Z5K2 1190 aa28.48■■■□□ 2.15
WNT1-201ENST00000293549 TECPR2O15040 1411 aa28.48■■■□□ 2.15
WNT1-201ENST00000293549 STK26Q9P289 416 aa28.47■■■□□ 2.15
WNT1-201ENST00000293549 PLEKHH1Q9ULM0 1364 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms