RNA–Protein interactions for RNA: ENST00000292330.2

PPP1R35-201, Transcript of protein phosphatase 1 regulatory subunit 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1R35, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R35-201ENST00000292330 PROSER2Q86WR7 435 aaPredicted RBP40.82■■■■■ 4.13
PPP1R35-201ENST00000292330 GCC2Q8IWJ2 1684 aa40.82■■■■■ 4.12
PPP1R35-201ENST00000292330 CHGAP10645 457 aaKnown RBP40.81■■■■■ 4.12
PPP1R35-201ENST00000292330 PPP1R15AO75807 674 aaPredicted RBP40.8■■■■■ 4.12
PPP1R35-201ENST00000292330 RBM33Q96EV2 1170 aaKnown RBP40.8■■■■■ 4.12
PPP1R35-201ENST00000292330 PHF23Q9BUL5 403 aaPredicted RBP40.78■■■■■ 4.12
PPP1R35-201ENST00000292330 MYO5BQ9ULV0 1848 aa40.77■■■■■ 4.12
PPP1R35-201ENST00000292330 HDGFP51858 240 aaKnown RBP40.77■■■■■ 4.12
PPP1R35-201ENST00000292330 RIMS2Q9UQ26 1411 aa40.76■■■■■ 4.12
PPP1R35-201ENST00000292330 ZFYVE9O95405 1425 aa40.75■■■■■ 4.11
PPP1R35-201ENST00000292330 TMEM131LA2VDJ0 1609 aa40.73■■■■■ 4.11
PPP1R35-201ENST00000292330 NUP155O75694 1391 aa40.73■■■■■ 4.11
PPP1R35-201ENST00000292330 E9PCH4 1651 aa40.72■■■■■ 4.11
PPP1R35-201ENST00000292330 PLEKHG1Q9ULL1 1385 aa40.72■■■■■ 4.11
PPP1R35-201ENST00000292330 IQGAP3Q86VI3 1631 aa40.69■■■■■ 4.1
PPP1R35-201ENST00000292330 NUTM2DQ5VT03 806 aaPredicted RBP40.67■■■■■ 4.1
PPP1R35-201ENST00000292330 NKTRP30414 1462 aaKnown RBP40.66■■■■■ 4.1
PPP1R35-201ENST00000292330 ABCF1Q8NE71 845 aaKnown RBP eCLIP40.66■■■■■ 4.1
PPP1R35-201ENST00000292330 NWD1Q149M9 1564 aa40.65■■■■■ 4.1
PPP1R35-201ENST00000292330 FAM135BQ49AJ0 1406 aa40.65■■■■■ 4.1
PPP1R35-201ENST00000292330 MSH6P52701 1360 aa40.59■■■■■ 4.09
PPP1R35-201ENST00000292330 TBX22Q9Y458 520 aa40.58■■■■■ 4.09
PPP1R35-201ENST00000292330 CHD2O14647 1828 aaKnown RBP40.55■■■■■ 4.08
PPP1R35-201ENST00000292330 ROBO1Q9Y6N7 1651 aa40.53■■■■■ 4.08
PPP1R35-201ENST00000292330 SLAIN2Q9P270 581 aa40.49■■■■■ 4.07
PPP1R35-201ENST00000292330 C14orf37Q86TY3 774 aa40.48■■■■■ 4.07
PPP1R35-201ENST00000292330 ADAMTS13Q76LX8 1427 aa40.48■■■■■ 4.07
PPP1R35-201ENST00000292330 DIP2AQ14689 1571 aa40.41■■■■■ 4.06
PPP1R35-201ENST00000292330 ZNF326Q5BKZ1 582 aaKnown RBP40.4■■■■■ 4.06
PPP1R35-201ENST00000292330 RRBP1Q9P2E9 1410 aaKnown RBP40.39■■■■■ 4.06
PPP1R35-201ENST00000292330 SPHKAPQ2M3C7 1700 aa40.39■■■■■ 4.06
PPP1R35-201ENST00000292330 PIK3R4Q99570 1358 aa40.38■■■■■ 4.06
PPP1R35-201ENST00000292330 RGS17Q9UGC6 210 aaPredicted RBP40.37■■■■■ 4.05
PPP1R35-201ENST00000292330 NCOA3Q9Y6Q9 1424 aa40.36■■■■■ 4.05
PPP1R35-201ENST00000292330 AMOTL2Q9Y2J4 779 aa40.35■■■■■ 4.05
PPP1R35-201ENST00000292330 TRPM2O94759 1503 aa40.34■■■■■ 4.05
PPP1R35-201ENST00000292330 PHLPP1O60346 1717 aa40.3■■■■■ 4.04
PPP1R35-201ENST00000292330 ATF3P18847 181 aa40.3■■■■■ 4.04
PPP1R35-201ENST00000292330 C19orf44Q9H6X5 657 aa40.3■■■■■ 4.04
PPP1R35-201ENST00000292330 NAIPQ13075 1403 aa40.3■■■■■ 4.04
PPP1R35-201ENST00000292330 PTPRUQ92729 1446 aa40.28■■■■■ 4.04
PPP1R35-201ENST00000292330 CADPS2Q86UW7 1296 aa40.28■■■■■ 4.04
PPP1R35-201ENST00000292330 TRIM52Q96A61 297 aa40.25■■■■■ 4.03
PPP1R35-201ENST00000292330 SIPA1L2Q9P2F8 1722 aaPredicted RBP40.25■■■■■ 4.03
PPP1R35-201ENST00000292330 CLTCL1P53675 1640 aa40.22■■■■■ 4.03
PPP1R35-201ENST00000292330 JCADQ9P266 1359 aa40.22■■■■■ 4.03
PPP1R35-201ENST00000292330 NRXN3Q9Y4C0 1643 aa40.2■■■■■ 4.03
PPP1R35-201ENST00000292330 SETBP1Q9Y6X0 1596 aa40.2■■■■■ 4.03
PPP1R35-201ENST00000292330 METP08581 1390 aa40.16■■■■■ 4.02
PPP1R35-201ENST00000292330 POTEAQ6S8J7 498 aa40.16■■■■■ 4.02
PPP1R35-201ENST00000292330 COL16A1Q07092 1604 aaPredicted RBP40.13■■■■■ 4.02
PPP1R35-201ENST00000292330 HFM1A2PYH4 1435 aa40.12■■■■■ 4.01
PPP1R35-201ENST00000292330 NEXMIFQ5QGS0 1516 aa40.11■■■■■ 4.01
PPP1R35-201ENST00000292330 XRN1Q8IZH2 1706 aaKnown RBP40.11■■■■■ 4.01
PPP1R35-201ENST00000292330 KIF1BO60333 1816 aa40.11■■■■■ 4.01
PPP1R35-201ENST00000292330 SLC4A1APQ9BWU0 796 aaKnown RBP40.1■■■■■ 4.01
PPP1R35-201ENST00000292330 BRINP3Q76B58 766 aa40.07■■■■■ 4.01
PPP1R35-201ENST00000292330 AHDC1Q5TGY3 1603 aaPredicted RBP40.05■■■■■ 4
PPP1R35-201ENST00000292330 DCCP43146 1447 aa40.04■■■■■ 4
PPP1R35-201ENST00000292330 SPATA31A6Q5VVP1 1343 aa40.01■■■■■ 4
PPP1R35-201ENST00000292330 MEX3CQ5U5Q3 659 aaKnown RBP40.01■■■■■ 4
PPP1R35-201ENST00000292330 VGFO15240 615 aaPredicted RBP40■■■■□ 3.99
PPP1R35-201ENST00000292330 MST1RQ04912 1400 aa39.96■■■■□ 3.99
PPP1R35-201ENST00000292330 LRP6O75581 1613 aa39.95■■■■□ 3.99
PPP1R35-201ENST00000292330 ASXL1Q8IXJ9 1541 aa39.94■■■■□ 3.98
PPP1R35-201ENST00000292330 ADGRL3Q9HAR2 1447 aa39.93■■■■□ 3.98
PPP1R35-201ENST00000292330 FOXD1Q16676 465 aa39.93■■■■□ 3.98
PPP1R35-201ENST00000292330 RPGRIP1LQ68CZ1 1315 aa39.91■■■■□ 3.98
PPP1R35-201ENST00000292330 SHPRHQ149N8 1683 aa39.91■■■■□ 3.98
PPP1R35-201ENST00000292330 NUTM2BA6NNL0 878 aaPredicted RBP39.9■■■■□ 3.98
PPP1R35-201ENST00000292330 NUTM2EB1AL46 878 aaPredicted RBP39.9■■■■□ 3.98
PPP1R35-201ENST00000292330 NUTM2AQ8IVF1 878 aaPredicted RBP39.9■■■■□ 3.98
PPP1R35-201ENST00000292330 NALCNQ8IZF0 1738 aa39.87■■■■□ 3.97
PPP1R35-201ENST00000292330 DDX17Q92841 729 aaKnown RBP39.84■■■■□ 3.97
PPP1R35-201ENST00000292330 ROBO2Q9HCK4 1378 aa39.83■■■■□ 3.97
PPP1R35-201ENST00000292330 ZNF772Q68DY9 489 aaPredicted RBP39.82■■■■□ 3.97
PPP1R35-201ENST00000292330 SETD1AO15047 1707 aaKnown RBP39.81■■■■□ 3.96
PPP1R35-201ENST00000292330 PTCH1Q13635 1447 aa39.81■■■■□ 3.96
PPP1R35-201ENST00000292330 LRRC59Q96AG4 307 aaKnown RBP39.8■■■■□ 3.96
PPP1R35-201ENST00000292330 SETD5Q9C0A6 1442 aa39.8■■■■□ 3.96
PPP1R35-201ENST00000292330 NHSL1Q5SYE7 1610 aa39.8■■■■□ 3.96
PPP1R35-201ENST00000292330 PPLO60437 1756 aa39.79■■■■□ 3.96
PPP1R35-201ENST00000292330 RGL3Q3MIN7 710 aa39.77■■■■□ 3.96
PPP1R35-201ENST00000292330 CCDC144AA2RUR9 1427 aa39.76■■■■□ 3.96
PPP1R35-201ENST00000292330 MPHOSPH9Q99550 1183 aa39.76■■■■□ 3.96
PPP1R35-201ENST00000292330 C1orf167Q5SNV9 1468 aa39.75■■■■□ 3.95
PPP1R35-201ENST00000292330 ADGRF5Q8IZF2 1346 aa39.7■■■■□ 3.95
PPP1R35-201ENST00000292330 ORAI2Q96SN7 254 aa39.69■■■■□ 3.94
PPP1R35-201ENST00000292330 PRAG1Q86YV5 1406 aa39.66■■■■□ 3.94
PPP1R35-201ENST00000292330 PNPLA6Q8IY17 1366 aa39.66■■■■□ 3.94
PPP1R35-201ENST00000292330 AFF2P51816 1311 aa39.65■■■■□ 3.94
PPP1R35-201ENST00000292330 STK26Q9P289 416 aa39.65■■■■□ 3.94
PPP1R35-201ENST00000292330 RXRBP28702 533 aa39.64■■■■□ 3.94
PPP1R35-201ENST00000292330 SPATA31E1Q6ZUB1 1445 aa39.63■■■■□ 3.93
PPP1R35-201ENST00000292330 C8orf37Q96NL8 207 aa39.62■■■■□ 3.93
PPP1R35-201ENST00000292330 ANKRD30BQ9BXX2 1392 aa39.6■■■■□ 3.93
PPP1R35-201ENST00000292330 ADAMTS2O95450 1211 aa39.56■■■■□ 3.92
PPP1R35-201ENST00000292330 TMEM132EQ6IEE7 984 aa39.55■■■■□ 3.92
PPP1R35-201ENST00000292330 SOS2Q07890 1332 aaPredicted RBP39.55■■■■□ 3.92
PPP1R35-201ENST00000292330 ESCO1Q5FWF5 840 aa39.54■■■■□ 3.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms