RNA–Protein interactions for RNA: ENST00000290399.10

SIM2-201, Transcript of SIM bHLH transcription factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM2, Length 4,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM2-201ENST00000290399 RUNDC1Q96C34 613 aa23.02■■□□□ 1.28
SIM2-201ENST00000290399 FAM161AQ3B820 660 aa23.01■■□□□ 1.27
SIM2-201ENST00000290399 FANCIQ9NVI1 1328 aa23.01■■□□□ 1.27
SIM2-201ENST00000290399 NCOA1Q15788 1441 aa23.01■■□□□ 1.27
SIM2-201ENST00000290399 MTHFSP49914 203 aa23■■□□□ 1.27
SIM2-201ENST00000290399 CAMSAP2Q08AD1 1489 aa23■■□□□ 1.27
SIM2-201ENST00000290399 SLC4A3P48751 1232 aa22.99■■□□□ 1.27
SIM2-201ENST00000290399 PTPRKQ15262 1439 aa22.99■■□□□ 1.27
SIM2-201ENST00000290399 RIPK4P57078 832 aa22.98■■□□□ 1.27
SIM2-201ENST00000290399 SLC12A5Q9H2X9 1139 aa22.98■■□□□ 1.27
SIM2-201ENST00000290399 AKNAQ7Z591 1439 aa22.97■■□□□ 1.27
SIM2-201ENST00000290399 CFAP44Q96MT7 982 aa22.97■■□□□ 1.27
SIM2-201ENST00000290399 MCCP23508 829 aa22.94■■□□□ 1.26
SIM2-201ENST00000290399 FGD1P98174 961 aa22.94■■□□□ 1.26
SIM2-201ENST00000290399 TCP11L2Q8N4U5 519 aa22.94■■□□□ 1.26
SIM2-201ENST00000290399 CCDC141Q6ZP82 1450 aa22.93■■□□□ 1.26
SIM2-201ENST00000290399 RAPGEF3O95398 923 aa22.93■■□□□ 1.26
SIM2-201ENST00000290399 PTMAP06454 111 aaKnown RBP22.93■■□□□ 1.26
SIM2-201ENST00000290399 CSB-PGBD3P0DP91 1061 aa22.93■■□□□ 1.26
SIM2-201ENST00000290399 HMMRO75330 724 aa22.92■■□□□ 1.26
SIM2-201ENST00000290399 DZIP1LQ8IYY4 767 aaKnown RBP22.91■■□□□ 1.26
SIM2-201ENST00000290399 PANK1Q8TE04 598 aa22.91■■□□□ 1.26
SIM2-201ENST00000290399 GZF1Q9H116 711 aaPredicted RBP22.91■■□□□ 1.26
SIM2-201ENST00000290399 MAPKBP1O60336 1514 aa22.9■■□□□ 1.26
SIM2-201ENST00000290399 ERBINQ96RT1 1412 aa22.9■■□□□ 1.26
SIM2-201ENST00000290399 HMOX1P09601 288 aa22.89■■□□□ 1.26
SIM2-201ENST00000290399 THOC2Q8NI27 1593 aaKnown RBP22.89■■□□□ 1.25
SIM2-201ENST00000290399 RPRD2Q5VT52 1461 aaKnown RBP22.89■■□□□ 1.25
SIM2-201ENST00000290399 ANKRD45Q5TZF3 282 aa22.89■■□□□ 1.25
SIM2-201ENST00000290399 DDX19BQ9UMR2 479 aa22.87■■□□□ 1.25
SIM2-201ENST00000290399 PLCB2Q00722 1185 aa22.86■■□□□ 1.25
SIM2-201ENST00000290399 CHMP4AQ9BY43 222 aa22.86■■□□□ 1.25
SIM2-201ENST00000290399 TAOK2Q9UL54 1235 aa22.85■■□□□ 1.25
SIM2-201ENST00000290399 KIAA1211Q6ZU35 1233 aa22.85■■□□□ 1.25
SIM2-201ENST00000290399 PRAM1Q96QH2 718 aa22.85■■□□□ 1.25
SIM2-201ENST00000290399 NAP1L2Q9ULW6 460 aaPredicted RBP22.84■■□□□ 1.25
SIM2-201ENST00000290399 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.84■■□□□ 1.25
SIM2-201ENST00000290399 TRIM6-TRIM34B2RNG4 842 aa22.84■■□□□ 1.25
SIM2-201ENST00000290399 GBP4Q96PP9 640 aa22.83■■□□□ 1.25
SIM2-201ENST00000290399 L1TD1Q5T7N2 865 aaKnown RBP22.83■■□□□ 1.24
SIM2-201ENST00000290399 FOXD4L1Q9NU39 408 aa22.81■■□□□ 1.24
SIM2-201ENST00000290399 GPATCH8Q9UKJ3 1502 aaKnown RBP22.81■■□□□ 1.24
SIM2-201ENST00000290399 SMG6Q86US8 1419 aaKnown RBP22.81■■□□□ 1.24
SIM2-201ENST00000290399 ZRSR1Q15695 479 aaKnown RBP22.8■■□□□ 1.24
SIM2-201ENST00000290399 ZNF330Q9Y3S2 320 aaPredicted RBP22.8■■□□□ 1.24
SIM2-201ENST00000290399 SLC52A1Q9NWF4 448 aa22.79■■□□□ 1.24
SIM2-201ENST00000290399 BCAR3O75815 825 aa22.78■■□□□ 1.24
SIM2-201ENST00000290399 KIF14Q15058 1648 aa22.78■■□□□ 1.24
SIM2-201ENST00000290399 UGGT2Q9NYU1 1516 aa22.77■■□□□ 1.24
SIM2-201ENST00000290399 KIF16BQ96L93 1317 aa22.76■■□□□ 1.23
SIM2-201ENST00000290399 GNAI1P63096 354 aa22.76■■□□□ 1.23
SIM2-201ENST00000290399 DNTTIP2Q5QJE6 756 aaKnown RBP22.75■■□□□ 1.23
SIM2-201ENST00000290399 API5Q9BZZ5 524 aaKnown RBP22.75■■□□□ 1.23
SIM2-201ENST00000290399 GOLGA6L4A6NEF3 574 aa22.75■■□□□ 1.23
SIM2-201ENST00000290399 USP35Q9P2H5 1018 aa22.75■■□□□ 1.23
SIM2-201ENST00000290399 CABP1Q9NZU7 370 aa22.74■■□□□ 1.23
SIM2-201ENST00000290399 NUP153P49790 1475 aaKnown RBP22.73■■□□□ 1.23
SIM2-201ENST00000290399 NAP1L5Q96NT1 182 aaPredicted RBP22.73■■□□□ 1.23
SIM2-201ENST00000290399 LNPKQ9C0E8 428 aa22.73■■□□□ 1.23
SIM2-201ENST00000290399 PRKAR2BP31323 418 aa22.73■■□□□ 1.23
SIM2-201ENST00000290399 NECTIN2Q92692 538 aa22.73■■□□□ 1.23
SIM2-201ENST00000290399 EXOSC9Q06265 439 aaKnown RBP22.73■■□□□ 1.23
SIM2-201ENST00000290399 TXNDC2Q86VQ3 553 aa22.72■■□□□ 1.23
SIM2-201ENST00000290399 TEFQ10587 303 aa22.72■■□□□ 1.23
SIM2-201ENST00000290399 HDAC5Q9UQL6 1122 aa22.72■■□□□ 1.23
SIM2-201ENST00000290399 GLIPR1L2Q4G1C9 344 aa22.71■■□□□ 1.23
SIM2-201ENST00000290399 NOL8Q76FK4 1167 aaKnown RBP22.71■■□□□ 1.23
SIM2-201ENST00000290399 TSR2Q969E8 191 aaKnown RBP22.71■■□□□ 1.23
SIM2-201ENST00000290399 CDK19Q9BWU1 502 aa22.7■■□□□ 1.22
SIM2-201ENST00000290399 NPHP1O15259 732 aa22.69■■□□□ 1.22
SIM2-201ENST00000290399 EIF2S2P20042 333 aaKnown RBP22.69■■□□□ 1.22
SIM2-201ENST00000290399 PDE3AQ14432 1141 aa22.69■■□□□ 1.22
SIM2-201ENST00000290399 ATP10BO94823 1461 aa22.69■■□□□ 1.22
SIM2-201ENST00000290399 RPGRIP1LQ68CZ1 1315 aa22.68■■□□□ 1.22
SIM2-201ENST00000290399 CHMP3Q9Y3E7 222 aa22.68■■□□□ 1.22
SIM2-201ENST00000290399 ADGRF5Q8IZF2 1346 aa22.67■■□□□ 1.22
SIM2-201ENST00000290399 NUTM2GQ5VZR2 741 aa22.67■■□□□ 1.22
SIM2-201ENST00000290399 AAMPQ13685 434 aa22.67■■□□□ 1.22
SIM2-201ENST00000290399 RILPL2Q969X0 211 aa22.67■■□□□ 1.22
SIM2-201ENST00000290399 ST18O60284 1047 aa22.65■■□□□ 1.22
SIM2-201ENST00000290399 FKBP5Q13451 457 aaPredicted RBP22.65■■□□□ 1.22
SIM2-201ENST00000290399 NLRP6P59044 892 aa22.65■■□□□ 1.22
SIM2-201ENST00000290399 PSME1Q06323 249 aa22.65■■□□□ 1.22
SIM2-201ENST00000290399 TSPYL4Q9UJ04 414 aa22.65■■□□□ 1.22
SIM2-201ENST00000290399 C1orf141Q5JVX7 400 aa22.64■■□□□ 1.22
SIM2-201ENST00000290399 GPATCH3Q96I76 525 aa22.64■■□□□ 1.22
SIM2-201ENST00000290399 GOLGA6L3A6NEY3 463 aa22.64■■□□□ 1.21
SIM2-201ENST00000290399 RAPGEF6Q8TEU7 1601 aa22.63■■□□□ 1.21
SIM2-201ENST00000290399 ADGRL1O94910 1474 aa22.63■■□□□ 1.21
SIM2-201ENST00000290399 CD109Q6YHK3 1445 aa22.62■■□□□ 1.21
SIM2-201ENST00000290399 PTMSP20962 102 aa22.62■■□□□ 1.21
SIM2-201ENST00000290399 NSD3Q9BZ95 1437 aa22.62■■□□□ 1.21
SIM2-201ENST00000290399 SLFN5Q08AF3 891 aa22.61■■□□□ 1.21
SIM2-201ENST00000290399 CTTNBP2Q8WZ74 1663 aa22.61■■□□□ 1.21
SIM2-201ENST00000290399 WWC1Q8IX03 1113 aa22.61■■□□□ 1.21
SIM2-201ENST00000290399 WDR63Q8IWG1 891 aa22.6■■□□□ 1.21
SIM2-201ENST00000290399 BACH2Q9BYV9 841 aa22.6■■□□□ 1.21
SIM2-201ENST00000290399 GSE1Q14687 1217 aa22.6■■□□□ 1.21
SIM2-201ENST00000290399 FOXD4L5Q5VV16 416 aaPredicted RBP22.59■■□□□ 1.21
SIM2-201ENST00000290399 FOXD4L4Q8WXT5 416 aaPredicted RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms