RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 PLIN1O60240 522 aa17.24■□□□□ 0.35
NPC1-201ENST00000269228 EIF2S2P20042 333 aaKnown RBP17.23■□□□□ 0.35
NPC1-201ENST00000269228 NOP58Q9Y2X3 529 aaKnown RBP17.23■□□□□ 0.35
NPC1-201ENST00000269228 TTC5Q8N0Z6 440 aa17.23■□□□□ 0.35
NPC1-201ENST00000269228 SLC26A8Q96RN1 970 aa17.23■□□□□ 0.35
NPC1-201ENST00000269228 ESCO1Q5FWF5 840 aa17.22■□□□□ 0.35
NPC1-201ENST00000269228 NGEFQ8N5V2 710 aa17.22■□□□□ 0.35
NPC1-201ENST00000269228 TMX4Q9H1E5 349 aaPredicted RBP17.22■□□□□ 0.35
NPC1-201ENST00000269228 ZBED9Q6R2W3 1325 aa17.22■□□□□ 0.35
NPC1-201ENST00000269228 ISY1Q9ULR0 285 aaKnown RBP17.21■□□□□ 0.35
NPC1-201ENST00000269228 CDK11BP21127 795 aaKnown RBP17.21■□□□□ 0.35
NPC1-201ENST00000269228 CCDC141Q6ZP82 1450 aa17.21■□□□□ 0.35
NPC1-201ENST00000269228 TRIM6-TRIM34B2RNG4 842 aa17.21■□□□□ 0.35
NPC1-201ENST00000269228 TCERG1O14776 1098 aaKnown RBP17.21■□□□□ 0.35
NPC1-201ENST00000269228 CNTLNQ9NXG0 1405 aa17.21■□□□□ 0.35
NPC1-201ENST00000269228 NECTIN2Q92692 538 aa17.2■□□□□ 0.34
NPC1-201ENST00000269228 SYTL4Q96C24 671 aaPredicted RBP17.2■□□□□ 0.34
NPC1-201ENST00000269228 RUNDC1Q96C34 613 aa17.2■□□□□ 0.34
NPC1-201ENST00000269228 TULP1O00294 542 aaPredicted RBP17.2■□□□□ 0.34
NPC1-201ENST00000269228 ZKSCAN2Q63HK3 967 aa17.2■□□□□ 0.34
NPC1-201ENST00000269228 NLRP2Q9NX02 1062 aa17.2■□□□□ 0.34
NPC1-201ENST00000269228 BIVM-ERCC5R4GMW8 1640 aa17.2■□□□□ 0.34
NPC1-201ENST00000269228 POGZQ7Z3K3 1410 aa17.19■□□□□ 0.34
NPC1-201ENST00000269228 MTHFSP49914 203 aa17.19■□□□□ 0.34
NPC1-201ENST00000269228 ABTB2Q8N961 1025 aa17.19■□□□□ 0.34
NPC1-201ENST00000269228 ERBINQ96RT1 1412 aa17.19■□□□□ 0.34
NPC1-201ENST00000269228 RAPGEF4Q8WZA2 1011 aa17.19■□□□□ 0.34
NPC1-201ENST00000269228 GPATCH3Q96I76 525 aa17.19■□□□□ 0.34
NPC1-201ENST00000269228 NAIPQ13075 1403 aa17.19■□□□□ 0.34
NPC1-201ENST00000269228 SLC12A5Q9H2X9 1139 aa17.19■□□□□ 0.34
NPC1-201ENST00000269228 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.18■□□□□ 0.34
NPC1-201ENST00000269228 CAMSAP2Q08AD1 1489 aa17.18■□□□□ 0.34
NPC1-201ENST00000269228 MEX3CQ5U5Q3 659 aaKnown RBP17.18■□□□□ 0.34
NPC1-201ENST00000269228 GPRASP1Q5JY77 1395 aa17.18■□□□□ 0.34
NPC1-201ENST00000269228 TRIM44Q96DX7 344 aaPredicted RBP17.17■□□□□ 0.34
NPC1-201ENST00000269228 ADGRL1O94910 1474 aa17.17■□□□□ 0.34
NPC1-201ENST00000269228 ANKLE2Q86XL3 938 aa17.17■□□□□ 0.34
NPC1-201ENST00000269228 COG6Q9Y2V7 657 aa17.17■□□□□ 0.34
NPC1-201ENST00000269228 ROCK1Q13464 1354 aa17.17■□□□□ 0.34
NPC1-201ENST00000269228 CDK19Q9BWU1 502 aa17.17■□□□□ 0.34
NPC1-201ENST00000269228 MFAP1P55081 439 aaKnown RBP17.16■□□□□ 0.34
NPC1-201ENST00000269228 RTN4Q9NQC3 1192 aaKnown RBP17.16■□□□□ 0.34
NPC1-201ENST00000269228 KIF14Q15058 1648 aa17.15■□□□□ 0.34
NPC1-201ENST00000269228 GOLGA6L4A6NEF3 574 aa17.15■□□□□ 0.34
NPC1-201ENST00000269228 CABP1Q9NZU7 370 aa17.15■□□□□ 0.34
NPC1-201ENST00000269228 RRP1P56182 461 aaKnown RBP17.15■□□□□ 0.34
NPC1-201ENST00000269228 PTMAP06454 111 aaKnown RBP17.14■□□□□ 0.33
NPC1-201ENST00000269228 RBM19Q9Y4C8 960 aaKnown RBP17.14■□□□□ 0.33
NPC1-201ENST00000269228 ABCC5O15440 1437 aa17.14■□□□□ 0.33
NPC1-201ENST00000269228 RPGRIP1LQ68CZ1 1315 aa17.14■□□□□ 0.33
NPC1-201ENST00000269228 EXOC6Q8TAG9 804 aa17.14■□□□□ 0.33
NPC1-201ENST00000269228 NEXNQ0ZGT2 675 aa17.13■□□□□ 0.33
NPC1-201ENST00000269228 PLCB2Q00722 1185 aa17.13■□□□□ 0.33
NPC1-201ENST00000269228 ADAMTS8Q9UP79 889 aa17.13■□□□□ 0.33
NPC1-201ENST00000269228 CRBNQ96SW2 442 aa17.13■□□□□ 0.33
NPC1-201ENST00000269228 TSPYL4Q9UJ04 414 aa17.13■□□□□ 0.33
NPC1-201ENST00000269228 ANKRD30BQ9BXX2 1392 aa17.12■□□□□ 0.33
NPC1-201ENST00000269228 FRAT2O75474 233 aaPredicted RBP17.12■□□□□ 0.33
NPC1-201ENST00000269228 G3V3G9 751 aa17.12■□□□□ 0.33
NPC1-201ENST00000269228 MSH5O43196 834 aa17.12■□□□□ 0.33
NPC1-201ENST00000269228 DCAF8Q5TAQ9 597 aa17.12■□□□□ 0.33
NPC1-201ENST00000269228 PTPN23Q9H3S7 1636 aa17.11■□□□□ 0.33
NPC1-201ENST00000269228 GNAI1P63096 354 aa17.11■□□□□ 0.33
NPC1-201ENST00000269228 PPP2R1AP30153 589 aa17.11■□□□□ 0.33
NPC1-201ENST00000269228 C9orf78Q9NZ63 289 aaPredicted RBP17.11■□□□□ 0.33
NPC1-201ENST00000269228 USP35Q9P2H5 1018 aa17.11■□□□□ 0.33
NPC1-201ENST00000269228 FKBP5Q13451 457 aaPredicted RBP17.1■□□□□ 0.33
NPC1-201ENST00000269228 ANKRD45Q5TZF3 282 aa17.1■□□□□ 0.33
NPC1-201ENST00000269228 RTEL1-TNFRSF6BF6WH68 1400 aa17.08■□□□□ 0.33
NPC1-201ENST00000269228 GNL2Q13823 731 aaKnown RBP17.08■□□□□ 0.32
NPC1-201ENST00000269228 BRD4O60885 1362 aaPredicted RBP17.08■□□□□ 0.32
NPC1-201ENST00000269228 API5Q9BZZ5 524 aaKnown RBP17.08■□□□□ 0.32
NPC1-201ENST00000269228 TCP11L2Q8N4U5 519 aa17.08■□□□□ 0.32
NPC1-201ENST00000269228 DZIP1LQ8IYY4 767 aaKnown RBP17.07■□□□□ 0.32
NPC1-201ENST00000269228 FBXO31Q5XUX0 539 aaPredicted RBP17.07■□□□□ 0.32
NPC1-201ENST00000269228 ZNF692Q9BU19 519 aaPredicted RBP17.07■□□□□ 0.32
NPC1-201ENST00000269228 SLKQ9H2G2 1235 aaPredicted RBP17.07■□□□□ 0.32
NPC1-201ENST00000269228 PRKAR2BP31323 418 aa17.06■□□□□ 0.32
NPC1-201ENST00000269228 FANCAO15360 1455 aa17.06■□□□□ 0.32
NPC1-201ENST00000269228 DDX58O95786 925 aaKnown RBP17.06■□□□□ 0.32
NPC1-201ENST00000269228 CENPQQ7L2Z9 268 aaPredicted RBP17.06■□□□□ 0.32
NPC1-201ENST00000269228 DDX19BQ9UMR2 479 aa17.06■□□□□ 0.32
NPC1-201ENST00000269228 MAP3K1Q13233 1512 aa17.05■□□□□ 0.32
NPC1-201ENST00000269228 CEBPAP49715 358 aaPredicted RBP17.05■□□□□ 0.32
NPC1-201ENST00000269228 AKNAQ7Z591 1439 aa17.05■□□□□ 0.32
NPC1-201ENST00000269228 RILPL2Q969X0 211 aa17.04■□□□□ 0.32
NPC1-201ENST00000269228 STRN4Q9NRL3 753 aa17.04■□□□□ 0.32
NPC1-201ENST00000269228 NCOA1Q15788 1441 aa17.04■□□□□ 0.32
NPC1-201ENST00000269228 DENND4BO75064 1496 aaPredicted RBP17.03■□□□□ 0.32
NPC1-201ENST00000269228 NOL8Q76FK4 1167 aaKnown RBP17.03■□□□□ 0.32
NPC1-201ENST00000269228 THOC2Q8NI27 1593 aaKnown RBP17.02■□□□□ 0.32
NPC1-201ENST00000269228 TOMM22Q9NS69 142 aa17.02■□□□□ 0.32
NPC1-201ENST00000269228 AIMP1Q12904 312 aaKnown RBP17.02■□□□□ 0.31
NPC1-201ENST00000269228 WAPLQ7Z5K2 1190 aa17.01■□□□□ 0.31
NPC1-201ENST00000269228 HSP90B1P14625 803 aaKnown RBP17.01■□□□□ 0.31
NPC1-201ENST00000269228 XPCQ01831 940 aaPredicted RBP17.01■□□□□ 0.31
NPC1-201ENST00000269228 IDI1Q13907 227 aa17.01■□□□□ 0.31
NPC1-201ENST00000269228 GAS2L2Q8NHY3 880 aa17.01■□□□□ 0.31
NPC1-201ENST00000269228 KIF16BQ96L93 1317 aa17.01■□□□□ 0.31
NPC1-201ENST00000269228 SULT6B1Q6IMI4 303 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms