RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 HDGFP51858 240 aaKnown RBP8.69□□□□□ -1.02
HERC2-201ENST00000261609 CCDC191Q8NCU4 936 aa8.69□□□□□ -1.02
HERC2-201ENST00000261609 ERCC4Q92889 916 aaPredicted RBP8.69□□□□□ -1.02
HERC2-201ENST00000261609 FAM184AQ8NB25 1140 aa8.69□□□□□ -1.02
HERC2-201ENST00000261609 L3MBTL2Q969R5 705 aa8.69□□□□□ -1.02
HERC2-201ENST00000261609 BACH2Q9BYV9 841 aa8.69□□□□□ -1.02
HERC2-201ENST00000261609 PRPF40AO75400 957 aaKnown RBP8.69□□□□□ -1.02
HERC2-201ENST00000261609 COG6Q9Y2V7 657 aa8.69□□□□□ -1.02
HERC2-201ENST00000261609 ANKRD30AQ9BXX3 1397 aa8.69□□□□□ -1.02
HERC2-201ENST00000261609 MPNDQ8N594 471 aa8.68□□□□□ -1.02
HERC2-201ENST00000261609 PRKRIP1Q9H875 184 aaPredicted RBP8.68□□□□□ -1.02
HERC2-201ENST00000261609 MCM4P33991 863 aa8.68□□□□□ -1.02
HERC2-201ENST00000261609 TSPYL1Q9H0U9 437 aa8.68□□□□□ -1.02
HERC2-201ENST00000261609 AEBP1Q8IUX7 1158 aa8.68□□□□□ -1.02
HERC2-201ENST00000261609 RUFY1Q96T51 708 aa8.68□□□□□ -1.02
HERC2-201ENST00000261609 TRIM5Q9C035 493 aa8.68□□□□□ -1.02
HERC2-201ENST00000261609 AAMPQ13685 434 aa8.68□□□□□ -1.02
HERC2-201ENST00000261609 SAFB2Q14151 953 aaKnown RBP eCLIP8.68□□□□□ -1.02
HERC2-201ENST00000261609 PANK3Q9H999 370 aa8.68□□□□□ -1.02
HERC2-201ENST00000261609 DHX57Q6P158 1386 aaKnown RBP8.68□□□□□ -1.02
HERC2-201ENST00000261609 CGNQ9P2M7 1197 aaKnown RBP8.67□□□□□ -1.02
HERC2-201ENST00000261609 SOX12O15370 315 aa8.67□□□□□ -1.02
HERC2-201ENST00000261609 IPO7O95373 1038 aaKnown RBP8.67□□□□□ -1.02
HERC2-201ENST00000261609 GPATCH11Q8N954 259 aa8.67□□□□□ -1.02
HERC2-201ENST00000261609 CCDC112Q8NEF3 446 aa8.67□□□□□ -1.02
HERC2-201ENST00000261609 SLC4A10Q6U841 1118 aa8.67□□□□□ -1.02
HERC2-201ENST00000261609 PDCL2Q8N4E4 241 aa8.67□□□□□ -1.02
HERC2-201ENST00000261609 RILPL2Q969X0 211 aa8.67□□□□□ -1.02
HERC2-201ENST00000261609 TERF2IPQ9NYB0 399 aa8.67□□□□□ -1.02
HERC2-201ENST00000261609 NUP155O75694 1391 aa8.67□□□□□ -1.02
HERC2-201ENST00000261609 EIF4G1Q04637 1599 aaKnown RBP8.67□□□□□ -1.02
HERC2-201ENST00000261609 SPC24Q8NBT2 197 aa8.67□□□□□ -1.02
HERC2-201ENST00000261609 CALCOCO1Q9P1Z2 691 aa8.67□□□□□ -1.02
HERC2-201ENST00000261609 CEP89Q96ST8 783 aa8.66□□□□□ -1.02
HERC2-201ENST00000261609 NCBP3Q53F19 620 aaKnown RBP8.66□□□□□ -1.02
HERC2-201ENST00000261609 ZSCAN30Q86W11 494 aa8.66□□□□□ -1.02
HERC2-201ENST00000261609 RUFY2Q8WXA3 655 aa8.66□□□□□ -1.02
HERC2-201ENST00000261609 HOOK1Q9UJC3 728 aaKnown RBP8.66□□□□□ -1.02
HERC2-201ENST00000261609 DDX19BQ9UMR2 479 aa8.66□□□□□ -1.02
HERC2-201ENST00000261609 NGEFQ8N5V2 710 aa8.66□□□□□ -1.02
HERC2-201ENST00000261609 ANKRD20A12PQ8NF67 263 aa8.66□□□□□ -1.02
HERC2-201ENST00000261609 STK26Q9P289 416 aa8.66□□□□□ -1.02
HERC2-201ENST00000261609 BAZ1AQ9NRL2 1556 aaPredicted RBP8.66□□□□□ -1.02
HERC2-201ENST00000261609 CDR1P51861 262 aa8.66□□□□□ -1.02
HERC2-201ENST00000261609 DCTN1Q14203 1278 aa8.66□□□□□ -1.02
HERC2-201ENST00000261609 NAT10Q9H0A0 1025 aaKnown RBP8.66□□□□□ -1.02
HERC2-201ENST00000261609 STK11IPQ8N1F8 1099 aa8.65□□□□□ -1.02
HERC2-201ENST00000261609 TRERF1Q96PN7 1200 aa8.65□□□□□ -1.02
HERC2-201ENST00000261609 PDIA4P13667 645 aaKnown RBP8.65□□□□□ -1.02
HERC2-201ENST00000261609 PPP4R3BQ5MIZ7 849 aa8.65□□□□□ -1.02
HERC2-201ENST00000261609 IPO4Q8TEX9 1081 aaKnown RBP8.65□□□□□ -1.02
HERC2-201ENST00000261609 USP8P40818 1118 aa8.65□□□□□ -1.03
HERC2-201ENST00000261609 BICD2Q8TD16 824 aa8.65□□□□□ -1.03
HERC2-201ENST00000261609 CCP110O43303 1012 aa8.64□□□□□ -1.03
HERC2-201ENST00000261609 KIAA0754O94854 1291 aa8.64□□□□□ -1.03
HERC2-201ENST00000261609 TIGD1Q96MW7 591 aa8.64□□□□□ -1.03
HERC2-201ENST00000261609 ZKSCAN1P17029 563 aaPredicted RBP8.64□□□□□ -1.03
HERC2-201ENST00000261609 RRP7AQ9Y3A4 280 aaKnown RBP8.64□□□□□ -1.03
HERC2-201ENST00000261609 GTF2A1P52655 376 aaPredicted RBP8.64□□□□□ -1.03
HERC2-201ENST00000261609 PDILTQ8N807 584 aa8.64□□□□□ -1.03
HERC2-201ENST00000261609 BCL2L13Q9BXK5 485 aa8.64□□□□□ -1.03
HERC2-201ENST00000261609 INTS3Q68E01 1043 aaKnown RBP8.64□□□□□ -1.03
HERC2-201ENST00000261609 NAP1L1P55209 391 aaKnown RBP8.64□□□□□ -1.03
HERC2-201ENST00000261609 MBD3O95983 291 aa8.64□□□□□ -1.03
HERC2-201ENST00000261609 ANO2Q9NQ90 1003 aa8.64□□□□□ -1.03
HERC2-201ENST00000261609 CWC22Q9HCG8 908 aaKnown RBP8.63□□□□□ -1.03
HERC2-201ENST00000261609 CUX2O14529 1486 aa8.63□□□□□ -1.03
HERC2-201ENST00000261609 IRX3P78415 501 aaPredicted RBP8.63□□□□□ -1.03
HERC2-201ENST00000261609 AKAP17AQ02040 695 aaKnown RBP8.63□□□□□ -1.03
HERC2-201ENST00000261609 GIMAP7Q8NHV1 300 aa8.63□□□□□ -1.03
HERC2-201ENST00000261609 SMC3Q9UQE7 1217 aa8.63□□□□□ -1.03
HERC2-201ENST00000261609 ST20-MTHFSA0A0A6YYL1 179 aa8.63□□□□□ -1.03
HERC2-201ENST00000261609 NACADO15069 1562 aa8.63□□□□□ -1.03
HERC2-201ENST00000261609 USP47Q96K76 1375 aa8.63□□□□□ -1.03
HERC2-201ENST00000261609 DZIP1LQ8IYY4 767 aaKnown RBP8.63□□□□□ -1.03
HERC2-201ENST00000261609 SMC2O95347 1197 aa8.63□□□□□ -1.03
HERC2-201ENST00000261609 DYDC1Q8WWB3 177 aa8.63□□□□□ -1.03
HERC2-201ENST00000261609 CAGE1Q8TC20 777 aa8.62□□□□□ -1.03
HERC2-201ENST00000261609 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.62□□□□□ -1.03
HERC2-201ENST00000261609 SPDYE4A6NLX3 237 aa8.62□□□□□ -1.03
HERC2-201ENST00000261609 PCMTD1Q96MG8 357 aaPredicted RBP8.62□□□□□ -1.03
HERC2-201ENST00000261609 CT47B1P0C2W7 299 aaPredicted RBP8.62□□□□□ -1.03
HERC2-201ENST00000261609 CCDC73Q6ZRK6 1079 aa8.62□□□□□ -1.03
HERC2-201ENST00000261609 CENPHQ9H3R5 247 aa8.62□□□□□ -1.03
HERC2-201ENST00000261609 RNF20Q5VTR2 975 aa8.62□□□□□ -1.03
HERC2-201ENST00000261609 ABCC8Q09428 1581 aa8.61□□□□□ -1.03
HERC2-201ENST00000261609 ROCK1Q13464 1354 aa8.61□□□□□ -1.03
HERC2-201ENST00000261609 DYNC1I1O14576 645 aa8.61□□□□□ -1.03
HERC2-201ENST00000261609 POLR3GO15318 223 aaPredicted RBP8.61□□□□□ -1.03
HERC2-201ENST00000261609 SDF4Q9BRK5 362 aa8.61□□□□□ -1.03
HERC2-201ENST00000261609 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.61□□□□□ -1.03
HERC2-201ENST00000261609 AXDND1Q5T1B0 1012 aaPredicted RBP8.6□□□□□ -1.03
HERC2-201ENST00000261609 PLCD3Q8N3E9 789 aa8.6□□□□□ -1.03
HERC2-201ENST00000261609 TOMM22Q9NS69 142 aa8.6□□□□□ -1.03
HERC2-201ENST00000261609 LRRFIP1Q32MZ4 808 aaKnown RBP8.6□□□□□ -1.03
HERC2-201ENST00000261609 MARCH6O60337 910 aa8.6□□□□□ -1.03
HERC2-201ENST00000261609 GTPBP4Q9BZE4 634 aaKnown RBP8.6□□□□□ -1.03
HERC2-201ENST00000261609 CDC45O75419 566 aa8.6□□□□□ -1.03
HERC2-201ENST00000261609 XPCQ01831 940 aaPredicted RBP8.6□□□□□ -1.03
HERC2-201ENST00000261609 DNAJC2Q99543 621 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms