RNA–Protein interactions for RNA: ENSMUST00000187280.1

Gm28054-201, mousemouse

TSL 3 BASIC

Gene Gm28054, Length 872 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28054-201ENSMUST00000187280 MsmpB1AWI6 139 aa12.77□□□□□ -0.37
Gm28054-201ENSMUST00000187280 Hoxb4P10284 250 aa12.76□□□□□ -0.37
Gm28054-201ENSMUST00000187280 Tmem52Q9D702 196 aa12.74□□□□□ -0.37
Gm28054-201ENSMUST00000187280 Pax4P32115 349 aa12.72□□□□□ -0.37
Gm28054-201ENSMUST00000187280 Atf4Q06507 349 aa12.7□□□□□ -0.38
Gm28054-201ENSMUST00000187280 Themis2Q91YX0 663 aa12.7□□□□□ -0.38
Gm28054-201ENSMUST00000187280 Speer3W4VSP1 261 aa12.7□□□□□ -0.38
Gm28054-201ENSMUST00000187280 Gm4788E9Q8B5 879 aa12.69□□□□□ -0.38
Gm28054-201ENSMUST00000187280 MarsQ68FL6 902 aaKnown RBP12.69□□□□□ -0.38
Gm28054-201ENSMUST00000187280 Suz12Q80U70 741 aaKnown RBP12.69□□□□□ -0.38
Gm28054-201ENSMUST00000187280 FcrlaQ920A9 352 aa12.69□□□□□ -0.38
Gm28054-201ENSMUST00000187280 PtpreP49446 699 aa12.68□□□□□ -0.38
Gm28054-201ENSMUST00000187280 Dbn1Q9QXS6 706 aa12.68□□□□□ -0.38
Gm28054-201ENSMUST00000187280 ColqO35348 457 aa12.67□□□□□ -0.38
Gm28054-201ENSMUST00000187280 Pola2P33611 600 aa12.67□□□□□ -0.38
Gm28054-201ENSMUST00000187280 Tpcn1Q9EQJ0 817 aa12.67□□□□□ -0.38
Gm28054-201ENSMUST00000187280 Spaca7Q9D2S4 182 aa12.66□□□□□ -0.38
Gm28054-201ENSMUST00000187280 Thsd4Q3UTY6 1018 aa12.65□□□□□ -0.38
Gm28054-201ENSMUST00000187280 Zfp943Q6NZP4 507 aa12.65□□□□□ -0.38
Gm28054-201ENSMUST00000187280 Znf330Q922H9 316 aa12.65□□□□□ -0.38
Gm28054-201ENSMUST00000187280 Grxcr1Q50H32 290 aa12.64□□□□□ -0.39
Gm28054-201ENSMUST00000187280 Traf7Q922B6 594 aa12.62□□□□□ -0.39
Gm28054-201ENSMUST00000187280 Cdca7lQ922M5 438 aa12.61□□□□□ -0.39
Gm28054-201ENSMUST00000187280 UvssaQ9D479 717 aa12.61□□□□□ -0.39
Gm28054-201ENSMUST00000187280 SowahcQ8C0J6 512 aa12.6□□□□□ -0.39
Gm28054-201ENSMUST00000187280 Mei1Q9D4I2 1268 aa12.6□□□□□ -0.39
Gm28054-201ENSMUST00000187280 Nckap5lQ6GQX2 1323 aa12.6□□□□□ -0.39
Gm28054-201ENSMUST00000187280 Zpr1Q62384 459 aa12.59□□□□□ -0.39
Gm28054-201ENSMUST00000187280 Plcg2Q8CIH5 1265 aa12.59□□□□□ -0.39
Gm28054-201ENSMUST00000187280 Usp26Q99MX1 835 aa12.58□□□□□ -0.4
Gm28054-201ENSMUST00000187280 Trbv21A0A0A6YX06 97 aa12.57□□□□□ -0.4
Gm28054-201ENSMUST00000187280 AW822073A0A0N4SUK1 652 aa12.57□□□□□ -0.4
Gm28054-201ENSMUST00000187280 Usp46P62069 366 aa12.57□□□□□ -0.4
Gm28054-201ENSMUST00000187280 Cdv3Q4VAA2 281 aaKnown RBP12.57□□□□□ -0.4
Gm28054-201ENSMUST00000187280 Ppfia1B2RXQ2 1266 aa12.56□□□□□ -0.4
Gm28054-201ENSMUST00000187280 Dsg2O55111 1122 aa12.56□□□□□ -0.4
Gm28054-201ENSMUST00000187280 Pla2g2cP48076 150 aa12.56□□□□□ -0.4
Gm28054-201ENSMUST00000187280 Ube3bQ9ES34 1070 aa12.56□□□□□ -0.4
Gm28054-201ENSMUST00000187280 Stk11ipQ3TAA7 1072 aa12.54□□□□□ -0.4
Gm28054-201ENSMUST00000187280 Cyp7a1Q64505 503 aa12.54□□□□□ -0.4
Gm28054-201ENSMUST00000187280 Adamts19P59509 1210 aa12.52□□□□□ -0.41
Gm28054-201ENSMUST00000187280 Spryd7Q3TFQ1 196 aa12.52□□□□□ -0.41
Gm28054-201ENSMUST00000187280 Scaf1Q5U4C3 1256 aaKnown RBP12.52□□□□□ -0.41
Gm28054-201ENSMUST00000187280 Vsig10D3YX43 558 aa12.51□□□□□ -0.41
Gm28054-201ENSMUST00000187280 Hhipl2Q9D2G9 717 aa12.51□□□□□ -0.41
Gm28054-201ENSMUST00000187280 Thap11Q9JJD0 305 aa12.51□□□□□ -0.41
Gm28054-201ENSMUST00000187280 Pcdhb16Q91Y03 802 aa12.5□□□□□ -0.41
Gm28054-201ENSMUST00000187280 Dnajc14Q921R4 703 aa12.5□□□□□ -0.41
Gm28054-201ENSMUST00000187280 Adam19O35674 920 aa12.49□□□□□ -0.41
Gm28054-201ENSMUST00000187280 Foxj1Q61660 421 aa12.49□□□□□ -0.41
Gm28054-201ENSMUST00000187280 Dsc3P55850 896 aa12.48□□□□□ -0.41
Gm28054-201ENSMUST00000187280 Mtfr1Q99MB2 328 aa12.47□□□□□ -0.41
Gm28054-201ENSMUST00000187280 Pnma5Q5DTT8 618 aa12.46□□□□□ -0.41
Gm28054-201ENSMUST00000187280 Setdb1O88974 1307 aa12.45□□□□□ -0.42
Gm28054-201ENSMUST00000187280 Man1a2P39098 641 aa12.45□□□□□ -0.42
Gm28054-201ENSMUST00000187280 NppbP40753 121 aa12.45□□□□□ -0.42
Gm28054-201ENSMUST00000187280 Usp3Q91W36 520 aaKnown RBP12.45□□□□□ -0.42
Gm28054-201ENSMUST00000187280 Catsper2A2ARP9 588 aa12.44□□□□□ -0.42
Gm28054-201ENSMUST00000187280 Recql4Q75NR7 1216 aaKnown RBP12.44□□□□□ -0.42
Gm28054-201ENSMUST00000187280 Rtn1Q8K0T0 780 aa12.44□□□□□ -0.42
Gm28054-201ENSMUST00000187280 Spink5Q148R4 1017 aa12.42□□□□□ -0.42
Gm28054-201ENSMUST00000187280 Slc30a10Q3UVU3 470 aa12.42□□□□□ -0.42
Gm28054-201ENSMUST00000187280 Igflr1Q3U4N7 345 aa12.41□□□□□ -0.42
Gm28054-201ENSMUST00000187280 F11Q91Y47 624 aa12.41□□□□□ -0.42
Gm28054-201ENSMUST00000187280 Prr18Q6PAN7 307 aa12.38□□□□□ -0.43
Gm28054-201ENSMUST00000187280 Fcf1Q9CTH6 198 aa12.36□□□□□ -0.43
Gm28054-201ENSMUST00000187280 Chtf18Q8BIW9 969 aa12.35□□□□□ -0.43
Gm28054-201ENSMUST00000187280 IrgqQ8VIM9 583 aa12.35□□□□□ -0.43
Gm28054-201ENSMUST00000187280 Ms4a4bQ9ES61 226 aa12.34□□□□□ -0.43
Gm28054-201ENSMUST00000187280 Ankrd33bQ3U0L2 486 aa12.33□□□□□ -0.44
Gm28054-201ENSMUST00000187280 Eml3Q8VC03 897 aa12.33□□□□□ -0.44
Gm28054-201ENSMUST00000187280 Mmp16Q9WTR0 607 aa12.33□□□□□ -0.44
Gm28054-201ENSMUST00000187280 Pcdhb3Q91XZ7 784 aa12.32□□□□□ -0.44
Gm28054-201ENSMUST00000187280 Nek1P51954 1203 aa12.3□□□□□ -0.44
Gm28054-201ENSMUST00000187280 4930504O13RikQ8C5Z9 145 aa12.3□□□□□ -0.44
Gm28054-201ENSMUST00000187280 Pcdhb22Q91XZ8 794 aa12.3□□□□□ -0.44
Gm28054-201ENSMUST00000187280 Slc10a4Q3UEZ8 437 aa12.29□□□□□ -0.44
Gm28054-201ENSMUST00000187280 Nsfl1cQ9CZ44 370 aaKnown RBP12.29□□□□□ -0.44
Gm28054-201ENSMUST00000187280 Gm17324Q8C6J8 137 aa12.27□□□□□ -0.45
Gm28054-201ENSMUST00000187280 Armc3A2AU72 881 aa12.26□□□□□ -0.45
Gm28054-201ENSMUST00000187280 Ccdc102aQ3TMW1 549 aa12.23□□□□□ -0.45
Gm28054-201ENSMUST00000187280 ClmQ7TSN2 230 aa12.23□□□□□ -0.45
Gm28054-201ENSMUST00000187280 FanccP50652 591 aa12.22□□□□□ -0.45
Gm28054-201ENSMUST00000187280 Fut2Q9JL27 347 aa12.22□□□□□ -0.45
Gm28054-201ENSMUST00000187280 Limd1Q9QXD8 668 aa12.22□□□□□ -0.45
Gm28054-201ENSMUST00000187280 Hoxb3P09026 433 aa12.21□□□□□ -0.45
Gm28054-201ENSMUST00000187280 Abcf1Q6P542 837 aaKnown RBP12.21□□□□□ -0.45
Gm28054-201ENSMUST00000187280 5730596B20RikQ8BQ08 205 aa12.21□□□□□ -0.45
Gm28054-201ENSMUST00000187280 Ccdc96Q9CR92 584 aa12.21□□□□□ -0.45
Gm28054-201ENSMUST00000187280 Pacs2Q3V3Q7 862 aa12.2□□□□□ -0.46
Gm28054-201ENSMUST00000187280 Gtf2ird1Q9JI57 1104 aaKnown RBP12.2□□□□□ -0.46
Gm28054-201ENSMUST00000187280 TbcelQ8C5W3 424 aa12.19□□□□□ -0.46
Gm28054-201ENSMUST00000187280 LrgukQ9D5S7 820 aa12.19□□□□□ -0.46
Gm28054-201ENSMUST00000187280 Nubp1Q9R060 320 aa12.19□□□□□ -0.46
Gm28054-201ENSMUST00000187280 A0A1L1SQF0 893 aa12.18□□□□□ -0.46
Gm28054-201ENSMUST00000187280 PtprnQ60673 979 aa12.18□□□□□ -0.46
Gm28054-201ENSMUST00000187280 Adam26aQ9R158 697 aa12.18□□□□□ -0.46
Gm28054-201ENSMUST00000187280 Atp6v1aP50516 617 aaKnown RBP12.17□□□□□ -0.46
Gm28054-201ENSMUST00000187280 Trak1Q6PD31 939 aa12.17□□□□□ -0.46
Gm28054-201ENSMUST00000187280 Dixdc1Q80Y83 711 aa12.17□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 43.4 ms