RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W PHO89P38361 574 aa1.69□□□□□ -2.14
RTT107YHR154W PDS1P40316 373 aaPredicted RBP1.69□□□□□ -2.14
RTT107YHR154W PAN6P40459 309 aa1.69□□□□□ -2.14
RTT107YHR154W TPN1P53099 579 aa1.69□□□□□ -2.14
RTT107YHR154W COS1P53822 381 aa1.69□□□□□ -2.14
RTT107YHR154W YNL140CP53910 189 aa1.69□□□□□ -2.14
RTT107YHR154W TPS1Q00764 495 aaKnown RBP1.69□□□□□ -2.14
RTT107YHR154W UTP15Q04305 513 aaKnown RBP1.69□□□□□ -2.14
RTT107YHR154W YDR115WQ04598 105 aa1.69□□□□□ -2.14
RTT107YHR154W YMR254CQ04838 102 aa1.69□□□□□ -2.14
RTT107YHR154W YLR177WQ06251 628 aa1.69□□□□□ -2.14
RTT107YHR154W YLR179CQ06252 201 aaKnown RBP1.69□□□□□ -2.14
RTT107YHR154W MMT2Q08970 484 aa1.69□□□□□ -2.14
RTT107YHR154W YPL245WQ12179 454 aaKnown RBP1.69□□□□□ -2.14
RTT107YHR154W YGK3Q12222 375 aaPredicted RBP1.69□□□□□ -2.14
RTT107YHR154W ERV2Q12284 196 aa1.69□□□□□ -2.14
RTT107YHR154W MRX4Q12467 430 aa1.69□□□□□ -2.14
RTT107YHR154W RPL21BQ12672 160 aaKnown RBP1.69□□□□□ -2.14
RTT107YHR154W YIR021W-AQ3E739 70 aa1.69□□□□□ -2.14
RTT107YHR154W MET2P08465 486 aa1.68□□□□□ -2.14
RTT107YHR154W YFL068WP0CX99 160 aa1.68□□□□□ -2.14
RTT107YHR154W YLL066W-AP0CY00 160 aa1.68□□□□□ -2.14
RTT107YHR154W YLL067W-AP0CY01 160 aa1.68□□□□□ -2.14
RTT107YHR154W NMT1P14743 455 aa1.68□□□□□ -2.14
RTT107YHR154W LDS1P31379 325 aa1.68□□□□□ -2.14
RTT107YHR154W ECM33P38248 429 aaKnown RBP1.68□□□□□ -2.14
RTT107YHR154W GOS1P38736 223 aa1.68□□□□□ -2.14
RTT107YHR154W CYC2P38909 366 aa1.68□□□□□ -2.14
RTT107YHR154W NBP35P52920 328 aa1.68□□□□□ -2.14
RTT107YHR154W PDR17P53844 350 aa1.68□□□□□ -2.14
RTT107YHR154W YNG1Q08465 219 aa1.68□□□□□ -2.14
RTT107YHR154W OSW1Q08692 278 aa1.68□□□□□ -2.14
RTT107YHR154W ATX2Q12067 313 aa1.68□□□□□ -2.14
RTT107YHR154W PRM4Q12498 284 aa1.68□□□□□ -2.14
RTT107YHR154W COS2P0CX12 379 aa1.68□□□□□ -2.14
RTT107YHR154W COS3P0CX13 379 aa1.68□□□□□ -2.14
RTT107YHR154W CAT2P32796 670 aaKnown RBP1.68□□□□□ -2.14
RTT107YHR154W RMD6P39975 231 aa1.68□□□□□ -2.14
RTT107YHR154W EGT2P42835 1041 aa1.68□□□□□ -2.14
RTT107YHR154W COS4P43542 379 aa1.68□□□□□ -2.14
RTT107YHR154W YGL034CP53186 121 aa1.68□□□□□ -2.14
RTT107YHR154W RNH201P53942 307 aa1.68□□□□□ -2.14
RTT107YHR154W ABF2Q02486 183 aa1.68□□□□□ -2.14
RTT107YHR154W YML108WQ03759 105 aa1.68□□□□□ -2.14
RTT107YHR154W LIP2Q06005 328 aa1.68□□□□□ -2.14
RTT107YHR154W YPR127WQ06494 345 aa1.68□□□□□ -2.14
RTT107YHR154W RSA1Q08932 381 aa1.68□□□□□ -2.14
RTT107YHR154W YOR342CQ12182 319 aa1.68□□□□□ -2.14
RTT107YHR154W AYT1Q12226 474 aa1.68□□□□□ -2.14
RTT107YHR154W NOT5Q12514 560 aaPredicted RBP1.68□□□□□ -2.14
RTT107YHR154W YBL008W-AQ3E821 79 aa1.68□□□□□ -2.14
RTT107YHR154W STF2P16965 84 aa1.68□□□□□ -2.14
RTT107YHR154W YHL049CP38722 271 aa1.68□□□□□ -2.14
RTT107YHR154W DIM1P41819 318 aaKnown RBP1.68□□□□□ -2.14
RTT107YHR154W EMC4P53073 190 aa1.68□□□□□ -2.14
RTT107YHR154W NQM1P53228 333 aaPredicted RBP1.68□□□□□ -2.14
RTT107YHR154W FMP48P53233 369 aa1.68□□□□□ -2.14
RTT107YHR154W CLD1P53264 445 aa1.68□□□□□ -2.14
RTT107YHR154W CRH1P53301 507 aa1.68□□□□□ -2.14
RTT107YHR154W CRZ1P53968 678 aa1.68□□□□□ -2.14
RTT107YHR154W DID2P69771 204 aa1.68□□□□□ -2.14
RTT107YHR154W DML1Q03652 475 aa1.68□□□□□ -2.14
RTT107YHR154W FMP42Q04991 504 aa1.68□□□□□ -2.14
RTT107YHR154W USB1Q12208 290 aaKnown RBP1.68□□□□□ -2.14
RTT107YHR154W FOL3Q12676 427 aaPredicted RBP1.68□□□□□ -2.14
RTT107YHR154W SIR2P06700 562 aa1.67□□□□□ -2.14
RTT107YHR154W YER190C-BP0CX94 160 aa1.67□□□□□ -2.14
RTT107YHR154W YEL077W-AP0CX95 160 aa1.67□□□□□ -2.14
RTT107YHR154W YGR296C-BP0CX96 160 aa1.67□□□□□ -2.14
RTT107YHR154W YPL283W-BP0CX97 160 aa1.67□□□□□ -2.14
RTT107YHR154W YPR204C-AP0CX98 160 aa1.67□□□□□ -2.14
RTT107YHR154W MSI1P13712 422 aa1.67□□□□□ -2.14
RTT107YHR154W ATS1P31386 333 aa1.67□□□□□ -2.14
RTT107YHR154W PTM1P32857 523 aa1.67□□□□□ -2.14
RTT107YHR154W PRM5P40476 318 aa1.67□□□□□ -2.14
RTT107YHR154W IRC18P47056 224 aa1.67□□□□□ -2.14
RTT107YHR154W YNR066CP53752 436 aa1.67□□□□□ -2.14
RTT107YHR154W HRI1Q05905 244 aaKnown RBP1.67□□□□□ -2.14
RTT107YHR154W COQ10Q08058 207 aa1.67□□□□□ -2.14
RTT107YHR154W YOL160WQ08321 113 aa1.67□□□□□ -2.14
RTT107YHR154W SLD7Q08457 257 aa1.67□□□□□ -2.14
RTT107YHR154W YPL264CQ08980 353 aa1.67□□□□□ -2.14
RTT107YHR154W YOR283WQ12040 230 aaKnown RBP1.67□□□□□ -2.14
RTT107YHR154W CMD1P06787 147 aaKnown RBP1.67□□□□□ -2.14
RTT107YHR154W SEC14P24280 304 aaKnown RBP1.67□□□□□ -2.14
RTT107YHR154W CPR4P25334 318 aa1.67□□□□□ -2.14
RTT107YHR154W ATG22P25568 528 aa1.67□□□□□ -2.14
RTT107YHR154W MRPL28P36527 147 aa1.67□□□□□ -2.14
RTT107YHR154W MIX23P38162 196 aa1.67□□□□□ -2.14
RTT107YHR154W YBR242WP38331 238 aa1.67□□□□□ -2.14
RTT107YHR154W MDM31P38880 579 aa1.67□□□□□ -2.14
RTT107YHR154W AST2P39945 430 aaKnown RBP1.67□□□□□ -2.14
RTT107YHR154W YIL067CP40514 678 aa1.67□□□□□ -2.14
RTT107YHR154W MRPL49P40858 161 aaPredicted RBP1.67□□□□□ -2.14
RTT107YHR154W YJR085CP47131 105 aaKnown RBP1.67□□□□□ -2.14
RTT107YHR154W RPL21AQ02753 160 aaKnown RBP1.67□□□□□ -2.14
RTT107YHR154W SEI1Q06058 285 aa1.67□□□□□ -2.14
RTT107YHR154W DXO1Q06349 442 aa1.67□□□□□ -2.14
RTT107YHR154W AGC1Q12482 902 aa1.67□□□□□ -2.14
RTT107YHR154W MDN1Q12019 4910 aaKnown RBP1.67□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 71.1 ms