RNA–Protein interactions for RNA: YGL238W

CSE1, Transcript of Nuclear envelope protein that mediates the nuclear export of Srp1p, yeastyeast

Gene CSE1, Length 2,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSE1YGL238W ZRT1P32804 376 aa-0.12□□□□□ -2.43
CSE1YGL238W SEC28P40509 296 aaKnown RBP-0.12□□□□□ -2.43
CSE1YGL238W GLG2P47011 380 aa-0.12□□□□□ -2.43
CSE1YGL238W YAE1P47118 141 aaPredicted RBP-0.12□□□□□ -2.43
CSE1YGL238W RHO3Q00245 231 aaKnown RBP-0.12□□□□□ -2.43
CSE1YGL238W NBL1Q3E7Y6 73 aa-0.12□□□□□ -2.43
CSE1YGL238W GAL3P13045 520 aa-0.12□□□□□ -2.43
CSE1YGL238W RPS5P26783 225 aaKnown RBP-0.12□□□□□ -2.43
CSE1YGL238W PEX3P28795 441 aa-0.12□□□□□ -2.43
CSE1YGL238W VPS45P38932 577 aa-0.12□□□□□ -2.43
CSE1YGL238W ARC15P40518 154 aaRIP-Chip data-0.12□□□□□ -2.43not detected
CSE1YGL238W YFH7P43591 353 aa-0.12□□□□□ -2.43
CSE1YGL238W YGR168CP53293 376 aa-0.12□□□□□ -2.43
CSE1YGL238W YMR111CQ04461 462 aaPredicted RBP-0.12□□□□□ -2.43
CSE1YGL238W YLR283WQ05867 314 aa-0.12□□□□□ -2.43
CSE1YGL238W ARV1Q06541 321 aa-0.12□□□□□ -2.43
CSE1YGL238W RPS0AP32905 252 aaKnown RBP-0.13□□□□□ -2.43
CSE1YGL238W GDT1P38301 280 aaPredicted RBP-0.13□□□□□ -2.43
CSE1YGL238W YHR125WP38831 101 aa-0.13□□□□□ -2.43
CSE1YGL238W CUE3P53137 624 aaKnown RBP-0.13□□□□□ -2.43
CSE1YGL238W POP3P53833 195 aaPredicted RBP-0.13□□□□□ -2.43
CSE1YGL238W PDR16P53860 351 aaKnown RBP-0.13□□□□□ -2.43
CSE1YGL238W REX3Q12090 404 aa-0.13□□□□□ -2.43
CSE1YGL238W TAL1P15019 335 aaKnown RBP-0.13□□□□□ -2.43
CSE1YGL238W UGX2P32772 223 aa-0.13□□□□□ -2.43
CSE1YGL238W TMA19P35691 167 aaKnown RBP-0.13□□□□□ -2.43
CSE1YGL238W GTO1P48239 356 aa-0.13□□□□□ -2.43
CSE1YGL238W MNT4P53745 580 aa-0.13□□□□□ -2.43
CSE1YGL238W PRO2P54885 456 aaKnown RBP-0.13□□□□□ -2.43
CSE1YGL238W PBP4Q07362 185 aaKnown RBP-0.13□□□□□ -2.43
CSE1YGL238W MSW1P04803 379 aa-0.14□□□□□ -2.43
CSE1YGL238W RAD3P06839 778 aa-0.14□□□□□ -2.43
CSE1YGL238W RIB4P50861 169 aaPredicted RBP-0.14□□□□□ -2.43
CSE1YGL238W YGR016WP53209 190 aa-0.14□□□□□ -2.43
CSE1YGL238W CTF19Q02732 369 aa-0.14□□□□□ -2.43
CSE1YGL238W TAF9Q05027 157 aa-0.14□□□□□ -2.43
CSE1YGL238W YPR011CQ12251 326 aa-0.14□□□□□ -2.43
CSE1YGL238W RNR2P09938 399 aaKnown RBP-0.14□□□□□ -2.43
CSE1YGL238W GCY1P14065 312 aaKnown RBP RIP-Chip data-0.14□□□□□ -2.43not detected
CSE1YGL238W SWI3P32591 825 aa-0.14□□□□□ -2.43
CSE1YGL238W RCN1P36054 211 aa-0.14□□□□□ -2.43
CSE1YGL238W RIB1P38066 345 aa-0.14□□□□□ -2.43
CSE1YGL238W HIS2P38635 335 aa-0.14□□□□□ -2.43
CSE1YGL238W COS8P38723 381 aa-0.14□□□□□ -2.43
CSE1YGL238W YEA4P40004 342 aa-0.14□□□□□ -2.43
CSE1YGL238W RIO2P40160 425 aaKnown RBP-0.14□□□□□ -2.43
CSE1YGL238W AIM20P40451 204 aa-0.14□□□□□ -2.43
CSE1YGL238W CUP9P41817 306 aa-0.14□□□□□ -2.43
CSE1YGL238W ADO1P47143 340 aaKnown RBP-0.14□□□□□ -2.43
CSE1YGL238W CCC1P47818 322 aa-0.14□□□□□ -2.43
CSE1YGL238W ERG25P53045 309 aa-0.14□□□□□ -2.43
CSE1YGL238W EMC4P53073 190 aa-0.14□□□□□ -2.43
CSE1YGL238W ARP5P53946 755 aa-0.14□□□□□ -2.43
CSE1YGL238W YMR279CQ03263 540 aa-0.14□□□□□ -2.43
CSE1YGL238W VPS20Q04272 221 aa-0.14□□□□□ -2.43
CSE1YGL238W SEC10Q06245 871 aa-0.14□□□□□ -2.43
CSE1YGL238W YLR462WO13556 202 aa-0.15□□□□□ -2.43
CSE1YGL238W RPS24AP0CX31 135 aaKnown RBP-0.15□□□□□ -2.43
CSE1YGL238W RPS24BP0CX32 135 aaKnown RBP-0.15□□□□□ -2.43
CSE1YGL238W FRS2P15625 503 aaKnown RBP-0.15□□□□□ -2.43
CSE1YGL238W JEN1P36035 616 aa-0.15□□□□□ -2.43
CSE1YGL238W TVP38P36164 337 aa-0.15□□□□□ -2.43
CSE1YGL238W YHL042WP38729 150 aa-0.15□□□□□ -2.43
CSE1YGL238W GAA1P39012 614 aa-0.15□□□□□ -2.43
CSE1YGL238W YEL075CP39972 122 aa-0.15□□□□□ -2.43
CSE1YGL238W FLX1P40464 311 aa-0.15□□□□□ -2.43
CSE1YGL238W AGP3P43548 558 aa-0.15□□□□□ -2.43
CSE1YGL238W YJL055WP47044 245 aa-0.15□□□□□ -2.43
CSE1YGL238W YGR219WP53307 113 aa-0.15□□□□□ -2.43
CSE1YGL238W CUS2P53830 285 aaPredicted RBP-0.15□□□□□ -2.43
CSE1YGL238W LAP3Q01532 483 aaKnown RBP RIP-Chip data-0.15□□□□□ -2.43not detected
CSE1YGL238W YMR007WQ03675 126 aa-0.15□□□□□ -2.43
CSE1YGL238W UIP4Q08926 304 aa-0.15□□□□□ -2.43
CSE1YGL238W TPO4Q12256 659 aa-0.15□□□□□ -2.43
CSE1YGL238W YOR343CQ12484 108 aa-0.15□□□□□ -2.43
CSE1YGL238W YMR105W-AQ8TGS8 64 aa-0.15□□□□□ -2.43
CSE1YGL238W YHR139C-AO13536 103 aa-0.15□□□□□ -2.43
CSE1YGL238W RPC40P07703 335 aaKnown RBP-0.15□□□□□ -2.43
CSE1YGL238W YHR212W-AP0CX91 67 aa-0.15□□□□□ -2.43
CSE1YGL238W TRM5P38793 499 aa-0.15□□□□□ -2.43
CSE1YGL238W GDI1P39958 451 aaKnown RBP-0.15□□□□□ -2.43
CSE1YGL238W THO1P40040 218 aaKnown RBP-0.15□□□□□ -2.43
CSE1YGL238W TIR3P40552 269 aa-0.15□□□□□ -2.43
CSE1YGL238W LSB1P53281 241 aa-0.15□□□□□ -2.43
CSE1YGL238W SPC19Q03954 165 aa-0.15□□□□□ -2.43
CSE1YGL238W RIM9Q04734 239 aa-0.15□□□□□ -2.43
CSE1YGL238W FAR8Q05040 523 aa-0.15□□□□□ -2.43
CSE1YGL238W CUR1Q06469 252 aa-0.15□□□□□ -2.43
CSE1YGL238W HEM25Q07534 307 aa-0.15□□□□□ -2.43
CSE1YGL238W YOR029WQ12243 111 aa-0.15□□□□□ -2.43
CSE1YGL238W FRE6Q12473 712 aa-0.15□□□□□ -2.43
CSE1YGL238W IZH4Q99393 312 aa-0.15□□□□□ -2.43
CSE1YGL238W QCR8P08525 94 aa-0.16□□□□□ -2.43
CSE1YGL238W RPL27BP0C2H7 136 aaKnown RBP-0.16□□□□□ -2.43
CSE1YGL238W RPL5P26321 297 aaKnown RBP-0.16□□□□□ -2.43
CSE1YGL238W CAM1P29547 415 aaKnown RBP-0.16□□□□□ -2.43
CSE1YGL238W SRY1P36007 326 aa-0.16□□□□□ -2.43
CSE1YGL238W YRB2P40517 327 aa-0.16□□□□□ -2.43
CSE1YGL238W DOC1P53068 250 aa-0.16□□□□□ -2.43
CSE1YGL238W YGL159WP53110 370 aa-0.16□□□□□ -2.43
Retrieved 100 of 5,963 RNA–protein pairs in 69.7 ms