RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 CCND1P24385 295 aa17.55■□□□□ 0.4
SCARB2-210ENST00000638567 SHMT1P34896 483 aa17.55■□□□□ 0.4
SCARB2-210ENST00000638567 COPS2P61201 443 aa17.55■□□□□ 0.4
SCARB2-210ENST00000638567 DALRD3Q5D0E6 543 aaKnown RBP17.55■□□□□ 0.4
SCARB2-210ENST00000638567 RGS9BPQ6ZS82 235 aa17.55■□□□□ 0.4
SCARB2-210ENST00000638567 FEZF2Q8TBJ5 459 aa17.55■□□□□ 0.4
SCARB2-210ENST00000638567 TAS1R2Q8TE23 839 aa17.55■□□□□ 0.4
SCARB2-210ENST00000638567 FAM86B1E9PN63 330 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 PRKCBP05771 671 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 FAM86B2P0C5J1 330 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 PDGFRAP16234 1089 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 MX2P20592 715 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 TYK2P29597 1187 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 EFNA5P52803 228 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 NFX1Q12986 1120 aaKnown RBP17.54■□□□□ 0.4
SCARB2-210ENST00000638567 PIGHQ14442 188 aaPredicted RBP17.54■□□□□ 0.4
SCARB2-210ENST00000638567 GRIK5Q16478 980 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 NT5DC3Q86UY8 548 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 SLC47A2Q86VL8 602 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 TAAR1Q96RJ0 339 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 MOV10L1Q9BXT6 1211 aaKnown RBP17.54■□□□□ 0.4
SCARB2-210ENST00000638567 WWP1Q9H0M0 922 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 IPO11Q9UI26 975 aaKnown RBP17.54■□□□□ 0.4
SCARB2-210ENST00000638567 XPO7Q9UIA9 1087 aaKnown RBP17.54■□□□□ 0.4
SCARB2-210ENST00000638567 COL5A2P05997 1499 aaPredicted RBP17.54■□□□□ 0.4
SCARB2-210ENST00000638567 CLGNO14967 610 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 CREB3O43889 395 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 TNFAIP2Q03169 654 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 PDE1CQ14123 709 aaPredicted RBP17.54■□□□□ 0.4
SCARB2-210ENST00000638567 EMC2Q15006 297 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 KRT80Q6KB66 452 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 GTF2H1P32780 548 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 KCNA1Q09470 495 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 TAF1BQ53T94 588 aaPredicted RBP17.54■□□□□ 0.4
SCARB2-210ENST00000638567 GPAT2Q6NUI2 795 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 EFHD1Q9BUP0 239 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 IGSF9BQ9UPX0 1349 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 CCDC22O60826 627 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 TTC4O95801 387 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 ENO1P06733 434 aaKnown RBP17.54■□□□□ 0.4
SCARB2-210ENST00000638567 KCNMA1Q12791 1236 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.54■□□□□ 0.4
SCARB2-210ENST00000638567 Q4G0T1 1027 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 ANKRD20A4Q4UJ75 823 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 ANKRD20A8PQ5CZ79 823 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 ANKRD20A2Q5SQ80 823 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 ANKRD20A1Q5TYW2 823 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 BAP1Q92560 729 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 DHX38Q92620 1227 aaKnown RBP17.54■□□□□ 0.4
SCARB2-210ENST00000638567 ANKEF1Q9NU02 776 aa17.54■□□□□ 0.4
SCARB2-210ENST00000638567 SH3BP5O60239 455 aa17.53■□□□□ 0.4
SCARB2-210ENST00000638567 KRT10P13645 584 aa17.53■□□□□ 0.4
SCARB2-210ENST00000638567 OSBPP22059 807 aa17.53■□□□□ 0.4
SCARB2-210ENST00000638567 RFC1P35251 1148 aaPredicted RBP17.53■□□□□ 0.4
SCARB2-210ENST00000638567 SESN2P58004 480 aaPredicted RBP17.53■□□□□ 0.4
SCARB2-210ENST00000638567 AP2B1P63010 937 aa17.53■□□□□ 0.4
SCARB2-210ENST00000638567 SLC26A7Q8TE54 656 aa17.53■□□□□ 0.4
SCARB2-210ENST00000638567 TNFRSF25Q93038 417 aa17.53■□□□□ 0.4
SCARB2-210ENST00000638567 RANBP17Q9H2T7 1088 aaKnown RBP17.53■□□□□ 0.4
SCARB2-210ENST00000638567 ZC3H7BQ9UGR2 993 aaKnown RBP17.53■□□□□ 0.4
SCARB2-210ENST00000638567 CASP5P51878 434 aa17.53■□□□□ 0.4
SCARB2-210ENST00000638567 SNRPFP62306 86 aaKnown RBP17.53■□□□□ 0.4
SCARB2-210ENST00000638567 SKOR1P84550 965 aa17.53■□□□□ 0.4
SCARB2-210ENST00000638567 KIF22Q14807 665 aa17.53■□□□□ 0.4
SCARB2-210ENST00000638567 FSCBQ5H9T9 825 aa17.53■□□□□ 0.4
SCARB2-210ENST00000638567 BTNL9Q6UXG8 535 aa17.53■□□□□ 0.4
SCARB2-210ENST00000638567 AGR3Q8TD06 166 aa17.53■□□□□ 0.4
SCARB2-210ENST00000638567 ALKBH8Q96BT7 664 aaKnown RBP17.53■□□□□ 0.4
SCARB2-210ENST00000638567 PRMT6Q96LA8 375 aaPredicted RBP17.53■□□□□ 0.4
SCARB2-210ENST00000638567 TEX13BQ9BXU2 312 aa17.53■□□□□ 0.4
SCARB2-210ENST00000638567 SIGLEC1Q9BZZ2 1709 aa17.53■□□□□ 0.4
SCARB2-210ENST00000638567 KPNA2P52292 529 aaKnown RBP17.53■□□□□ 0.4
SCARB2-210ENST00000638567 SPATA18Q8TC71 538 aa17.53■□□□□ 0.4
SCARB2-210ENST00000638567 DDX4Q9NQI0 724 aaKnown RBP17.53■□□□□ 0.4
SCARB2-210ENST00000638567 RGS7P49802 495 aa17.52■□□□□ 0.4
SCARB2-210ENST00000638567 RABGAP1LQ5R372 815 aa17.52■□□□□ 0.4
SCARB2-210ENST00000638567 ZNF677Q86XU0 584 aa17.52■□□□□ 0.4
SCARB2-210ENST00000638567 CDKL3Q8IVW4 592 aaPredicted RBP17.52■□□□□ 0.4
SCARB2-210ENST00000638567 RYBPQ8N488 228 aaPredicted RBP17.52■□□□□ 0.4
SCARB2-210ENST00000638567 ATXN7L3BQ96GX2 97 aa17.52■□□□□ 0.4
SCARB2-210ENST00000638567 ACAP3Q96P50 834 aa17.52■□□□□ 0.4
SCARB2-210ENST00000638567 TRIM56Q9BRZ2 755 aaKnown RBP17.52■□□□□ 0.4
SCARB2-210ENST00000638567 IFT172Q9UG01 1749 aa17.52■□□□□ 0.4
SCARB2-210ENST00000638567 GRAP2O75791 330 aa17.52■□□□□ 0.4
SCARB2-210ENST00000638567 ALDH18A1P54886 795 aaKnown RBP17.52■□□□□ 0.4
SCARB2-210ENST00000638567 ZNF200P98182 395 aaPredicted RBP17.52■□□□□ 0.4
SCARB2-210ENST00000638567 PTK7Q13308 1070 aa17.52■□□□□ 0.4
SCARB2-210ENST00000638567 SEZ6Q53EL9 994 aa17.52■□□□□ 0.4
SCARB2-210ENST00000638567 RWDD4Q6NW29 188 aaKnown RBP17.52■□□□□ 0.4
SCARB2-210ENST00000638567 CCNYL1Q8N7R7 359 aa17.52■□□□□ 0.4
SCARB2-210ENST00000638567 PDZD8Q8NEN9 1154 aa17.52■□□□□ 0.4
SCARB2-210ENST00000638567 CENPKQ9BS16 269 aa17.52■□□□□ 0.4
SCARB2-210ENST00000638567 SPC25Q9HBM1 224 aa17.52■□□□□ 0.4
SCARB2-210ENST00000638567 TOPORSQ9NS56 1045 aaPredicted RBP17.52■□□□□ 0.4
SCARB2-210ENST00000638567 FNDC3AQ9Y2H6 1198 aaKnown RBP17.52■□□□□ 0.4
SCARB2-210ENST00000638567 PFDN1O60925 122 aa17.52■□□□□ 0.39
SCARB2-210ENST00000638567 UBOX5O94941 541 aa17.52■□□□□ 0.39
SCARB2-210ENST00000638567 IL1R1P14778 569 aa17.52■□□□□ 0.39
SCARB2-210ENST00000638567 SGSM1Q2NKQ1 1148 aa17.52■□□□□ 0.39
SCARB2-210ENST00000638567 TKFCQ3LXA3 575 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms