RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 MMP19Q99542 508 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 SLC16A3O15427 465 aaKnown RBP9.56□□□□□ -0.88
CSMD1-218ENST00000635120 SERPINB3P29508 390 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 CDC27P30260 824 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 PSMC5P62195 406 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 PTK7Q13308 1070 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 CIAPIN1Q6FI81 312 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 SLC30A9Q6PML9 568 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 CMTM5Q96DZ9 223 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 ATMINO43313 823 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-218ENST00000635120 CAND2O75155 1236 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 LSP1P33241 339 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 GRIK1P39086 918 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 PDAP1Q13442 181 aaKnown RBP9.56□□□□□ -0.88
CSMD1-218ENST00000635120 ASAP3Q8TDY4 903 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 ZNF473Q8WTR7 871 aaKnown RBP9.56□□□□□ -0.88
CSMD1-218ENST00000635120 HPS3Q969F9 1004 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 GIMAP4Q9NUV9 329 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 MAGI3Q5TCQ9 1506 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 REREQ9P2R6 1566 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 IGF2BP3O00425 579 aaKnown RBP eCLIP9.56□□□□□ -0.88
CSMD1-218ENST00000635120 GRAP2O75791 330 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 TMED10P49755 219 aaKnown RBP9.56□□□□□ -0.88
CSMD1-218ENST00000635120 TRIP10Q15642 601 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 TMEM154Q6P9G4 183 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 WRNIP1Q96S55 665 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 A8MXQ7 604 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 GUF1Q8N442 669 aaKnown RBP9.56□□□□□ -0.88
CSMD1-218ENST00000635120 PTPRN2Q92932 1015 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 AGPAT1Q99943 283 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 RALAP11233 206 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 RUNX1T1Q06455 604 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 CCDC15Q0P6D6 951 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 WASHC5Q12768 1159 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 TMEM132DQ14C87 1099 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 DNAL1Q4LDG9 190 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 TRAF7Q6Q0C0 670 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 FOXP4Q8IVH2 680 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-218ENST00000635120 MYH14Q7Z406 1995 aaKnown RBP9.56□□□□□ -0.88
CSMD1-218ENST00000635120 LATS2Q9NRM7 1088 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 NEO1Q92859 1461 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 PPP1R37O75864 691 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 SERPINB1P30740 379 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 SF3B3Q15393 1217 aaKnown RBP9.56□□□□□ -0.88
CSMD1-218ENST00000635120 IYDQ6PHW0 289 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 FOPNLQ96NB1 174 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 C16orf96A6NNT2 1141 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 ARMCX6Q7L4S7 300 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 METTL16Q86W50 562 aaKnown RBP9.56□□□□□ -0.88
CSMD1-218ENST00000635120 SENP7Q9BQF6 1050 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 PIDD1Q9HB75 910 aa9.56□□□□□ -0.88
CSMD1-218ENST00000635120 RFX7Q2KHR2 1363 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 M0R3G1 203 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 HNRNPRO43390 633 aaKnown RBP9.55□□□□□ -0.88
CSMD1-218ENST00000635120 ECE2O60344 883 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 ANGPT1Q15389 498 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 CENPPQ6IPU0 288 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 PRPF18Q99633 342 aaKnown RBP9.55□□□□□ -0.88
CSMD1-218ENST00000635120 TMEM245Q9H330 911 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 GID8Q9NWU2 228 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 C3orf70A6NLC5 250 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-218ENST00000635120 TDP2O95551 362 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 SLC1A1P43005 524 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 RCAN1P53805 252 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 PCSK7Q16549 785 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 QRICH1Q2TAL8 776 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 PID1Q7Z2X4 250 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 MB21D2Q8IYB1 491 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-218ENST00000635120 SEC16BQ96JE7 1060 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 DYRK4Q9NR20 520 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 RAB6BQ9NRW1 208 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 PKP3Q9Y446 797 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 METP08581 1390 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 CCDC88CQ9P219 2028 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 MROH7-TTC4A0A0A0MT08 1334 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.55□□□□□ -0.88
CSMD1-218ENST00000635120 KIF28PB7ZC32 967 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 ZNF189O75820 626 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-218ENST00000635120 MMP10P09238 476 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 SRLQ86TD4 932 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 TTLL6Q8N841 843 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 RANBP17Q9H2T7 1088 aaKnown RBP9.55□□□□□ -0.88
CSMD1-218ENST00000635120 DCP1AQ9NPI6 582 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-218ENST00000635120 APEX2Q9UBZ4 518 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 LRRIQ1Q96JM4 1722 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 ATP6V1B1P15313 513 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 ATP2C1P98194 919 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-218ENST00000635120 BYSLQ13895 437 aaKnown RBP9.55□□□□□ -0.88
CSMD1-218ENST00000635120 LRIG3Q6UXM1 1119 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 DDX53Q86TM3 631 aaKnown RBP9.55□□□□□ -0.88
CSMD1-218ENST00000635120 DNAJC9Q8WXX5 260 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 SEPT3Q9UH03 358 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 CDH16O75309 829 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 CLK1P49759 484 aaKnown RBP9.55□□□□□ -0.88
CSMD1-218ENST00000635120 SHC4Q6S5L8 630 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 SPATA18Q8TC71 538 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 C18orf8Q96DM3 657 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 STK33Q9BYT3 514 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 SLC7A5P2Q9GIP4 190 aa9.55□□□□□ -0.88
CSMD1-218ENST00000635120 CD274Q9NZQ7 290 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms