RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 PPARGC1AQ9UBK2 798 aaKnown RBP6.6□□□□□ -1.35
CDKL5-205ENST00000623535 SCGB2A1O75556 95 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 H2AFZP0C0S5 128 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 RRM1P23921 792 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 SCARF1Q14162 830 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 H2AFVQ71UI9 128 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 BFARQ9NZS9 450 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 CPSF2Q9P2I0 782 aaKnown RBP6.6□□□□□ -1.35
CDKL5-205ENST00000623535 MAD2L2Q9UI95 211 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 NR2F2P24468 414 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 ADORA2BP29275 332 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 TIMM10P62072 90 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 EHHADHQ08426 723 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 BBS9Q3SYG4 887 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 PAN2Q504Q3 1202 aaKnown RBP6.6□□□□□ -1.35
CDKL5-205ENST00000623535 TRIM72Q6ZMU5 477 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 DDX17Q92841 729 aaKnown RBP6.6□□□□□ -1.35
CDKL5-205ENST00000623535 FATE1Q969F0 183 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 FAF2Q96CS3 445 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 GAKO14976 1311 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 ADGRF5Q8IZF2 1346 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 URADA6NGE7 173 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 C1QTNF3-AMACRE9PGA6 284 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 PIK3R2O00459 728 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 MEIS2O14770 477 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 GUCY1B2O75343 617 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 CSF1RP07333 972 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 FNDC3BQ53EP0 1204 aaKnown RBP6.6□□□□□ -1.35
CDKL5-205ENST00000623535 FAM83BQ5T0W9 1011 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 GPR135Q8IZ08 494 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 FIBCD1Q8N539 461 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 DSCC1Q9BVC3 393 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 SLC9A2Q9UBY0 812 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 PRAMEF22A3QJZ6 481 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 RASSF9O75901 435 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 SASH1O94885 1247 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 HMGCS2P54868 508 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 EFL1Q7Z2Z2 1120 aaKnown RBP6.6□□□□□ -1.35
CDKL5-205ENST00000623535 ST13P5Q8NFI4 369 aaPredicted RBP6.6□□□□□ -1.35
CDKL5-205ENST00000623535 COG1Q8WTW3 980 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 TIPINQ9BVW5 301 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 PTCH1Q13635 1447 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 C3orf70A6NLC5 250 aaPredicted RBP6.6□□□□□ -1.35
CDKL5-205ENST00000623535 GAS2O43903 313 aaKnown RBP6.6□□□□□ -1.35
CDKL5-205ENST00000623535 CYP2A6P11509 494 aaPredicted RBP6.6□□□□□ -1.35
CDKL5-205ENST00000623535 CARSP49589 748 aaKnown RBP6.6□□□□□ -1.35
CDKL5-205ENST00000623535 PRELPP51888 382 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 SP3Q02447 781 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 ACSM2AQ08AH3 577 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 UGP2Q16851 508 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 WLSQ5T9L3 541 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 SLC25A24Q6NUK1 477 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 RD3Q7Z3Z2 195 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 ACOX2Q99424 681 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 TMEM245Q9H330 911 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 TAF4O00268 1085 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 OPHN1O60890 802 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 IL18RAPO95256 599 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 DDIT3P35638 169 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 IL2P60568 153 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 STX4Q12846 297 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 MEA1Q16626 185 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 DUOXA2Q1HG44 320 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 STAG1Q8WVM7 1258 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 KRT35Q92764 455 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 C19orf60Q96EN9 201 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 CCDC51Q96ER9 411 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 MTG1Q9BT17 334 aaPredicted RBP6.6□□□□□ -1.35
CDKL5-205ENST00000623535 SENP6Q9GZR1 1112 aaPredicted RBP6.6□□□□□ -1.35
CDKL5-205ENST00000623535 SRGAP2O75044 1071 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 DYNLT1P63172 113 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 MAPRE2Q15555 327 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 E2F4Q16254 413 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 PABPC1LQ4VXU2 614 aaKnown RBP6.6□□□□□ -1.35
CDKL5-205ENST00000623535 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.6□□□□□ -1.35
CDKL5-205ENST00000623535 ZNF614Q8N883 585 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 MGARPQ8TDB4 240 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 DDI1Q8WTU0 396 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 EDC3Q96F86 508 aaKnown RBP6.6□□□□□ -1.35
CDKL5-205ENST00000623535 RAPGEF6Q8TEU7 1601 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 COL17A1Q9UMD9 1497 aaPredicted RBP6.6□□□□□ -1.35
CDKL5-205ENST00000623535 ADH1AP07327 375 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 STAT5BP51692 787 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 POLR2LP62875 67 aaKnown RBP6.6□□□□□ -1.35
CDKL5-205ENST00000623535 RAB30Q15771 203 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 CDK20Q8IZL9 346 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 NARFQ9UHQ1 456 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 AXIN2Q9Y2T1 843 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 RBP5P82980 135 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 KRT71Q3SY84 523 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 ALFQ53S48 1182 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 FAM46CQ5VWP2 391 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 CHSY1Q86X52 802 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 PEX5LQ8IYB4 626 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 REXO4Q9GZR2 422 aaKnown RBP6.6□□□□□ -1.35
CDKL5-205ENST00000623535 FAM207AQ9NSI2 230 aaPredicted RBP6.6□□□□□ -1.35
CDKL5-205ENST00000623535 POLKQ9UBT6 870 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 GTF2A1LQ9UNN4 478 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 A0A1W2PP64 1363 aa6.6□□□□□ -1.35
CDKL5-205ENST00000623535 C2orf81A6NN90 581 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms