RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 NINJ2Q9NZG7 142 aa21.52■■□□□ 1.03
SHKBP1-225ENST00000600733 USTQ9Y2C2 406 aa21.52■■□□□ 1.03
SHKBP1-225ENST00000600733 NEU2Q9Y3R4 380 aa21.52■■□□□ 1.03
SHKBP1-225ENST00000600733 PARP14Q460N5 1801 aa21.51■■□□□ 1.03
SHKBP1-225ENST00000600733 CD58P19256 250 aa21.51■■□□□ 1.03
SHKBP1-225ENST00000600733 RTP1P59025 263 aa21.51■■□□□ 1.03
SHKBP1-225ENST00000600733 ZBTB41Q5SVQ8 909 aa21.51■■□□□ 1.03
SHKBP1-225ENST00000600733 XRRA1Q6P2D8 792 aa21.51■■□□□ 1.03
SHKBP1-225ENST00000600733 ANKRD42Q8N9B4 389 aa21.51■■□□□ 1.03
SHKBP1-225ENST00000600733 TMEM143Q96AN5 459 aa21.51■■□□□ 1.03
SHKBP1-225ENST00000600733 ADAM22Q9P0K1 906 aa21.51■■□□□ 1.03
SHKBP1-225ENST00000600733 SLC9A2Q9UBY0 812 aa21.51■■□□□ 1.03
SHKBP1-225ENST00000600733 AGO2Q9UKV8 859 aaKnown RBP21.51■■□□□ 1.03
SHKBP1-225ENST00000600733 TCP11X1B4DZS4 312 aa21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 DNAJC8O75937 253 aaPredicted RBP21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 FDX1P10109 184 aa21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 SSR1P43307 286 aaKnown RBP21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 BPIFB4P59827 614 aa21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 NOMO3P69849 1222 aa21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 MAMLD1Q13495 774 aa21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 CRELD2Q6UXH1 353 aaPredicted RBP21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 NSRP1Q9H0G5 558 aaKnown RBP21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 KCNK9Q9NPC2 374 aa21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 ABCF3Q9NUQ8 709 aa21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 FGFR1OP2Q9NVK5 253 aa21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 KLHL11Q9NVR0 708 aa21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 TBK1Q9UHD2 729 aa21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 PCDHB4Q9Y5E5 795 aa21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 MYH9P35579 1960 aaKnown RBP21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 ZNF541Q9H0D2 1346 aa21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 MAFGO15525 162 aa21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 SNX3O60493 162 aa21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 GH1P01241 217 aa21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 CETPP11597 493 aa21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 GNA15P30679 374 aa21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 ENPEPQ07075 957 aa21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 CUL2Q13617 745 aa21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 MPP2Q14168 576 aa21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 TRPM8Q7Z2W7 1104 aa21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 RHOT1Q8IXI2 618 aa21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 CYP4X1Q8N118 509 aa21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 ZKSCAN4Q969J2 545 aaPredicted RBP21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 OSBPL8Q9BZF1 889 aa21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 GGT7Q9UJ14 662 aa21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 SLC12A4Q9UP95 1085 aa21.5■■□□□ 1.03
SHKBP1-225ENST00000600733 CHUKO15111 745 aa21.49■■□□□ 1.03
SHKBP1-225ENST00000600733 PTP4A2Q12974 167 aa21.49■■□□□ 1.03
SHKBP1-225ENST00000600733 FAM133BQ5BKY9 247 aaKnown RBP21.49■■□□□ 1.03
SHKBP1-225ENST00000600733 SCARA3Q6AZY7 606 aa21.49■■□□□ 1.03
SHKBP1-225ENST00000600733 NSUN6Q8TEA1 469 aaKnown RBP21.49■■□□□ 1.03
SHKBP1-225ENST00000600733 PSTPIP1O43586 416 aa21.49■■□□□ 1.03
SHKBP1-225ENST00000600733 DKC1O60832 514 aaKnown RBP eCLIP21.49■■□□□ 1.03
SHKBP1-225ENST00000600733 EMC2Q15006 297 aa21.49■■□□□ 1.03
SHKBP1-225ENST00000600733 LIN9Q5TKA1 542 aa21.49■■□□□ 1.03
SHKBP1-225ENST00000600733 ABHD15Q6UXT9 468 aa21.49■■□□□ 1.03
SHKBP1-225ENST00000600733 SEPT14Q6ZU15 432 aa21.49■■□□□ 1.03
SHKBP1-225ENST00000600733 ZNF365Q70YC5 407 aa21.49■■□□□ 1.03
SHKBP1-225ENST00000600733 FAM228AQ86W67 206 aa21.49■■□□□ 1.03
SHKBP1-225ENST00000600733 ABRAQ8N0Z2 381 aa21.49■■□□□ 1.03
SHKBP1-225ENST00000600733 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.49■■□□□ 1.03
SHKBP1-225ENST00000600733 GDAP1Q8TB36 358 aa21.49■■□□□ 1.03
SHKBP1-225ENST00000600733 ZNF526Q8TF50 670 aaPredicted RBP21.49■■□□□ 1.03
SHKBP1-225ENST00000600733 C9orf72Q96LT7 481 aa21.49■■□□□ 1.03
SHKBP1-225ENST00000600733 KIAA1586Q9HCI6 787 aa21.49■■□□□ 1.03
SHKBP1-225ENST00000600733 RBAKQ9NYW8 714 aaPredicted RBP21.49■■□□□ 1.03
SHKBP1-225ENST00000600733 ANKFY1Q9P2R3 1169 aa21.49■■□□□ 1.03
SHKBP1-225ENST00000600733 POLGP54098 1239 aaPredicted RBP21.48■■□□□ 1.03
SHKBP1-225ENST00000600733 CAV1Q03135 178 aa21.48■■□□□ 1.03
SHKBP1-225ENST00000600733 ADCY1Q08828 1119 aa21.48■■□□□ 1.03
SHKBP1-225ENST00000600733 STRN3Q13033 797 aa21.48■■□□□ 1.03
SHKBP1-225ENST00000600733 SNCBQ16143 134 aa21.48■■□□□ 1.03
SHKBP1-225ENST00000600733 CCNG2Q16589 344 aa21.48■■□□□ 1.03
SHKBP1-225ENST00000600733 IZUMO3Q5VZ72 239 aa21.48■■□□□ 1.03
SHKBP1-225ENST00000600733 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.48■■□□□ 1.03
SHKBP1-225ENST00000600733 PLCD3Q8N3E9 789 aa21.48■■□□□ 1.03
SHKBP1-225ENST00000600733 TPX2Q9ULW0 747 aaKnown RBP21.48■■□□□ 1.03
SHKBP1-225ENST00000600733 TLR3O15455 904 aaKnown RBP21.48■■□□□ 1.03
SHKBP1-225ENST00000600733 BRAFP15056 766 aa21.48■■□□□ 1.03
SHKBP1-225ENST00000600733 ATP5DP30049 168 aa21.48■■□□□ 1.03
SHKBP1-225ENST00000600733 ATP13A4Q4VNC1 1196 aa21.48■■□□□ 1.03
SHKBP1-225ENST00000600733 CIAPIN1Q6FI81 312 aa21.48■■□□□ 1.03
SHKBP1-225ENST00000600733 REPS2Q8NFH8 660 aa21.48■■□□□ 1.03
SHKBP1-225ENST00000600733 ASAP3Q8TDY4 903 aa21.48■■□□□ 1.03
SHKBP1-225ENST00000600733 LRRIQ4A6NIV6 560 aa21.47■■□□□ 1.03
SHKBP1-225ENST00000600733 OAS1P00973 400 aaKnown RBP21.47■■□□□ 1.03
SHKBP1-225ENST00000600733 TCF4P15884 667 aa21.47■■□□□ 1.03
SHKBP1-225ENST00000600733 NF2P35240 595 aa21.47■■□□□ 1.03
SHKBP1-225ENST00000600733 BACE1P56817 501 aa21.47■■□□□ 1.03
SHKBP1-225ENST00000600733 TNFAIP1Q13829 316 aa21.47■■□□□ 1.03
SHKBP1-225ENST00000600733 SEZ6Q53EL9 994 aa21.47■■□□□ 1.03
SHKBP1-225ENST00000600733 NUGGCQ68CJ6 796 aa21.47■■□□□ 1.03
SHKBP1-225ENST00000600733 KATNAL2Q8IYT4 538 aa21.47■■□□□ 1.03
SHKBP1-225ENST00000600733 CCDC89Q8N998 374 aa21.47■■□□□ 1.03
SHKBP1-225ENST00000600733 RBBP8NLQ8NC74 664 aaPredicted RBP21.47■■□□□ 1.03
SHKBP1-225ENST00000600733 ZNF214Q9UL59 606 aaPredicted RBP21.47■■□□□ 1.03
SHKBP1-225ENST00000600733 FZD1Q9UP38 647 aa21.47■■□□□ 1.03
SHKBP1-225ENST00000600733 NUB1Q9Y5A7 615 aa21.47■■□□□ 1.03
SHKBP1-225ENST00000600733 TNS1Q9HBL0 1735 aaKnown RBP21.47■■□□□ 1.03
SHKBP1-225ENST00000600733 PI4K2BG5E9Z4 385 aa21.46■■□□□ 1.03
SHKBP1-225ENST00000600733 RPL7AP62424 266 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms