RNA–Protein interactions for RNA: ENST00000599040.5

FARP1-226, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-226ENST00000599040 SCFD1Q8WVM8 642 aa10.17□□□□□ -0.78
FARP1-226ENST00000599040 AUTS2Q8WXX7 1259 aa10.17□□□□□ -0.78
FARP1-226ENST00000599040 HPS3Q969F9 1004 aa10.17□□□□□ -0.78
FARP1-226ENST00000599040 PBXIP1Q96AQ6 731 aa10.17□□□□□ -0.78
FARP1-226ENST00000599040 CPB2Q96IY4 423 aa10.17□□□□□ -0.78
FARP1-226ENST00000599040 CNOT6LQ96LI5 555 aaKnown RBP10.17□□□□□ -0.78
FARP1-226ENST00000599040 RPS6KC1Q96S38 1066 aa10.17□□□□□ -0.78
FARP1-226ENST00000599040 GAD1Q99259 594 aa10.17□□□□□ -0.78
FARP1-226ENST00000599040 ADPGKQ9BRR6 497 aa10.17□□□□□ -0.78
FARP1-226ENST00000599040 HERC2P3Q9BVR0 1158 aa10.17□□□□□ -0.78
FARP1-226ENST00000599040 COLEC11Q9BWP8 271 aa10.17□□□□□ -0.78
FARP1-226ENST00000599040 EIF2AQ9BY44 585 aaKnown RBP10.17□□□□□ -0.78
FARP1-226ENST00000599040 TRAF3IP3Q9Y228 551 aa10.17□□□□□ -0.78
FARP1-226ENST00000599040 USTQ9Y2C2 406 aa10.17□□□□□ -0.78
FARP1-226ENST00000599040 FRMD4BQ9Y2L6 1034 aa10.17□□□□□ -0.78
FARP1-226ENST00000599040 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.17□□□□□ -0.789e-7■■□□□ 13
FARP1-226ENST00000599040 ZDBF2Q9HCK1 2354 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 ZNF318Q5VUA4 2279 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 A0A1B0GTH6 734 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 A0A1B0GUA9 196 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 SLC16A3O15427 465 aaKnown RBP10.16□□□□□ -0.78
FARP1-226ENST00000599040 DDHD2O94830 711 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 PRPF6O94906 941 aaKnown RBP10.16□□□□□ -0.78
FARP1-226ENST00000599040 MYBP10242 640 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 NR2F2P24468 414 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 NMT1P30419 496 aaKnown RBP10.16□□□□□ -0.78
FARP1-226ENST00000599040 GLUD2P49448 558 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 SCNN1GP51170 649 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 EFNA5P52803 228 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 COPB1P53618 953 aaKnown RBP10.16□□□□□ -0.78
FARP1-226ENST00000599040 NCKAP1LP55160 1127 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 PEX3P56589 373 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 UBXN1Q04323 297 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 GRIK3Q13003 919 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 MTMR3Q13615 1198 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 KRT31Q15323 416 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 NFIL3Q16649 462 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 MAPK6Q16659 721 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 AMHR2Q16671 573 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 MAN2A1Q16706 1144 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 FAM187BQ17R55 369 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 CDCA2Q69YH5 1023 aaPredicted RBP10.16□□□□□ -0.78
FARP1-226ENST00000599040 SPECC1LQ69YQ0 1117 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 HAUS6Q7Z4H7 955 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 UBALD2Q8IYN6 164 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 ACSF2Q96CM8 615 aaPredicted RBP10.16□□□□□ -0.78
FARP1-226ENST00000599040 BICD1Q96G01 975 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 FBXL18Q96ME1 805 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 PCMTD1Q96MG8 357 aaPredicted RBP10.16□□□□□ -0.78
FARP1-226ENST00000599040 DUSP9Q99956 384 aaKnown RBP10.16□□□□□ -0.78
FARP1-226ENST00000599040 TUBGCP2Q9BSJ2 902 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 APOL6Q9BWW8 343 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 VPS16Q9H269 839 aa10.16□□□□□ -0.78
FARP1-226ENST00000599040 NXF3Q9H4D5 531 aaKnown RBP10.16□□□□□ -0.78
FARP1-226ENST00000599040 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.16□□□□□ -0.78
FARP1-226ENST00000599040 PRG3Q9Y2Y8 225 aaPredicted RBP10.16□□□□□ -0.78
FARP1-226ENST00000599040 LRRC10BA6NIK2 292 aa10.15□□□□□ -0.78
FARP1-226ENST00000599040 NPTXRO95502 500 aa10.15□□□□□ -0.78
FARP1-226ENST00000599040 C1RP00736 705 aa10.15□□□□□ -0.78
FARP1-226ENST00000599040 CNPP09543 421 aaKnown RBP10.15□□□□□ -0.78
FARP1-226ENST00000599040 KRT13P13646 458 aa10.15□□□□□ -0.78
FARP1-226ENST00000599040 EPCAMP16422 314 aa10.15□□□□□ -0.78
FARP1-226ENST00000599040 PSMC2P35998 433 aaKnown RBP10.15□□□□□ -0.78
FARP1-226ENST00000599040 NAMPTP43490 491 aa10.15□□□□□ -0.78
FARP1-226ENST00000599040 CLCN4P51793 760 aa10.15□□□□□ -0.78
FARP1-226ENST00000599040 GTF2BQ00403 316 aa10.15□□□□□ -0.78
FARP1-226ENST00000599040 DSC1Q08554 894 aa10.15□□□□□ -0.78
FARP1-226ENST00000599040 PRPF4BQ13523 1007 aaKnown RBP10.15□□□□□ -0.78
FARP1-226ENST00000599040 USP41Q3LFD5 358 aa10.15□□□□□ -0.78
FARP1-226ENST00000599040 CYP26C1Q6V0L0 522 aa10.15□□□□□ -0.78
FARP1-226ENST00000599040 C15orf39Q6ZRI6 1047 aa10.15□□□□□ -0.78
FARP1-226ENST00000599040 CCDC149Q6ZUS6 474 aa10.15□□□□□ -0.78
FARP1-226ENST00000599040 COLGALT2Q8IYK4 626 aa10.15□□□□□ -0.78
FARP1-226ENST00000599040 GPR65Q8IYL9 337 aa10.15□□□□□ -0.78
FARP1-226ENST00000599040 ZDHHC14Q8IZN3 488 aa10.15□□□□□ -0.78
FARP1-226ENST00000599040 FBXL6Q8N531 539 aa10.15□□□□□ -0.78
FARP1-226ENST00000599040 ZNF397Q8NF99 534 aaPredicted RBP10.15□□□□□ -0.78
FARP1-226ENST00000599040 SLC22A17Q8WUG5 538 aa10.15□□□□□ -0.78
FARP1-226ENST00000599040 BCL7CQ8WUZ0 217 aaPredicted RBP10.15□□□□□ -0.78
FARP1-226ENST00000599040 KLHL5Q96PQ7 755 aa10.15□□□□□ -0.78
FARP1-226ENST00000599040 NTPCRQ9BSD7 190 aaKnown RBP10.15□□□□□ -0.78
FARP1-226ENST00000599040 MKNK1Q9BUB5 465 aa10.15□□□□□ -0.78
FARP1-226ENST00000599040 NUP58Q9BVL2 599 aa10.15□□□□□ -0.78
FARP1-226ENST00000599040 KCTD10Q9H3F6 313 aa10.15□□□□□ -0.78
FARP1-226ENST00000599040 POMKQ9H5K3 350 aa10.15□□□□□ -0.78
FARP1-226ENST00000599040 RTN4Q9NQC3 1192 aaKnown RBP10.15□□□□□ -0.78
FARP1-226ENST00000599040 TAB2Q9NYJ8 693 aa10.15□□□□□ -0.78
FARP1-226ENST00000599040 PARP2Q9UGN5 583 aa10.15□□□□□ -0.78
FARP1-226ENST00000599040 ARMCX3Q9UH62 379 aaPredicted RBP10.15□□□□□ -0.78
FARP1-226ENST00000599040 SORCS3Q9UPU3 1222 aa10.15□□□□□ -0.78
FARP1-226ENST00000599040 HES2Q9Y543 173 aa10.15□□□□□ -0.78
FARP1-226ENST00000599040 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.15□□□□□ -0.78
FARP1-226ENST00000599040 SF3B1O75533 1304 aaKnown RBP eCLIP10.14□□□□□ -0.79
FARP1-226ENST00000599040 ITIH6Q6UXX5 1313 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 LGALS16A8MUM7 142 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 C2CD2LO14523 706 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 KIAA0391O15091 583 aaKnown RBP10.14□□□□□ -0.79
FARP1-226ENST00000599040 SLC16A4O15374 487 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 B4GALT5O43286 388 aa10.14□□□□□ -0.79
FARP1-226ENST00000599040 AP5Z1O43299 807 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms