RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 IDEP14735 1019 aa11.43□□□□□ -0.58
CCDC9-203ENST00000596938 AARSP49588 968 aaKnown RBP eCLIP11.43□□□□□ -0.58
CCDC9-203ENST00000596938 ACOT2P49753 483 aa11.43□□□□□ -0.58
CCDC9-203ENST00000596938 SPAG1Q07617 926 aa11.43□□□□□ -0.58
CCDC9-203ENST00000596938 KCNA1Q09470 495 aa11.43□□□□□ -0.58
CCDC9-203ENST00000596938 PPM1LQ5SGD2 360 aa11.43□□□□□ -0.58
CCDC9-203ENST00000596938 L1TD1Q5T7N2 865 aaKnown RBP11.43□□□□□ -0.58
CCDC9-203ENST00000596938 FOXD4L5Q5VV16 416 aaPredicted RBP11.43□□□□□ -0.58
CCDC9-203ENST00000596938 TPGS2Q68CL5 300 aa11.43□□□□□ -0.58
CCDC9-203ENST00000596938 CNNM4Q6P4Q7 775 aa11.43□□□□□ -0.58
CCDC9-203ENST00000596938 CCDC65Q8IXS2 484 aa11.43□□□□□ -0.58
CCDC9-203ENST00000596938 BEST2Q8NFU1 509 aa11.43□□□□□ -0.58
CCDC9-203ENST00000596938 FOXD4L4Q8WXT5 416 aaPredicted RBP11.43□□□□□ -0.58
CCDC9-203ENST00000596938 NXPE3Q969Y0 559 aa11.43□□□□□ -0.58
CCDC9-203ENST00000596938 OXCT2Q9BYC2 517 aaPredicted RBP11.43□□□□□ -0.58
CCDC9-203ENST00000596938 KCNK12Q9HB15 430 aa11.43□□□□□ -0.58
CCDC9-203ENST00000596938 IGSF9Q9P2J2 1179 aa11.43□□□□□ -0.58
CCDC9-203ENST00000596938 PCDHB8Q9UN66 801 aa11.43□□□□□ -0.58
CCDC9-203ENST00000596938 ZFP37Q9Y6Q3 630 aaPredicted RBP11.43□□□□□ -0.58
CCDC9-203ENST00000596938 ANO9A1A5B4 782 aa11.42□□□□□ -0.58
CCDC9-203ENST00000596938 TISP43B9A030 160 aa11.42□□□□□ -0.58
CCDC9-203ENST00000596938 PIRO00625 290 aa11.42□□□□□ -0.58
CCDC9-203ENST00000596938 GCNT3O95395 438 aa11.42□□□□□ -0.58
CCDC9-203ENST00000596938 ASGR2P07307 311 aa11.42□□□□□ -0.58
CCDC9-203ENST00000596938 ATF2P15336 505 aa11.42□□□□□ -0.58
CCDC9-203ENST00000596938 GARTP22102 1010 aa11.42□□□□□ -0.58
CCDC9-203ENST00000596938 MCM4P33991 863 aa11.42□□□□□ -0.58
CCDC9-203ENST00000596938 ROR1Q01973 937 aa11.42□□□□□ -0.58
CCDC9-203ENST00000596938 TDGQ13569 410 aa11.42□□□□□ -0.58
CCDC9-203ENST00000596938 PKP1Q13835 747 aa11.42□□□□□ -0.58
CCDC9-203ENST00000596938 JADE1Q6IE81 842 aa11.42□□□□□ -0.58
CCDC9-203ENST00000596938 CRELD2Q6UXH1 353 aaPredicted RBP11.42□□□□□ -0.58
CCDC9-203ENST00000596938 GRASPQ7Z6J2 395 aaPredicted RBP11.42□□□□□ -0.58
CCDC9-203ENST00000596938 TCEAL8Q8IYN2 117 aa11.42□□□□□ -0.58
CCDC9-203ENST00000596938 SLC7A14Q8TBB6 771 aa11.42□□□□□ -0.58
CCDC9-203ENST00000596938 POMGNT1Q8WZA1 660 aa11.42□□□□□ -0.58
CCDC9-203ENST00000596938 FAM212AQ96EL1 285 aa11.42□□□□□ -0.58
CCDC9-203ENST00000596938 TRIM9Q9C026 710 aa11.42□□□□□ -0.58
CCDC9-203ENST00000596938 IKZF4Q9H2S9 585 aa11.42□□□□□ -0.58
CCDC9-203ENST00000596938 TMEM206Q9H813 350 aa11.42□□□□□ -0.58
CCDC9-203ENST00000596938 TBC1D7Q9P0N9 293 aa11.42□□□□□ -0.58
CCDC9-203ENST00000596938 FBXL5Q9UKA1 691 aa11.42□□□□□ -0.58
CCDC9-203ENST00000596938 PCDHA7Q9UN72 937 aa11.42□□□□□ -0.58
CCDC9-203ENST00000596938 C2CD2Q9Y426 696 aa11.42□□□□□ -0.58
CCDC9-203ENST00000596938 TDRD15B5MCY1 1934 aaKnown RBP11.41□□□□□ -0.58
CCDC9-203ENST00000596938 ARHGEF37A1IGU5 675 aa11.41□□□□□ -0.58
CCDC9-203ENST00000596938 IL18RAPO95256 599 aa11.41□□□□□ -0.58
CCDC9-203ENST00000596938 LDHAP00338 332 aaKnown RBP11.41□□□□□ -0.58
CCDC9-203ENST00000596938 LAMP2P13473 410 aa11.41□□□□□ -0.58
CCDC9-203ENST00000596938 TYMPP19971 482 aa11.41□□□□□ -0.58
CCDC9-203ENST00000596938 FSHRP23945 695 aa11.41□□□□□ -0.58
CCDC9-203ENST00000596938 GBP2P32456 591 aaPredicted RBP11.41□□□□□ -0.58
CCDC9-203ENST00000596938 ELF1P32519 619 aa11.41□□□□□ -0.58
CCDC9-203ENST00000596938 ME1P48163 572 aa11.41□□□□□ -0.58
CCDC9-203ENST00000596938 CASP5P51878 434 aa11.41□□□□□ -0.58
CCDC9-203ENST00000596938 LILRA4P59901 499 aa11.41□□□□□ -0.58
CCDC9-203ENST00000596938 YWHAHQ04917 246 aaPredicted RBP11.41□□□□□ -0.58
CCDC9-203ENST00000596938 TMEM132DQ14C87 1099 aa11.41□□□□□ -0.58
CCDC9-203ENST00000596938 FOXD4L6Q3SYB3 417 aaPredicted RBP11.41□□□□□ -0.58
CCDC9-203ENST00000596938 CTXN3Q4LDR2 81 aa11.41□□□□□ -0.58
CCDC9-203ENST00000596938 C9orf57Q5W0N0 161 aa11.41□□□□□ -0.58
CCDC9-203ENST00000596938 RESP18Q5W5W9 173 aa11.41□□□□□ -0.58
CCDC9-203ENST00000596938 FOXD4L3Q6VB84 417 aaPredicted RBP11.41□□□□□ -0.58
CCDC9-203ENST00000596938 NT5DC4Q86YG4 428 aa11.41□□□□□ -0.58
CCDC9-203ENST00000596938 SYCP3Q8IZU3 236 aa11.41□□□□□ -0.58
CCDC9-203ENST00000596938 FBXL6Q8N531 539 aa11.41□□□□□ -0.58
CCDC9-203ENST00000596938 SPRYD3Q8NCJ5 442 aa11.41□□□□□ -0.58
CCDC9-203ENST00000596938 DHX58Q96C10 678 aa11.41□□□□□ -0.58
CCDC9-203ENST00000596938 MYADMQ96S97 322 aa11.41□□□□□ -0.58
CCDC9-203ENST00000596938 C7orf25Q9BPX7 421 aa11.41□□□□□ -0.58
CCDC9-203ENST00000596938 PYM1Q9BRP8 204 aaKnown RBP11.41□□□□□ -0.58
CCDC9-203ENST00000596938 MAGEF1Q9HAY2 307 aa11.41□□□□□ -0.58
CCDC9-203ENST00000596938 FAM13BQ9NYF5 915 aa11.41□□□□□ -0.58
CCDC9-203ENST00000596938 KCNH3Q9ULD8 1083 aa11.41□□□□□ -0.58
CCDC9-203ENST00000596938 WDFY4Q6ZS81 3184 aa11.4□□□□□ -0.58
CCDC9-203ENST00000596938 WDR27A2RRH5 827 aa11.4□□□□□ -0.58
CCDC9-203ENST00000596938 OR6C75A6NL08 312 aa11.4□□□□□ -0.58
CCDC9-203ENST00000596938 ANHXE9PGG2 379 aa11.4□□□□□ -0.58
CCDC9-203ENST00000596938 KIAA0391O15091 583 aaKnown RBP11.4□□□□□ -0.58
CCDC9-203ENST00000596938 CCL16O15467 120 aa11.4□□□□□ -0.58
CCDC9-203ENST00000596938 POLR2DO15514 142 aaKnown RBP11.4□□□□□ -0.58
CCDC9-203ENST00000596938 NFICP08651 508 aa11.4□□□□□ -0.58
CCDC9-203ENST00000596938 GUCY2FP51841 1108 aa11.4□□□□□ -0.58
CCDC9-203ENST00000596938 DNM1Q05193 864 aaKnown RBP11.4□□□□□ -0.58
CCDC9-203ENST00000596938 ZNF280DQ6N043 979 aa11.4□□□□□ -0.58
CCDC9-203ENST00000596938 DSTYKQ6XUX3 929 aa11.4□□□□□ -0.58
CCDC9-203ENST00000596938 STXBP4Q6ZWJ1 553 aa11.4□□□□□ -0.58
CCDC9-203ENST00000596938 SUGP1Q8IWZ8 645 aaKnown RBP11.4□□□□□ -0.58
CCDC9-203ENST00000596938 TMEM130Q8N3G9 435 aa11.4□□□□□ -0.58
CCDC9-203ENST00000596938 SLC44A3Q8N4M1 653 aa11.4□□□□□ -0.58
CCDC9-203ENST00000596938 FAM213AQ9BRX8 229 aa11.4□□□□□ -0.58
CCDC9-203ENST00000596938 FGFBP2Q9BYJ0 223 aa11.4□□□□□ -0.58
CCDC9-203ENST00000596938 AVENQ9NQS1 362 aaPredicted RBP11.4□□□□□ -0.58
CCDC9-203ENST00000596938 DNMT3BQ9UBC3 853 aaKnown RBP11.4□□□□□ -0.58
CCDC9-203ENST00000596938 AFF4Q9UHB7 1163 aaKnown RBP11.4□□□□□ -0.58
CCDC9-203ENST00000596938 CDH7Q9ULB5 785 aa11.4□□□□□ -0.58
CCDC9-203ENST00000596938 PRRG1O14668 218 aa11.39□□□□□ -0.59
CCDC9-203ENST00000596938 SPTLC1O15269 473 aa11.39□□□□□ -0.59
CCDC9-203ENST00000596938 EIF3DO15371 548 aaKnown RBP eCLIP11.39□□□□□ -0.59
CCDC9-203ENST00000596938 EXTL3O43909 919 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms